KEGG   Zonotrichia albicollis (white-throated sparrow): 102063642
Entry
102063642         CDS       T07911                                 
Symbol
PTCH2
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 2
  KO
K11101  patched 2
Organism
zab  Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:zab00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    102063642 (PTCH2)
SSDB
Motif
Pfam: Sterol-sensing TRA2_N Patched MMPL
Other DBs
NCBI-GeneID: 102063642
NCBI-ProteinID: XP_005482255
Ensembl: ENSZALG00000007718
LinkDB
Position
Unknown
AA seq 1429 aa
MGAAAAAAANGSGGGGAAPAPPAPXLPFRGAAGGRRRTHSPPSAPAPARPRRAHGGRRRA
RPHITGVPSPASRPAMPAEPPRAAPPLRAARRKPLPEGRAVGQRTPLWLRARFQALLFAL
GCRIQRHCGKVLFVGLLVFGALAVGLRVASIETDIEHLWVEAGSRVSQELRYTKEKLGEE
SVYTSQMLIQTPKKEGDNILTQEALQLHLEAALAASKVQVSLYGKSWDLNKICYKSGVPI
IENGMIERMIEKLFPCVILTPLDCFWEGSKLQGGSAYLPGRPDIQWSNLDPLQLMEELGQ
FTSLEGFKELLDKAEVGQAYMERPCLDPRDPQCPSSAPNKQSQQSPDIPAELSGGCHGFS
RKFMRWQQELILGGTTKDSQGKLLRAEALQTMFLLMSPRQLYEHFKDDYEIHDISWSEEK
AGAILEAWQRKFVELTQDSIPPNATQSVHAFSTTTLNDIMKSFSDVSVIRVAGGYLLMLA
YACVTMLRWDCSKSQGAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLALGIG
VDDMFLLAHAFTETSQHIPFKERTGECLKRTGTSVALTSVSNMIAFFMAALVPIPALRAF
SLQAAVVVVFNFAMVLFVFPAILSLDLHRREKRRLDILCCFYSPCSSRVIQIQPQELADA
NDNHACHPSPYGHPGMATSTQITTTVQAFTRCDPSGHHIVTVLPPTSQVCTSPAILLPHS
DPLGSQVFAPSSSTRDLLSQLDEAKGGRECVPLPFCRWSLADFAREKYAPLLLRTRTKAV
VVVLFLALLGLSLYGTTMVHDGLYLTDIVPRDTKAHAFISAQFKYFSFYNMFIVTKGGFH
YPGAQAALLSLHQAFSTVKYVVREGNQDLPKMWLHYFQDWLRGLQATFDRDWQAGRITHD
SYRNGSEDGALAYKLLIQTGNKKEPFNFNQLTTRRLVDENGIIPPDTFYICLTVWASNDP
LGFAASQANFYPPPPEWIHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRRTSDFVEAIE
SVRAICQEAAQRHGVLSYPSGYPFLFWEQYIGLRHWFLLAISILLACTFLVCALLLLNPW
TAGIIVSILAMIAVELFGIMGLMGIKLSAIPVVILIASVGIGVEFTVHVALGFLTAAGSR
NVRSAAALEHTFAPVMDGAVSTLLGVLMLAGSEFDFIMRYFFAVLTILTLLGLLNGLVLL
PVLLSVIGPPPEASLVDNGPCLPPPESIPPCLGPGGLYVRRAPAWPATFPEPSDTEQYTE
SVGPGSPRGPFVVPPAPAHILLEAGKDPSFPRITVLKPYKDSLEAQGKKEASGPQPAAPL
PFGEPCTTLPRDPPQPCPAGTRPAPSAALPTYSTHLQGPAGSYTTVTATASVTVALHPSL
PGSYPAFSPEGFTSGERDCLDEPSTSGAAVPDTFEMQNMGHHHGAGAWR
NT seq 4290 nt   +upstreamnt  +downstreamnt
atgggcgctgccgcggcggcggcggccaatgggagcggcggcggcggcgcggccccggcg
ccccccgcccccngcctcccctttagaggcgcggcgggcggccggcggcgcacacacagc
cctccatccgcaccggcaccggcacggccccgccgcgcgcatgggggccgccgccgcgct
cggccccacataacgggggtgcccagccccgccagccgccccgccatgccggccgagccc
ccccgcgccgcgccgccgctccgcgccgcccgccgcaagccgctgcccgagggcagggcc
gtgggccagaggaccccgctgtggctgcgggcccgctttcaggcgctgctcttcgccctg
ggctgccggatccagcggcactgcgggaaggtgctcttcgtggggctgctggtgttcggg
gcgctggccgtgggactacgggtggcctccatcgagaccgacatcgagcacctctgggtg
gaagcgggcagccgggtgagccaggagctgcgctacaccaaggagaagctgggcgaggag
tccgtctacacgtcccagatgttgatccagaccccgaagaaggagggtgataacattctg
acacaggaggccctgcagctccacctcgaggcggccttggccgccagcaaggttcaagtc
tccctgtacggaaaatcgtgggatttgaacaagatctgctacaagtcaggtgtccccatc
attgagaatggcatgatcgagaggatgatagagaagctgttcccctgtgtgatcctgaca
ccgctggactgcttctgggaaggctccaagctgcagggaggctcagcctatctcccgggc
cgcccggacatccagtggagcaacctggaccctctgcagctgatggaggagctggggcag
ttcacatccctggaaggcttcaaagagctgctagacaaggcagaggtgggacaggcttac
atggagcggccctgcctggacccccgggacccccagtgtccctccagtgcccccaacaag
cagagccagcagagccccgacatcccggccgagctctcagggggctgccacggcttctcc
aggaagttcatgcgctggcagcaggagctgattttaggtggcacgaccaaagactcccag
ggcaagctgctacgcgccgaggccctgcagaccatgttcctcctcatgagcccccggcag
ctctatgagcacttcaaggatgactacgagatccacgatatcagctggagcgaggagaag
gcaggagccatcctggaggcctggcagaggaaattcgtggagctgacacaggactccatc
cctcccaacgccacacagagtgtccatgctttctccaccaccacactcaacgacatcatg
aagtccttctctgacgtcagcgtcatccgggtggctgggggctacctcctcatgctggcc
tacgcctgtgtcaccatgctgcggtgggactgctccaagtcccaaggggctgtgggcctg
gctggggtcctgcttgtggctctctccgtcgcctctggcctggggctttgctcactgctg
ggcatctccttcaatgcagccaccacccaggtcctgcccttcctggccctcggcattggg
gtggatgacatgttcctcttggctcacgccttcaccgagacgagccagcacatccccttc
aaggagcggacgggtgagtgtctgaagcgcacggggaccagcgtggctctcacctctgtc
agcaacatgattgccttcttcatggcagccctggtgcccatccctgccctgcgtgccttc
tccctccaggctgcagtggttgttgtgttcaacttcgccatggtgctctttgttttccct
gccatcctgagcctggacctgcaccgccgggagaaacgccggctcgacatcctctgctgc
ttctacagcccttgctcctcaagggtcatccagatccagcctcaagagcttgctgatgcc
aatgacaaccatgcctgccacccatctccttatgggcaccccggcatggccaccagcacc
cagatcaccaccaccgtgcaagccttcacccggtgtgacccctcaggccaccacattgtc
actgtcctgccacccacctcccaggtgtgcacctcacctgccatcctgctgccccacagt
gatcccttgggctcgcaggtcttcgccccatccagctccacccgggatctgttgtcgcag
ctggatgaggccaagggtggccgggagtgtgtccccctgcccttctgccgctggagcctc
gctgatttcgcccgggagaagtacgccccactccttctgcgcacccggaccaaggcggtg
gtggtggtgctgttcctggcactgctagggctgagcctctatggcaccaccatggtacat
gatggcctctacctgacggacatcgtgccacgggacaccaaggcacacgccttcatctcg
gcccagttcaagtacttctccttctacaacatgttcattgtcactaagggtggattccac
tacccgggagcccaggctgccctgctgagcctgcaccaggccttcagcaccgtcaagtac
gtggtgcgggagggcaaccaagacctgcctaaaatgtggctccattacttccaggactgg
ctgagagggcttcaggccacctttgacagggactggcaggctgggcgcatcactcatgac
agctaccgcaatggctccgaggatggggcactggcatacaagctcctcatccagaccggc
aacaagaaggagcccttcaacttcaaccagctgaccacgcggcgactggtggatgagaat
ggcatcatcccccctgacaccttctacatctgcctgacagtgtgggccagcaacgacccc
ctgggctttgctgcctcccaggccaacttctaccccccaccccccgagtggattcatgac
aagtacgacaccacaggcgagaacctgcgaatcccagcagcccagccgctggagtttgcc
cagttccccttctacctgagcgggctgcgtcgcacgtccgactttgtggaggcgattgag
agcgttcgggccatctgccaggaggctgcgcagcgccacggcgtgctgagctaccccagt
ggctaccccttcctcttctgggagcagtacatcggcctgcggcactggttcctgctggcc
atcagcatcctgctggcctgcaccttcctcgtgtgcgccttgcttctgctcaacccctgg
accgctggcatcatcgtctccatcctggccatgattgctgtggaattgtttggcatcatg
gggctgatgggcatcaagctgagcgccatccctgtggtcatcctcattgcctcggtgggc
atcggtgtggagtttactgtccatgtggccctgggcttcctgacagctgcagggagcagg
aatgtgcgctcagctgcagcactggagcacacttttgcacctgtgatggatggtgctgtt
tccaccctcctgggtgtcctcatgctggctggctctgagtttgatttcatcatgaggtat
ttctttgcggtgctgaccatcctgacgctgctggggctgctcaatgggctggtgctgctg
cccgtgctgctctctgtcatcgggccaccccctgaggcatccctggtggataatggccct
tgcctacccccaccagagtcaatacccccatgtctgggccctgggggactttacgtccgg
cgtgctccagcctggcccgctaccttccctgagccctctgacacagagcagtacacggag
agcgtggggccaggcagcccaaggggacccttcgttgtgcctcctgccccagcacacatc
ctactggaggctggcaaggaccccagcttcccccgcatcactgtgctgaagccctacaag
gacagcctggaggctcaggggaagaaagaggcgtctggccctcagcctgcagcccccctg
cccttcggggagccgtgcaccacgctgccccgagatcctcctcagccctgcccagcgggc
acccggccagcgccctctgcagccctgcccacctacagcacccacctgcagggtcctgcc
ggcagctacaccaccgtcacggccaccgcgtcggtgacagtggccctgcacccctcactg
cccggctcctaccccgccttcagccctgagggcttcaccagtggcgagcgggactgcctg
gacgagcccagcaccagcggcgccgctgtgcccgacacctttgagatgcagaacatggga
caccaccacggggcaggtgcctggcgctag

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