Zonotrichia albicollis (white-throated sparrow): 102062648
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Entry
102062648 CDS
T07911
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zab03036
]
102062648 (SMARCAL1)
Chromosome and associated proteins [BR:
zab03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102062648 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DUF7480
OmpA
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
102062648
NCBI-ProteinID:
XP_005485249
Ensembl:
ENSZALG00000014384
UniProt:
A0A8D2QHT6
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MSSGLTEEQKRRIEENRRLALARRAERLAAQGAGHGGIAAAPHTGHRLGKPGSSKEENNH
VGFTSQPPHNPNTPVEQRNCLQKGYNHYTAKQQMAGSHREQQKSCSEDSEQASGLKQFPA
MIPNSLSYSHKHFLDAGSQEDGQRTSVNHGTFQQPKCSPAFKNPTGPPHPRFTDNGHPED
SKDLQTQDKSAIKYVSPPVRVLVSDSEMLESMNTVTERTGGGFVPQARGGVQKLTTSAGV
GSASEAASHKKANNITKGKCVKYGEDRFQVEIGYNAELIAVFKKVPSKAYDPAMKKWNFS
MEDYSSVLEAANQLSSVILAPLEGESVVGLASGSHFVGSRVDVKSLLKMCKSWKKPSALV
KGKCVLISRLRFEVDVGYSAEVIAVFKKMDSRNYDMNTRKWNFLLEDYPKLMQELLSLVS
VEVEPLPEAVIKTFAAQLQRSPSLTDIPDADLSGVDSKIVTSLMPFQREGVNFAISRKGR
LLLADDMGLGKTIQAICIAAYYQQEWPLLVITPSSVRFTWAEAFHRWLPSLSPGSTNVVV
SGKDSLTGSLINIISFDLLSRMDKQLKSTFQVVIVDESHFLKNTKTARCQAAMPLLKAAR
RVILLSGTPAMSRPAELYTQIAAVQPGFFPLFHSFGLRYCDARKMPWGWDYSGSSNLIEL
KILLEESIMIRRLKSDVLSQLPAKQRKMVVVAPEGISAKTKAALAAEAKKMAKGYESKQQ
EKEALLVYFSRTAEAKIRSVVEYILELLESGKNKFLVFAHHKIMLDAVAAELKKKHVEHI
RIDGSTSSAERQTLCQKFQLSEKQAVAVLSLTAANMGLTLSAADLVVFAELFWNPGILIQ
AEDRAHRIGQTSSVNVHYLVAKGTADDYLWPMIQEKIKVLGEAGLSETNFSETAESTNYC
PKTDPKQTTIFDLFQKTFSESRDDADDVLFLEAADAGCEFDSGSALQDREAEAHSVSPKK
KRRIEEV
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaggccttacagaggagcagaagaggaggatagaggagaaccggcggctggct
ttggccaggagggcagagaggctggcagcccagggcgctgggcatgggggcatcgctgca
gctccgcacaccgggcacaggctgggcaagccgggcagctccaaggaggaaaacaatcat
gttgggttcaccagccagcccccacacaatccaaacacgcctgtggagcagaggaactgt
ctccagaaaggctataaccattacacagccaagcaacagatggctggctcacacagagag
cagcagaagagttgttcagaggactcggagcaagcaagtggcctaaagcagttccctgcg
atgatcccgaattctctgagttattcccataaacatttcttggatgctggtagtcaggaa
gatggacagcgcacttcagttaatcatggaacattccagcagcccaaatgcagcccagcg
ttcaaaaaccccacaggaccacctcatccaagattcactgataatgggcaccctgaggat
agtaaagatttacaaactcaggacaaatctgccattaaatatgtttcaccaccagtccgt
gtcctcgtgagcgattcagaaatgctggaaagcatgaacacagtgacagaaagaacagga
ggaggttttgtccctcaggccaggggtggggtgcagaagctgaccacctctgctggtgtg
ggctctgcctctgaagctgcctctcacaagaaagcaaataacattacaaaaggaaaatgt
gtgaaatatggggaagaccgattccaggttgaaatagggtacaatgctgaacttattgct
gtgtttaagaaggttccaagcaaagcctatgatcctgctatgaaaaaatggaatttcagc
atggaagattacagcagtgtcttggaagcagccaatcaactttcatcagtaattctggca
ccactggaaggagaaagtgtggttggcttggcatcaggctctcattttgttggcagcagg
gttgatgtgaaatccctcttgaagatgtgtaagagctggaagaagccctcagccctggtc
aaagggaagtgtgtgctcatctcccgcctgcgatttgaggtcgatgttgggtattctgca
gaagtgattgcagtgttcaaaaagatggattccagaaattatgatatgaataccagaaag
tggaatttcctgctggaggattaccccaaactaatgcaagagttactgagcctcgtgtcc
gtagaagtggagccactgcctgaagcagtaattaagacctttgctgctcagctccagaga
tctccatcactgacagacattcctgatgctgacctttcaggagtggactccaaaattgtg
acgagcctcatgccctttcagcgggaaggtgtgaattttgccatttccagaaagggacgt
ttgctgctggcggatgacatgggcctgggcaagaccatccaggccatctgcattgctgcc
tattaccagcaggagtggcccttgctggtgatcactccttcttctgtgaggtttacatgg
gcagaggcattccacagatggcttccatccttgagtccaggaagcaccaatgtcgtagtg
agtgggaaagacagcctaacaggaagcttgatcaacatcatcagttttgatctcctcagc
aggatggacaagcaacttaagagcacattccaagtagttattgttgatgaatctcatttc
ctgaagaacacaaaaactgcacgctgccaagctgccatgcctctactcaaggctgccagg
agggtgatcctgctctcaggaacgccggccatgtcgcggcccgcggagctgtacacgcag
atcgccgccgtgcagcccggcttcttcccgctcttccactccttcggcctgcgctactgc
gacgccaggaagatgccatggggttgggactactctggatcatccaacttaattgaattg
aaaattttgctggaagagtccatcatgatccgacgtctgaagtcagatgtgctttcccag
cttccagcaaagcagcgcaaaatggtcgtggtggctcctgaaggcattagtgcaaagacc
aaagctgccttggcagctgaagcaaagaagatggccaaaggatatgaaagtaaacaacag
gagaaggaagctcttcttgtctacttcagcagaacagcagaagccaaaatccgctcagtc
gtagagtacatcctggagttactggaaagtgggaagaataaattcctggtgtttgcccat
cacaagataatgctggatgcagtagctgcagagctgaagaagaaacacgtcgagcacatt
cgcatcgacggctccacatcctcagctgagcggcagactctgtgccagaagttccagctc
tcagagaagcaggctgtggctgtcctgtccctcactgctgcaaacatgggcctgacattg
tctgctgcagatctggtggtgtttgcagagctcttctggaacccagggattttgatccaa
gcagaagatcgggcacaccgaattggacagaccagctctgttaatgttcactacctggtg
gctaaaggcacagcagatgactacttatggccaatgattcaggagaagatcaaagtgctg
ggtgaagctggtctttcagaaaccaatttctctgaaacagctgagtcaactaattactgt
cctaagacagatccaaagcagacgacaatctttgaccttttccagaagaccttctctgag
agcagagatgatgctgatgatgttttgtttttggaggcagctgatgctggctgtgagttt
gactctggcagtgccctgcaagacagagaagcagaggcacattcagtgagtcccaaaaaa
aagcggcgtattgaggaagtgtaa
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integrated database retrieval system
