Zonotrichia albicollis (white-throated sparrow): 102063049
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Entry
102063049 CDS
T07911
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102063049 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zab03019
]
102063049 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
zab03016
]
102063049 (ZCCHC7)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
102063049 (ZCCHC7)
Transfer RNA biogenesis [BR:
zab03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
102063049 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
Host_attach
zf-CCHC_3
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
102063049
NCBI-ProteinID:
XP_005496927
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MDQNLDSSLSRIFTGYDDPENSEVYEDELYLEESSSERSVDSEVEFHLYSQIHYSQDLGE
VRTLEMNEEADAGEVVGQSSGLAGKQDEDENLTELTDGGAQLSDEPEVIVLSDTPEEDSI
YKSKAKRSRCSSSAPGKAHACPVSSTPNHNKAAGCSARCHHEPGVGTPRKRSSPSGRPAP
VLPAGPEGPQDVLVIDNSSEEEEEEEESLISDGEDVESWMLLGAGADDTDGDIMLNLEGC
ATPARKGEIDVNWSISHKDLEAQISNYAGVRHSSMRYYRADKNVTCRNCHRPGHLSKNCP
TPKKVPPCCLCAGRDHLQHSCPARFCLNCCLPGHYFRECLERAYWNKHCNRCDMKGHYAD
ACPEIWRQYHLTTKPGPIQAAGSPSPSERAVSIYCYNCSRQGHLGYECSEKRMQGNMFPT
SPFVYYYDDECDIRRRANRLKRKVADLQEAGLLPEQPETPLQEEPLEVPSHKKKSKLWKE
QQGRPCRSSEQHKKMKVKRVKKAQEERQRRAAGIHGDPEDFPRGHKLQGCKGSRAHRRAL
PQAPPGCKALSMHQPPEGAKRKKKWKKQKIASPDSRDNLFLIKQRKKKSKQKSW
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaacttagactcttcactttccagaatatttactgggtatgatgatcctgag
aattctgaagtgtatgaagatgaactttatctcgaggagtcatccagtgagcggagtgtt
gacagtgaggtggagtttcatctctatagccagatccactattcccaggatctcggagaa
gtcagaacactggaaatgaatgaggaagctgatgctggagaagtcgtgggtcaaagttcc
gggctagctgggaaacaggacgaagatgagaatctcactgagctcactgatggtggcgct
cagctttcagatgagcccgaggtcattgtcctgtctgacaccccagaggaagacagcatc
tacaaaagcaaggcaaagaggtcaaggtgctcctcttcagctccaggtaaagcacacgcg
tgcccggtatcctccacgccaaatcacaacaaagctgctggatgcagtgcccggtgccac
catgagcctggtgtgggcacgccaaggaagaggagcagccctagtgggaggcctgcccca
gtccttcctgccggacctgagggcccccaggacgtgctggtgatagacaacagctcagag
gaggaggaggaggaggaggagagcctcatctctgacggcgaggacgtcgagagctggatg
ctgctgggagctggtgccgatgacacggatggggacatcatgctgaacctcgagggctgt
gccacgcctgccaggaaaggagaaattgatgtgaactggtctatctctcataaagactta
gaggcacagatctccaactacgcgggcgtgcggcacagcagcatgcgctactacagagcg
gacaaaaacgtcacctgtaggaactgccacagaccaggacatttgtccaagaactgtccc
actccaaagaaagttcccccgtgctgtctgtgtgcaggaagagaccatctgcagcacagc
tgcccagcacgtttctgcctcaactgctgcttgcccgggcactatttcagggaatgcctg
gagagagcctactggaacaagcactgcaaccgctgcgacatgaagggccactatgctgat
gcttgcccagaaatatggaggcagtatcacctaacaaccaagccaggacccatccaggca
gccggctcgccctcgccctcggagcgcgcggtctccatctactgctacaactgctcccgc
cagggacacctgggctacgagtgctcagagaagaggatgcaggggaacatgttccccact
tctcccttcgtctactactacgatgatgagtgcgacatcaggaggagagccaacaggttg
aaaagaaaggtggcagacctgcaggaagccggcctcctgcccgagcagcccgaaacaccc
ctgcaggaggagccgctcgaggtgcccagccacaagaaaaagagcaaactctggaaagag
cagcagggcaggccctgcaggagcagcgagcagcacaagaagatgaaggtgaagcgggtg
aagaaggcccaggaggagaggcagaggagggctgctgggatccacggggacccggaggat
ttccctcgggggcacaagctgcagggctgcaagggcagcagggcccaccgcagggccctg
ccccaggcacccccaggctgcaaggccctcagcatgcaccagcccccagaaggtgccaaa
aggaagaagaaatggaaaaagcagaaaattgccagtcctgacagcagggacaatctgttc
cttataaaacagaggaagaagaaatccaagcagaaatcctggtga
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