Zonotrichia albicollis (white-throated sparrow): 102063052
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Entry
102063052 CDS
T07911
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03013
Nucleocytoplasmic transport
zab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102063052 (CASC3)
03015 mRNA surveillance pathway
102063052 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zab03019
]
102063052 (CASC3)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102063052 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
102063052
NCBI-ProteinID:
XP_014130311
Ensembl:
ENSZALG00000000594
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
GAAGALGAGPRGRGAESASGAGGKSAAESECESEDGIEGDAVLSDYESAEDSEAEEEDYS
EEESSKVELKQDSNDSCESAARGEKGSEKVDAKGAVTGERQSGDGQESTEPVEKKVGKKV
PKHLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFRED
EQAPKTRQELIALYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPNWSNERPPKPPRHQG
AKSPSAPPRSYNSRSSGSAGRMPNARNYPRMGGYKDTRPGYRASEAPVLHRNGEQAKQEG
GYRGKHAEQSPSRDTSPELEVGHIHGSPGKEEGALENQATGADAVQPPPDRPVEKKSYSR
ARRTRVKAGEAGKLAEEVPASEGLAPVIPKATPAESSPTAAKSNWESPMESSVDGLEQEM
TQMNLTEQNWSPGQSQFIPPRELRGIPNHVHVGTGPAPQFNRMEEMAVPGGRVKRYSSQR
QRPPVPEPAPPMHISIVEGHYYDPLQFQGPIYAHGENPAPLPPQGMIVQPEMHLPHPGLH
PHQTPPAMANPGLYPPAVSMPPGQPPPQQLLTPTYFSAPGVMNFGNPGYPYPPGALPPPP
PPHLYSNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKER
SNT
NT seq
1993 nt
NT seq
+upstream
nt +downstream
nt
cggcgccgcgggggccctcggggctgggccgcggggtcgcggggctgagagcgccagtgg
ggccggggggaagagcgcggccgagtcggagtgtgaaagtgaggatggcattgaaggaga
tgccgtgctctctgactacgaaagcgccgaggactcggaggcagaggaagaggattacag
cgaggaagaaagctccaaggtggagctgaagcaggacagcaacgattcctgcgagtcagc
agccagaggagagaagggcagtgagaaggtggatgccaagggagcggtgacgggcgagcg
gcagagcggggacgggcaggagagcaccgagcctgtggagaagaaggttgggaagaaggt
tcccaagcacctggatgacgatgaggatcgcaagaacccggcgtacatcccgcgcaaggg
gctcttctttgagcacgacctccgagggcagacgcaggaggaggaggtcaggcccaaggg
tcgtcagcggaagctgtggaaggacgaggggcgctgggaacatgacaagttccgtgagga
tgagcaggcccccaagaccaggcaggagctgattgctctgtatgggtacgacatccgctc
agcccacaaccccgacgacatcaaaccccgcaggatgcgcaagccacgctttggcagtcc
ccctcagcgagaccccaactggtccaacgagaggccccccaagcccccgaggcaccaggg
tgccaagagcccctcagctcccccacgctcctacaacagccgcagctctggcagcgctgg
caggatgcccaatgccaggaactaccccaggatggggggctacaaggacacacgtccagg
ctaccgagcctcagaggcccctgtgctgcacaggaacggggaacaagccaagcaggaggg
tggctaccgtgggaagcacgcagagcagagcccatcgagggacacgtcccctgagctgga
ggtgggacacatccatggcagccctgggaaggaggagggagctctggaaaaccaagccac
gggtgctgatgctgtgcagccaccaccggacagaccagtggagaagaaatcttattcccg
ggcaagaaggaccagagtcaaggctggggaggcagggaagctggcagaggaggtgcctgc
ttctgaggggctggctcctgtgattccaaaagccacgccagctgagagctcccccacggc
agccaagagcaactgggagtcaccaatggaatccagcgtggatggacttgagcaggagat
gacccagatgaacctgacagagcagaactggagcccggggcagtcccagttcatccctcc
ccgggagctgaggggtattcccaaccatgtgcacgtgggaactgggccagcgccgcagtt
taaccggatggaggagatggcagtgccaggggggcgtgtgaagcgctactcatcgcagag
acagagaccccccgtgccggagcctgcgccccccatgcacatcagcattgtggaagggca
ctactatgacccactacaattccagggaccaatctacgcccacggtgagaacccagcccc
gctgccgccccaagggatgattgtgcagccggagatgcacctccctcatccaggtttaca
cccccaccagacgcccccagccatggcaaaccccggcctgtaccccccagcagtgtccat
gcccccggggcagcccccgccgcagcagctgctcactccgacttacttctctgcccctgg
agtgatgaatttcggcaatcctggctacccctacccccctggagctctgccccctccgcc
ccctcctcatctctattccaacactcaggcgcagtcccaggtctatgggggggtcaccta
ctacaacactgtccagcagcaggtgcagcccaagccctccccgccccgccggacgtccca
gcctgtgaccatcaagccaccccctccagaggacagcaaaggtgaaaaatcaaaggagag
gagcaacacgtag
DBGET
integrated database retrieval system
