Zonotrichia albicollis (white-throated sparrow): 102062961
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Entry
102062961 CDS
T07911
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1
KO
K12385
Niemann-Pick C1 protein
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
zab04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
102062961 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
102062961 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zab02000
]
102062961 (NPC1)
Transporters [BR:
zab02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
102062961 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
102062961
NCBI-ProteinID:
XP_005490764
Ensembl:
ENSZALG00000007727
UniProt:
A0A8D2MMP5
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MGTPQGSPGRSGLGFLVLLLLLSPVRVLPQMCVWYGECGVASGDKRYNCAYDGPPIALPE
DGYDLMQELCPGLFFGNVSTCCDVHQLQTLKNNLQLPLQFLSRCPSCFYNLINLFCELTC
SPNQSDFLNVTSTIPYYDPVSKENKSSITELQYFIGDRFANAMYNACKDVEAPSSNVKAL
GLLCGKDAKDCNATNWIEYMFSKDNGQTPFSIIPIFSDVPVHGMNPMNNATKGCNESVDD
STGPCSCQDCSIVCGPKPQPPPLPPPWLLFGLDAVYVIMWISYMGFLLIFFALVFGVWCY
RRRHFVSEYTPIDSNVAFSANSHRDNGSITCGERLGERFENGLRMTFTSWGAFCVRNPRP
VILFSVVFIAMCCSGFVYIKATTNPVDLWSAPSSQARKEKEYFDTHFGPFFRTEQIIIQA
PKSHPDTYSPYPSGEDVPFGPPLTKDILHQVLDLQDAIVNITASYDNETVMLKDICLAPL
APYNNNCTILSVLNYFQNSHSVLDHTVGDEFFVYADYHTHFLYCVRAPASLNDTSLLHDP
CLGTFGGPVFPWLVLGGYDDDNYNNATALVITFPVNNYYNDSKNLMKALAWEKEFINFLK
NYNNSNLTISFSAERSIEDEINRESNSDVSVVLISYLVMFLYISIALGHIQSCRRLLVDS
KISLGIAGILIVLSSVACSIGIFSYFGIPLTLIVIEVIPFLVLAIGVDNIFIMVQTLQRD
ERLQGETLDKQIGRVLGDVAPSMFLSSFSETVAFFLGTLSTMPAVRTFSLFAGMAVLIDF
LLQVTCFVSLLGLDIKRQESNRLDILCCIKSSEEMSGVQRSESMLFLFFKNLFSPYLLKD
WMRPIVIAVFVGILSFSAAVMHNVEIGLDQSLSMPDDSYVIDYFSHISKYLHAGPPVYFV
LEEGHNYTTLEGQNMVCGGTGCNNDSLVQQVFNAAEIGSYTKIGYAPSSWIDDYFDWVKP
QSSCCRVYNTTGQFCNASVSDPSCTRCRPLTQEGKQRPQGEDFMTFLPMFLSDNPNPKCG
KGGHAAYNSAVNFINNKTEVGATYFMTYHTVLKTSSDYIDAMRKARIIADNITETMGIKE
KNYRVFPYSVFYVFYEQYLTIVHDAIFNLCISLGSIFLVTTVLLGFEVWAAVVVSITIAM
IIVNMFGVMWLWGISLNAVSLVNLVMSCGIAVEFCSHVTRAFTISTKGSRVERAEEALSH
MGSSVFSGITLTKFGGIVVLAFSKSQIFKIFYFRMYLAMVVLGATHGLIFLPVLLSYIGP
SVNKAKTRAAQERTRGTERERLLYF
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggggacccctcaaggcagccccgggcgaagcggcctcggattcctcgtcctcctcctg
cttctgtcgcccgtgcgggtacttccacaaatgtgtgtctggtatggagaatgtggagtt
gcttcgggagacaagaggtacaactgtgcttatgatgggccaccaatagcgctaccagaa
gatggctatgacttaatgcaggaactctgtccgggtttattctttggcaatgttagtact
tgctgcgatgttcatcagcttcagactttgaaaaataacttgcagctgcctttgcagttt
ctctccagatgtccatcgtgtttttacaacttgataaacctcttctgtgaactgacttgt
agtcccaatcagtctgactttttgaatgttacaagcaccataccttactatgatcccgtt
tcaaaagagaacaaaagtagcattacagagctgcagtacttcatcggagatcgatttgca
aatgcaatgtataatgcctgcaaagatgtggaggctccatcaagcaatgttaaagcactg
gggttgctgtgtgggaaggatgctaaagactgcaatgcaaccaactggattgagtacatg
tttagtaaagacaatggacaaactcctttcagcataattccaattttttcagatgttcct
gtccatggaatgaaccccatgaataatgctaccaaaggctgtaatgagtccgtggatgat
tcaacaggaccatgcagctgtcaggactgttcaattgtctgtggtccaaaacctcagccc
cctccattgcctcccccttggctactgtttggtttggatgctgtctatgtcatcatgtgg
atctcatacatgggctttctactcatattttttgcactagtttttggagtctggtgttac
aggaggcggcactttgtctcagagtacaccccaattgacagcaatgtagccttttctgcg
aattcccaccgtgacaatggaagtattacctgtggtgaaaggcttggtgaaaggtttgag
aatggcctgaggatgacatttacatcatggggggctttctgtgtcagaaatccacgtcct
gttatcctcttctctgtggtcttcattgcaatgtgctgctcaggctttgtatatattaaa
gcaactacaaatcctgtagatctttggtcagccccaagcagccaagcccgcaaggagaag
gaatactttgacacacactttggacctttcttccgtactgaacaaattattattcaagca
ccaaagagccacccagacacctactcaccttacccatcaggagaagatgtgccttttggc
cctccccttaccaaagatattctccatcaggtactggatttgcaggatgctattgtcaac
atcactgcttcttatgacaatgagactgtaatgctgaaggacatttgcctggctcctctt
gctccctacaacaacaactgcactatcctgagcgtactcaactactttcagaacagccat
tctgttctggatcacactgttggggatgagttctttgtctatgctgattaccacactcac
ttcttatactgtgttcgggctccagcatcactgaatgacacaagcttgcttcacgatccc
tgcttaggaacatttggtggacctgtatttccgtggctggtgttgggaggatatgatgat
gataactataataatgctacagctcttgttattacttttcctgtcaacaactactacaat
gactcaaaaaatctgatgaaagccttggcatgggaaaaagagtttattaactttctgaag
aactacaataactcaaacttaacgatatcattttctgctgaacggagtattgaagatgag
atcaaccgcgagagcaacagtgatgttagcgttgtgttgataagctatcttgtgatgttc
ctctacatctctatagctttgggacacatccagagctgtagaagactgctggtggattcg
aagatctctctgggcattgcaggcatcctgattgtactgagctcagtagcatgttctata
ggcattttcagctactttggaatcccactgacactgattgtgatagaagtaattcctttc
ttggtgctggctattggagtggacaacattttcattatggttcagacacttcagagagat
gaacgccttcagggtgaaactctggataaacagattggcagagtcttgggagatgtggca
cccagtatgtttctctcatccttttcagagactgtggcattctttcttgggacactgtct
acgatgccagcggttcgcacgttctccctgtttgctggaatggctgtgctcatagacttc
ctccttcaagtcacttgcttcgtcagtctcctgggcttggatattaagcgtcaagagagt
aacagactggatattctgtgttgcatcaaaagcagtgaagaaatgagtggagtccagcgt
tctgagagcatgttatttctgttcttcaaaaatctgttttctccatatctgcttaaggat
tggatgagaccaatagtaatagcagtgtttgtgggtatcctgtcattcagtgcagcagtt
atgcacaatgtagagattgggctggatcagtctctctcaatgccagatgactcctatgta
atagattacttcagccacatcagcaagtacctgcatgcgggtccccctgtctactttgtc
ctagaagaaggacacaactacaccactttggaagggcagaacatggtgtgtggtggaacg
ggatgtaataacgattcacttgtccagcaagtcttcaatgctgcggaaattggtagctac
acaaagataggctatgccccatcatcctggattgatgactactttgactgggtgaagcca
cagtcgtcctgttgcagagtctacaataccactggacagttttgcaatgcttcagtcagc
gatccatcctgcactcgttgtcgaccactgactcaagaaggcaagcagagaccacagggt
gaagacttcatgacctttttgccaatgttcctatcagacaaccctaatcctaaatgtggc
aaaggaggacacgctgcatataactctgctgtcaacttcataaacaacaaaactgaggtg
ggagccacttattttatgacttaccatactgtactgaaaacatcatctgattatattgat
gccatgaggaaagctcggattatagcagacaatattactgaaaccatgggcatcaaagag
aagaactaccgcgtgtttccttacagtgtgttttatgtcttctatgaacaatacctgaca
attgtgcatgatgctatctttaacctctgcatctctttgggatcaatatttctggtgaca
actgtgcttcttggttttgaagtatgggctgctgttgtggtttcaataactattgctatg
ataattgtcaacatgtttggagtgatgtggctctggggaatcagcttgaatgcagtttca
ttagtaaatcttgtcatgagttgtggaattgctgtggaattctgcagtcatgtgacaaga
gcattcaccatcagtaccaagggcagtagagtggagcgtgcagaagaagctctgtctcac
atgggcagctcagtgttcagtggtatcacgctgaccaaatttggaggaattgtagtattg
gctttttccaaatctcaaatcttcaagatattctacttcaggatgtatctagctatggtt
gtgctgggagcaacacatgggctgatatttcttccagttctgcttagttacataggccca
tcagtcaataaagctaaaactcgtgctgcacaagagaggaccagaggtacagagcgggaa
agactcctctacttctag
DBGET
integrated database retrieval system
