Zonotrichia albicollis (white-throated sparrow): 102063559
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Entry
102063559 CDS
T07911
Symbol
NUP54
Name
(RefSeq) nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102063559 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zab03019
]
102063559 (NUP54)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102063559 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
102063559
NCBI-ProteinID:
XP_005492245
Ensembl:
ENSZALG00000003293
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MAFNFSATAGAGAANPTGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVSTTSTP
AFNFGNSLASAGAFGGFGTTTTSAAPAFSFSAPTNTGTGGLFGGTQNKGFGFGTSFGTGT
GTGLGSGLGTGLGFGGFGTQQQQQQQQTTLGTGLFNQPAQTPAQSNQLINTASALSAPTL
LGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSLMPNNKDEDG
LVVLVFNRKEADIRSQQQQLVESLHKILGGNQTLTVNVEGVKTMPDDQTEVIIYIVERSP
NGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELSPAQVKQLLQNPPAGVDPIIW
EQAKVDNPDPEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQTTTM
AKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPTQFKG
RLNELMSQIRMQNHFGAVRAEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDLEDIK
LIEHGLNESIPIRGGVFS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcagcgccacggcgggagccggggccgccaacccgaccggatttggt
gggcttgaaactgcaaactccactgccagtgggtttaattttgggggtttcggattaact
gctaatcccgcggtgaattttaatattgggaatttcggtgtttccactacctcaactcca
gctttcaattttggtaacagtctggcaagtgcaggtgccttcggaggctttgggaccacc
accaccagcgcggcaccggcgttcagcttctctgctcccaccaacaccggcaccggcgga
ctctttggtggtacccagaacaaaggctttggatttggtaccagttttggcacaggaact
ggaactggcttgggcagtgggttgggaactgggctaggctttggaggctttggaacccag
cagcagcagcagcagcagcagaccacattaggcactgggttgttcaaccagcctgcccag
acccccgctcagtccaaccagctcatcaacacagccagcgccctctcggccccgacactg
ctgggagatgagagggatgccattctggccaaatggaaccagctccaggccttctggggc
acgggcaaagggtacttcaacaacaacatcgctccggtggagttcacgcaggaaaacccc
ttctgcaggtttaaggctgtgggttacagtttaatgcccaacaacaaagatgaagatggc
ctcgtggtcctggtgtttaacagaaaagaagcagatattcgaagccagcagcagcagctc
gtagaatcgctacacaaaattttgggaggaaaccagaccctcactgtcaatgtcgaaggt
gttaaaacaatgcctgatgaccagacagaagtgatcatttacattgtggagcgctccccc
aacggcacctccaggagagttcctgcaacgaccctctatgcccacttcgagcaagccaac
atcaaatcatccctgcagcagctgggggtcagcctgtccatggccaggacagagctgtcc
ccagcacaagtcaagcagctcctgcagaaccctcctgccggtgttgatcctattatatgg
gaacaagccaaagttgataatcctgatcctgaaaagcttattcctgtgccaatggtgggt
ttcaaggaactgctgagaagattgaaggtccaggatcagatgaccaaacagcatcaaact
cgattagatataatatcagaagatatcagtgagctgcagaaaaaccaaacgacgactatg
gcaaaaattgcacaatacaaaaggaaactgatggcactttcgcacagaaccttgcaggtg
ctaataaagcaggagatccaaaggaaaagtggttatgccattcaggcagatgaggagcag
cttcgtgtacagttggatacaattcagtgtgaacttaacgcacccacgcagttcaagggc
agactgaatgagctcatgtcccagatcaggatgcaaaaccactttggagcagtgcgggct
gaagagcgctattacatagatgcagacctcttaagggaaatcaagcaacacctgaagcag
cagcaagaagggctgagtcacctaatcagcatcatcaaagatgatttggaggacatcaag
ctaatagaacacgggttaaacgagagcattcccatccgagggggagtcttcagttga
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