Zonotrichia albicollis (white-throated sparrow): 102062858
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Entry
102062858 CDS
T07911
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03030
DNA replication
zab03420
Nucleotide excision repair
zab03430
Mismatch repair
zab03440
Homologous recombination
zab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102062858 (RPA1)
03420 Nucleotide excision repair
102062858 (RPA1)
03430 Mismatch repair
102062858 (RPA1)
03440 Homologous recombination
102062858 (RPA1)
03460 Fanconi anemia pathway
102062858 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zab03000
]
102062858 (RPA1)
03032 DNA replication proteins [BR:
zab03032
]
102062858 (RPA1)
03400 DNA repair and recombination proteins [BR:
zab03400
]
102062858 (RPA1)
Transcription factors [BR:
zab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102062858 (RPA1)
DNA replication proteins [BR:
zab03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
102062858 (RPA1)
DNA repair and recombination proteins [BR:
zab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
102062858 (RPA1)
MMR (mismatch excision repair)
102062858 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
102062858 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
DUF4939
Motif
Other DBs
NCBI-GeneID:
102062858
NCBI-ProteinID:
XP_005493708
Ensembl:
ENSZALG00000015765
UniProt:
A0A8D2NA80
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MSVRLSEGAIAAIMQGEEVSKPVLQVINTRAIATGTGPPRYRVLMSDGVNTLSSFMLATQ
LNSLVEEERLSARCVCQVNRFIVNSLKDGRRVVILMDVNVLQTADQVGGPIGNPQPYSEA
QGQRSAAPAGNSAASKPQQQNGNLSGAGPAAPKYHAPSHQFGKASAPSALKTPGGSQIKV
VPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADK
FFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFVS
ISDLENTPKDSIVDVIGICKSYEDVTKITVKANNREVSKRNVHLMDTSGKLVTATLWGNE
AEQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLEC
TSISDVRGGPAAGANTNWKTLFEAKSENLGQGDKADYFSCVGTIVHLRKENCMYQACPSQ
DCNKKVIDQQNGLYRCEKCDREFPNFKYRLMLLVTIADCLEYQWVTCFQDTAEFILGQNA
AFLGELKEKNEQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATALDVKPVNYREYSK
RLIANIRRNAQLG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcggctgagtgaaggggccatcgcggccataatgcaaggggaggaggtctcc
aagcccgtgctgcaagtcatcaacacacgggctattgccacaggaactgggcccccacgg
taccgagtgctgatgagtgatggggtgaacaccctctcctcattcatgttggcaacacag
ctgaactccctggtggaagaggaacgcttgtcagcccgatgtgtttgccaggttaacaga
ttcattgtcaacagcctcaaagatggaaggagagtggtgatcctgatggatgtgaatgtc
ctgcaaactgctgatcaggttggtgggcccataggcaatccccagccatacagtgaggca
caagggcaacgttctgcagctccagcaggaaactcagcagccagcaaaccacagcagcaa
aatggcaatttgtctggagcaggtcctgctgctcccaagtaccacgctccctcgcaccag
tttggaaaagcgagtgctcccagtgccctgaagacacctggggggtctcagatcaaagtg
gtgcccattgccagcttgaatccataccagtccaagtggaccatttgtgctcgtgttacc
caaaaaggtcagatccgcacgtggagcaactctcgtggggaaggaaagctcttttccata
gagctggttgatgaaagtggtgagattagagctactgcattcaacgatcaagcagacaag
ttctttccactcattgaattgaacaaggtatattattttaccaaaggcaatttgaagact
gctaacaagcaatatacagctgttaagaatgactacgagattacattcactaatgagact
tcagttgtgccctgtgatgatgcccagcatcttccatctgttcagtttgattttgtatcc
atctctgacttggagaacacgcccaaagactcgattgttgatgtaattggaatttgcaag
agctacgaagatgtcactaaaattacagtgaaagctaacaatagggaggtttcaaagagg
aacgtgcatctgatggatacatcagggaaactggtgacagctacactgtggggaaatgag
gctgaacagtttgatggctccagacaacctgtgattgccatcaaaggagcccgtgtctct
gactttggtggcagaagcctgtctgtcctgtcctccagcacagttgtcatcaaccctgat
agcccagaggctttcaagctccgaggatggtttgactctgaggggcagcttctggaatgt
acctccatctctgatgtgaggggtgggccagcagctggagcaaataccaactggaaaact
ttgtttgaagccaaatctgagaacttgggacaaggagataaggcagattattttagctgt
gtgggcaccattgtacatctgcgcaaggagaactgcatgtaccaggcgtgtccctcgcag
gattgcaacaagaaggtgatagaccagcagaacggactttaccgctgcgagaagtgcgac
cgcgagttccccaacttcaagtaccgcctgatgctcctggtgaccattgcagactgcctg
gaatatcagtgggtgacttgttttcaagacacagcagaattcattcttggccaaaatgct
gcttttctgggagaactgaaggaaaagaacgagcaggcttttgaagaagtgttccaaaat
gcaaacttcaacacctacgagttcaggatccgggtgaagctggagacttacaacgacgag
tctcgtattaaggccacagcactggacgtcaaacccgtgaactacagagaatacagcaag
aggttgattgccaacatcaggaggaatgctcagctgggatga
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integrated database retrieval system
