Zonotrichia albicollis (white-throated sparrow): 102063209
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Entry
102063209 CDS
T07911
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X2
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zab03000
]
102063209 (SOX5)
Transcription factors [BR:
zab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102063209 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102063209
NCBI-ProteinID:
XP_005492932
Ensembl:
ENSZALG00000010429
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MSSKRPASPYGEADGEVAMVTSRQKVGEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLL
TQENCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPLKAEEGGRQGGESLSGAALGTPE
RRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPE
SLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQ
QLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDP
YPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKIPGIAQGSLGAAVSPTS
IHTDKSTTSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPALRINSGASSLKSSV
PATLASPSARANTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCR
TEKDKTTLETLTQQLAVKQSEDGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNE
PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLS
KQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQLPLATA
GVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGLPALPGAYGPKGDEPLVKEELQPDEANG
DVYDDYDEEEEDPDADYGSDSENHMAGQAN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcgaccagcctctccgtatggggaagcagatggagaggtagccatggtg
acaagcagacagaaagtgggagaagaggagagtgacgggctcccagcctttcaccttccc
ttgcatgtgagttttcccaacaagcctcactctgaggaatttcagccagtttctctgctg
acgcaggagaactgtggccataggactcccacttcccagcacaacacaatggaagttgat
ggcaataaagtgatgtcttcgtttgccccgcacaactcatctacctcaccgctgaaggca
gaagaaggcgggcgccagggcggggagtcgctgtccggcgcggcgctgggcacccccgag
cgccgcaagggcagcctggccgatgtcgtggacaccctcaagcagaggaaaatggaggag
ctcatcaaaaacgagccagaagaaactcccagtattgaaaagctactatcaaaggactgg
aaagacaagcttcttgccatgggatcagggaactttggagaaataaaagggactccagag
agcctggctgagaaggagaggcagctcatgggcatgatcaaccagctgaccagcctgagg
gagcagctgctggcagcccacgacgagcagaagaagctggcggcgtctcagattgagaag
cagcggcagcagatggagctggccaagcagcagcaggagcagattgcaagacagcagcag
cagcttctgcagcagcagcacaaaattaaccttcttcagcagcagatccaggtccagggt
cagctgcctccattgatgatccccgtgttccctccagaccagcgcaccctggcagcagct
gcccagcaaggattcctccttcctcctggcttcagctacaaggcgggatgcagtgacccc
taccccgttcagctgatcccaactaccatggcagctgctgccgcagcaacgccgggccta
ggccctctccaactgcagcagttgtatgctgcccagctcgctgccatgcaggtgtctcca
ggaggaaagatccctggcattgcccaggggagccttggtgctgccgtgtcccccaccagc
atccacacagacaagagcacaaccagccctcctcccaagagcaaggatgaagtggcccag
cctctgaacctctcagccaaacccaagacatctgatggcaaatctcccacgtcccccacc
tctcctcacatgccagctctgagaataaacagtggggccagctcactaaagtcctcggtg
ccagcaacactagccagtccttcggccagagccaacacaataggttatttaaatgaccac
gacgctgtcaccaaggccatccaggaggcgcggcagatgaaggagcagctacggagggag
cagcaggtgctggatgggaaggtggccgtggtcaacagcctgggtctcaataactgcagg
acagaaaaagacaaaacaacactggagaccctgacccagcagctggcagtaaagcagagt
gaagatgggaagttcagccacgcaatgatggatttcaacatgagtggagattctgatggg
agcgcgggggtgtcggagtcgcggatctaccgggagtcgcgcgggcgcggcagcaacgag
ccgcacatcaagcgccccatgaacgccttcatggtgtgggccaaggacgagcgcaggaag
atcctgcaggccttccccgacatgcacaactccaacatcagcaagatcctaggatctcgc
tggaaagctatgacaaacctagagaagcagccatactacgaggagcaggcccggctgagc
aagcagcacctggagaagtacccagactacaagtacaagccgcggcccaagcgcacgtgc
ctggtggacggcaagaagctgcgcatcggcgagtacaaggccatcatgcgcaaccggcgc
caggagatgaggcagtacttcaacgtcgggcaacaggcgcagctgccgctggccacggcg
ggcgtggtgtacccgggagccatcgccatggcgggcatgccctcgccgcacctgccctcg
gagcactcgagcgtgtccagcagccccgagcccggcctgcccgcgctgcccggcgcctac
gggcccaagggcgacgagccgctcgtcaaggaggagctgcagcccgacgaggccaacggc
gacgtctacgacgactacgacgaggaggaggaggaccctgatgcagactatggcagtgac
agtgaaaaccacatggcgggccaggccaactga
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integrated database retrieval system
