Zonotrichia albicollis (white-throated sparrow): 102062191
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Entry
102062191 CDS
T07911
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zab03036
]
102062191 (SHOC1)
Chromosome and associated proteins [BR:
zab03036
]
Eukaryotic type
Meiosis-specific proteins
Others
102062191 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
102062191
NCBI-ProteinID:
XP_026652909
LinkDB
All DBs
Position
Unknown
AA seq
1463 aa
AA seq
DB search
MLRISQNKMFAALKYHSTDYLYESMARQKFSIWKLSLCFPPCLHQDEKYHLNGLFADDKY
RKPWTRIGSTQNMMAISVLDQWKRSLPVEDFLEKKPISSVEFQSSNDLIEVIPSSNPCSQ
TDTEESFLLMKNGFKEDSTQDKYLKIYYATEFKEPQQDLCLEEEFVFIDNLESFRKKMPN
LSILLSRLQFFLVKDPLLDSEGQFLTAENIFRECLTFQNGMKMEESQNDLQGIKESFCTV
SIKDEEYFLLPVDLELSKPKSGRSVTVPSYLELKEVLNLAPVTVDDEDLCKQVIREDLKA
EITCKIEISKYCAIPQEICSSISTSMLEFCESAEYIPYLKDEMEVPLTPPCRQQRSWVNF
LCRGLQEEPISLSGNSILIAEPSREFLESLVWQSEKYRDNMSSLLLVEHPAVNLAHQHHS
LRELKKKLLLEVEAPMLGSLEEGWWLHRVLNPAAVEILEQFNMDGSNANSLLPTEVETFT
QFTTYKLERWLEEKNCVTNQELLSAEGHSSEKVVNPDLSLQIQRQNFAVSALSPAKIHST
NTSVAELTGGSISKIKTEEAIYFLNQEKKTPEPFESDSCKDVSSKLDKSSCSGKPASLAL
ASKWANDDSDLNNFIMMRSKYTVTQREDKYYVDRPEKGVQPEDQHINILKEDNSFCETVK
TEENTQENKDSITINIQPSESQCQAYCLLEEAAIPVLKDLTHLGVLASVTWSFDSVKIDH
TRFFLKQQEKVIYDNFKQGKVDEKEILLFRHAALVHVLVTVRDLLLTCGWDTALGYLSKA
KDIYKNILESCLNNIWRQLKIVQYSSQKKHETHPKITALQCEMLNWMKSCGEKHSVKVLI
ITRMDSEREKDAFIHPLSRIEGLKAVDLNSEKKGSPLSCKEIISNLSRYSCIIVHNQQIR
ADFPWTHFSLVMEYDYSENSGWKNLCKNLNVTYMTFKTTFPETRQMRNHGGSFLLEVQIP
YVFLTTEGLLNMPDILQLFESKYSITFVERSSSYSLRLFGSADQYVVLTVDECTAIFLQS
VEELNYEDFCDTVISRLMALSLQYMCCWIIFYSKERLSLEYSLKGNTLLNLVLIYATVIE
LTQKSEDFEVKVVLTPGIEETALVIRQIADNVLIASNISPHEWLDKSWLSILPSEPEKCL
LTFPCINPLVAQFMLKKGLSLNRLFLASFDQLQELLPQAPKKVLKHFSDMISSYSLNAAA
LEKTVKGASHPENQNKVNTLYLDNKQNCQILELLDKAQNSTGPSRMNAEALNPPLNYHKG
FLKSDLPSCMQKKACSSDVITRRKLNFFAVSKDNEDFAHPEVKNSLHVQRQPFRMHNSSD
HSSKDSEKQDFFAAFSDCAPQESSKSFLDEFRDTTFKSPEIQIDQSLWNDSSSTGPHNSF
AHDGFLSDFFDDTNELQNLNFSQIGETPKGKRKKRPPFLWTKEKIKTDSGFPELQEFKKR
KLTYERVPGRRDGQTRLKFFSAK
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaatatcacaaaacaagatgtttgcagctttgaagtatcactcaacagactat
ttatacgagagcatggcaaggcagaagttttccatctggaaattatccctttgctttcct
ccctgtttgcatcaagatgaaaagtatcatctcaatggactctttgctgatgataagtat
aggaagccatggactagaattggttcaacacagaacatgatggctatttcagtattggat
caatggaagagaagtttacctgtggaggatttcctggaaaagaaacctatctcctctgta
gagtttcagagtagtaatgatttaatagaagttattccaagttcaaatccttgctctcag
actgacacagaagaatcttttttacttatgaagaatggttttaaggaagactccacccaa
gacaaatatttgaagatctattatgccactgaatttaaagaaccacaacaagatttgtgt
ctggaagaggagtttgtttttattgacaatcttgaaagttttcgtaaaaaaatgccaaat
ttatctatacttctgagcagactacagttttttttagtgaaagatccccttttggattct
gaaggacagtttttaacagcagagaatattttcagagaatgtttgactttccaaaatgga
atgaagatggaagaaagtcaaaatgatttgcaggggattaaagagagtttctgtactgta
tctataaaagatgaagagtatttcctgttgcctgttgatttagaattgagcaaacctaag
agtggcagatctgtgacagttccatcatacttggaactaaaggaggtgttaaatttagct
ccagtcactgtagatgatgaagacctttgcaaacaagtgatcagagaagatctcaaagca
gaaattacatgcaaaatagaaatttccaagtactgtgccattccacaagagatttgctcc
agtattagcacaagtatgttggaattctgtgagtcagctgaatacattccatatttgaaa
gatgaaatggaagtgcctttaactcctccatgcagacaacaaagatcatgggttaatttt
ctgtgcagaggacttcaagaagaacctatttctctctctggtaacagtattttgattgca
gagccctctagggaattcttagaatctttggtatggcaatcagagaagtatcgggataat
atgagctctcttttgcttgtcgagcatccagctgttaaccttgcacatcagcatcattca
ctgagagagctgaagaaaaaactgctgcttgaggttgaagcaccaatgcttggctcacta
gaggagggctggtggcttcatagagttttaaatccagcagctgtagaaattttggaacaa
ttcaatatggatggaagtaatgcaaacagtctacttccaacagaagtagaaacattcaca
caatttacaacatataaattagaaagatggcttgaggagaagaattgtgtgacaaaccaa
gagctgctttctgctgaaggacattcatcagagaaagtagttaatcctgacttgtcactg
cagattcaaaggcagaactttgctgtgagtgctctgtcacctgccaaaattcacagtaca
aatacatctgtagcagagcttactggaggaagcataagcaagattaagacagaagaggca
atttacttcttaaaccaagaaaagaaaacccccgaaccatttgaatcagacagctgtaaa
gatgtgtcttctaaactagacaaatcatcctgtagtggaaagcctgcatctcttgcactt
gcttctaaatgggccaacgatgattctgatctgaacaacttcattatgatgagatctaaa
tatacagtcacccaaagagaggacaaatattatgtagataggcctgaaaaaggggtacag
cctgaagatcagcatatcaatattctcaaagaggacaattctttttgtgagactgtaaaa
acggaggaaaacacccaagagaataaagacagtatcactatcaatattcagccatcagaa
agccaatgccaggcatactgcctcttggaagaagcagctattcctgtactaaaagatttg
acacacctgggtgtacttgcttctgttacttggagctttgacagtgttaaaattgatcat
acaaggtttttcttgaaacaacaagagaaagtgatatatgataattttaaacaaggtaaa
gtagacgagaaggagatcctgctgttcagacatgctgctctggtgcacgtgctggtgaca
gttcgagatctgctactaacatgtggctgggatacagctctaggttatttgtccaaggca
aaggatatctacaaaaacattttagaatcctgtttgaataatatctggaggcagctgaag
attgtacagtacagtagccagaaaaagcatgaaactcatcccaaaataacagcacttcag
tgtgaaatgttaaattggatgaaaagttgtggagagaaacacagtgttaaggtactaatc
attacaaggatggactctgaaagagaaaaagatgccttcattcatccattatctaggata
gaaggtttgaaagctgtggatttgaattctgagaaaaaaggaagccctttaagttgtaaa
gagatcataagcaatcttagtagatattcctgcattattgtacataatcagcaaattcga
gctgacttcccttggacacacttctcactagtaatggagtatgattattctgaaaattct
ggctggaaaaatctgtgcaaaaatctgaatgttacttacatgacttttaaaacgaccttc
cctgaaacaagacaaatgaggaatcatggtggttcctttcttctggaagtacagattcca
tatgtatttctgacaactgaaggtcttcttaatatgccagatattcttcagctttttgaa
tccaagtacagcattacctttgttgaaagaagcagcagttactccttaaggctctttgga
agtgcagatcaatatgttgtgctgacagtagatgaatgcactgctatctttctgcagagt
gtcgaagaactaaattatgaggacttctgtgacactgtaatatcaaggctgatggcatta
tcactccaatatatgtgctgttggattattttctattccaaagaaagactgagtttagag
tacagtctcaagggaaatactctgcttaatcttgtcttaatttatgccactgtaattgaa
cttacacagaagtcagaagactttgaagtgaaggtagttcttacgccagggattgaagag
acagcactggtaattcgtcagattgctgacaacgttttgatagcatctaatatcagccct
catgagtggctggacaaatcctggctttctatcttaccatctgagccagagaaatgcctg
cttacttttccatgtattaatcctttggttgcccagtttatgttaaagaagggattatca
ctgaacagattatttcttgcaagctttgatcaactccaggaactactgccacaggctcca
aaaaaagttttaaagcatttcagtgacatgatatcttcatacagcctaaatgctgctgct
ctagaaaaaacagtgaaaggtgcatcacacccagaaaaccagaataaagtcaacacattg
tatcttgataataaacaaaattgtcagattttagagctgcttgataaggcacaaaacagc
acaggaccatctcgtatgaatgctgaagccctaaatcctccactgaattatcataagggt
tttttaaagtctgatcttccaagttgtatgcaaaagaaagcgtgctcgtcagatgtaatt
acaaggagaaagctgaatttctttgctgtatcaaaggacaatgaagattttgctcatcca
gaagttaaaaattctctccatgttcaaagacagcctttcagaatgcataatagctctgat
cattcttccaaagactctgaaaaacaggatttctttgcagctttcagtgactgtgcacct
caggagagctcgaagagttttctagatgaatttagagacacaacatttaaaagcccagaa
attcagatcgaccagtccctgtggaatgattcttcatccacaggcccacataattcattt
gctcacgatggttttctatctgatttctttgatgatacgaatgagcttcaaaatctgaat
tttagtcaaataggtgaaacacctaaaggaaagaggaaaaaaaggcctccattcttatgg
acaaaggaaaaaattaaaacagattcaggatttccagaactgcaggagttcaaaaaaagg
aaattgacatatgaaagagtccctggaagaagagatggacaaacacgtcttaaattcttt
tcagcaaaatga
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