Zonotrichia albicollis (white-throated sparrow): 102062006
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Entry
102062006 CDS
T07911
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03022
Basal transcription factors
zab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102062006 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
102062006 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zab03021
]
102062006 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
zab03400
]
102062006 (GTF2H1)
Transcription machinery [BR:
zab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102062006 (GTF2H1)
DNA repair and recombination proteins [BR:
zab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102062006 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
102062006
NCBI-ProteinID:
XP_005486652
Ensembl:
ENSZALG00000016950
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPNKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQSHYFHRDRLNTGSKD
LFAECAKLDEKGLKAMVSQGVKNPLIDLTALEDKTLDEGYGVASVASTSNASKSARESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSDVFQPPLKKVKLQEAIEY
EDLSKNNSVKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFQSIRQEMEAYVPKLTQ
VLSSGDAASTIAVLSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKFHTWQ
SRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcgtcggaagaagtgctgctgatagtgaagaaggtgcgtcagaagaagcag
gatggggccctgtacctgatggccgaacgaattgcctgggctcccgagggcaaggaccgc
ttcaccgtcagccacatgtatgcagacatcaaatgccagaaaatcagtccagaaggtaaa
gctaaaattcagctgcagctggtattgcatgcaggggacacaaccaacttccacttctcc
aatgaaagcacagcagtgaaggagcgagatgcggtcaaggatcttctacaacagctcttg
cccaagttcaaaaggaaagctaataaagaacttgaggagaagaacagaatgctgcaagaa
gatcctgttttgtttcagctctataaagaccttgttgtgagccaagtaatcagtgctgaa
gaattctgggccaaccgtttaagcctgaatgcaggggataattctgcagcacctaataaa
caagatgtgggcatctctgcagcattcctggctgatgtacggcctcagacagacggctgc
aacgggctgaggtacaacctgacttcagatattatcgaatccatatttcggacataccct
gcagtaaaaatgaaatatgcagagaatgttccacataacatgactgagagggaattctgg
acacgattttttcagtctcattattttcatcgggacaggctcaatacaggctcaaaagac
ctctttgcagaatgtgccaaactggatgagaaagggttaaaagcaatggtgtctcaagga
gtgaaaaaccctctgatagatttaacagctttggaagataaaacattagatgaaggctat
ggtgttgcttctgtggcctctacatcaaatgcctcaaagtctgctagagaaagcagcaat
gctgccatcataaaacgctttaaccatcatagtgccatggtccttgcagctggcctcagg
aaacaagaagcacaaaatgaccattacagtgagaccagcagtacggatggaaactccagg
gattcagatgtctttcagccaccactgaaaaaggtaaaactgcaggaggccattgaatac
gaagatttatcaaagaataatagcgttaaaactattgcactaaacttaaagaagtctgat
aggtattaccatggtccaactccaattcaatcacagcaatatgcaactagtcaggatata
attaattcatttcagagtattagacaagaaatggaagcatatgtacccaaactaactcag
gttctttccagtggtgatgctgccagcactattgcagtcctgtcacctggaggagcactt
atgcagggtggaacacagcaagccataaaccagatggtgccaaatgacattcagtctgaa
ctaaaacacttgtatgtggcagtaggggaactgctaagacacttctggtcctgcttccct
gttaacacgccattcctagaagaaaaggttgtgaaaatgaggagcaacttggaaagattt
caggttacaaagctctgcccattccaagaaaagattcggagacaatatttaagcacaaat
ctggtaagtcatatagaagagatgctgcagacagcctacaataagttccacacgtggcag
tcgcggcgcatgctgaagaagacgtga
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