Zonotrichia albicollis (white-throated sparrow): 102063018
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Entry
102063018 CDS
T07911
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102063018 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zab03021
]
102063018 (CPSF3)
03019 Messenger RNA biogenesis [BR:
zab03019
]
102063018 (CPSF3)
Transcription machinery [BR:
zab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102063018 (CPSF3)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102063018 (CPSF3)
U7-dependent histone pre-mRNA processing factors
102063018 (CPSF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
102063018
NCBI-ProteinID:
XP_005487269
Ensembl:
ENSZALG00000016801
UniProt:
A0A8D2NEW9
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MAAKRKAEALIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KPEQGQRISGILVKRNFNYHILSPCDLSSYTDLAMSTVTQTQAIPYTGPFNLLSFQLQKL
TGDVEEIEIQQKPALKVFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKI
QKAAVNKISKKIDMDVYRKRMEIMLQDMFGEDCVSSKDESVLCITVDGKTANISLDTRTV
DCEPGSEDDESLREMVELAAQRLYDALSPVY
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaagcgcaaagccgaggcgctgatcccggccgaggagagcgaccagctgctc
atccggcccctaggtgctggccaagaagtaggaaggtcatgtatcattctggagtttaaa
ggaagaaaaataatgcttgattgtggaatccatcctgggctggaaggaatggatgctctt
ccttacattgatctgatagatccagctgagattgatctcctccttattagtcacttccat
ttagatcactgtggggctttgccatggtttttacagaaaacaagttttaagggaaggaca
tttatgactcatgccacaaaagctatttacagatggcttctttcagactatgttaaagtc
agtaacatctcagcagatgacatgctgtacacagaaacagacctggaagaaagcatggac
aagattgagaccatcaacttccatgaagtgaaagaggtggcaggaatcaaattctggtgc
taccatgcaggccacgttctgggagcagccatgtttatgattgaaatagctggtgtgaag
ctgttatatacaggtgatttctcaaggcaggaggacagacacctgatggcagctgagatt
cccaatattaaacccgacattcttataattgaatccacctatggcacgcacatccacgag
aagagggaggagcgggaggcgcggttctgcaacaccgtgcacgacatcgtcaacagaggg
ggccgaggcctcatccccgtgtttgccctgggccgagctcaggagctgctcctcatccta
gatgaatactggcagaatcatcctgaactgcatgatatccccatatactatgcctcctct
ttggccaagaaatgtatggcagtttatcagacctacgtcaatgccatgaatgacaaaatc
cgcaagcaaattaacatcaacaatccttttgttttcaagcacattagtaatctgaagagt
atggatcacttcgatgacattggccccagtgttgtgatggcttccccaggtatgatgcag
agtggattatccagggagttgtttgagagctggtgcacagataagagaaatggagtcatt
attgcagggtactgcgttgaaggaactcttgctaagcacatcatgtctgaacctgaagag
atcacaactatgtcagggcaaaaactcccactgaagatgtctgtggattacatttctttc
tctgctcacacagattatcaacaaaccagtgaatttatccgggccctgaaacctccacat
gtgattttagttcatggtgagcagaatgaaatggccagattgaaagcagcattgatacgg
gagtatgaggataatgatgaagttcatatagaagttcataatcctaggaatactgaagct
gtgacattaaacttcagaggagaaaaacttgccaaggtgatgggatctttagcagataag
aaaccagagcaaggacagagaatttctggaatccttgttaaaagaaattttaactatcac
atcctttctccatgtgacctctccagttacacggacttggccatgagcacggtgacccag
acccaggccatcccctacacgggccctttcaatctgctctcgttccagctgcagaaactc
accggtgatgtagaagaaatagaaatccagcaaaaaccagccctgaaggttttcaaaaat
attactgtgatccaggaaccaggcatggtagtccttgagtgggtggcaaatcctgctaat
gatatgtatgcagacactgtgacaacagtgatactggaagttcagtcaaaccccaaaata
cagaaagctgcagtaaataagatttccaaaaaaatagatatggatgtatataggaagaga
atggagatcatgcttcaggatatgtttggagaggactgtgtgagttccaaagatgagtct
gtgctgtgcatcacagtggatggaaagactgccaacatttccctggacactcggacagtt
gactgtgagccagggagtgaagatgacgaatcccttcgtgaaatggtggaactggcagca
cagaggctttatgatgccctcagccctgtatactga
DBGET
integrated database retrieval system
