Zonotrichia albicollis (white-throated sparrow): 102063651
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Entry
102063651 CDS
T07911
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03013
Nucleocytoplasmic transport
zab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102063651 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
102063651 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zab03019
]
102063651 (THOC2)
03041 Spliceosome [BR:
zab03041
]
102063651 (THOC2)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102063651 (THOC2)
Spliceosome [BR:
zab03041
]
Complex C
Other components
EJC/TREX
102063651 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102063651 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
102063651
NCBI-ProteinID:
XP_026647742
Ensembl:
ENSZALG00000018246
LinkDB
All DBs
Position
Unknown
AA seq
1608 aa
AA seq
DB search
MAALLPAEWIKNWEKGGKSEFVQLCRALSENKNHDVGFRDIQQALYELAYHVVRGNLKHD
QASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKNKRDHFTQLVLACLYLVSDTVLK
ERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLS
GNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTL
CHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIV
EAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWHHAQSI
MDQMPPFYSTSHKPIAVALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQAESF
EELRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEVGTVKKFVSDRVVKFQSDGSKQ
EDKDKMETLFSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNE
TYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKY
DNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVF
RKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLK
AEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVVFQEGGEKHLKLVGKLY
DQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKY
DELKKAEKGNKQQHKVHKYITSCELVMAPVHEAVISLHLPKVWDDISPQFYATFWSLTMY
DLAVPHSSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQ
RVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPN
FSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGF
LTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKI
LPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKD
PPARNAVPATVQNGPGGAGMPTSLTINTVRLEEGTTEETADKLKEKSQGVVKVINKTVNA
TPKVTTSNGNSASNSKIIKEKDDKEKSGKEKDKEKKDKTPAATPEMKALGKDGKDKPKEE
RANKEEKAREIKEKTPKSDKEKEKVKKEEKASKEEKSKTVVTIIESKSTAEKEREKEPSR
ERDLAKEMKSKENAKGGEKVPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVK
DNLNELKESSAKHYINHTTPTLSKSKEREVEKKDLDKSRERSREREKKDEKDRKDRKRDH
SNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKEKGDSI
KAEKMEKSSSGSKKESRHDKEKAEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctcccggccgagtggataaagaactgggagaaaggcggcaagagcgag
tttgtgcagctgtgtcgtgctctcagtgaaaacaaaaatcatgatgtgggtttcagagat
attcagcaggctttgtatgagcttgcttaccacgttgtcagaggaaacttaaagcatgat
caagcttctaatgttcttggtgatgtcatagaattccgagaagacatgccttctatccta
gctgatgtgttctgcatattagatattgaaacaagttgtttagaagaaaaaaataagagg
gatcattttacacaactggtattggcctgtttgtatcttgtatctgacactgtcctaaag
gagcgtttagatccagagacactggagtcattgggactcatcaagcagtctcaacagttc
aatcaaaaatctgttaaaataaagacaaaactattttataagcaacagaagtttaatttg
ctaagagaagagaatgaaggttatgcaaagcttattgcagaattgggtcaagacttatct
ggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgtttcaat
cttgatcctaatagagttttggatatcatcctagaagtctatgagtgcaggcctgagtat
gatgatttctttgtaccactgatagagtcttacatgtacatgtgtgaacctcaaactcta
tgccatatccttggattcaaattcaaattttatcaggatccaagtggtgagaccccttcc
tccttatacagagttgctgctgtccttttgcaacataatctcatagacttggaagatctt
tatgttcatcttctaccaggggataatgccatcattgaggaacacaagcgagagatagtg
gaagctaaacaaattgtcagaaaacttaccatggttgtcttatcatctgaaaagactgag
gaaaaagagaaagaaaaggaaaaagaggaggagaaaacagaaaagcctcctgataatcaa
aaacttggtttattggaagccttattaaagattggtgattggcaccatgcccaaagcatt
atggaccagatgcctccgttttactccacctcgcacaagccgatcgccgtcgcgctgtgc
cagctcgtccacgtcaccattgagcctctgtaccgcagagttggtgtacctaaaggagct
aaagggtcaccaatttcctctttgccaaacaagagagcaccaaaacaagcagagagcttt
gaggaattgagaaaggaagtgttcaacatgctttgttaccttggtcctcatctgtcccac
gatcccattttatttgcaaaagtggtgcgccttggaaaagcatttatgaaagaggttgga
actgtgaagaaattcgtcagtgacagagtggttaagtttcagtctgatgggagcaaacag
gaagataaagacaaaatggaaacactgttcagctgtttgttgagcattactgatcaagtc
ttgcttccatctctttccttgatggactgcaatgcatgcatgtctgaggaattgtggggg
atgttcaaaacctttccataccagtaccggtaccgcctctatgggcaatggaagaatgaa
acgtacaacagtcacccactgcttgtgaaggttaaagcccaaaccatagatagagccaaa
tacatcatgaagcgtttaactaaggaaaatgtgaaaccctctggaagacaaattgggaag
ctcagccacagcaatcctacaattttatttgattatattttatcacaaatacaaaaatat
gataacttgataactccggttgttgattcgctgaaatacctcacttccctgaactatgat
gtcttggcatattgtatcattgaagcattggcaaaccctgagaaggagagaatgaagcat
gatgacactacaatctcaagctggcttcagagtctggcaagtttttgtggtgccgttttc
cgaaaatacccgattgaactggcaggcctcctgcagtatgtagccaaccagctgaaagct
ggcaaaagctttgatttgcttattttaaaagaggtggtgcagaaaatggcagggatagaa
attactgaagaaatgaccatggagcagttggaagccatgactggtggagagcagctgaaa
gctgagggtggatactttggccaaatcaggaatacaaagaaatcatctcagagattaaaa
gatgcgttattggaccatgatcttgccctcccactgtgcctgcttatggctcagcagaga
aatggtgttgtctttcaagaaggaggggaaaaacatctgaagctggtgggaaaactgtat
gatcagtgccatgataccctggtacagtttggtgggtttttagcatccaatctaagcaca
gaggattacattaagcgagtgccttctattgatgttctctgtaatgagtttcacacaccc
catgatgctgcatttttcctctcaagacctatgtatgcacaccacatttcatcaaagtat
gatgagctaaaaaaagctgagaagggaaataaacagcagcacaaagtgcacaaatacatt
acatcttgtgagttggtgatggctcctgttcacgaagctgtgatttccctgcacctccct
aaagtctgggatgacatcagccctcagttttatgctacattctggtctttaacaatgtat
gaccttgctgtgccacacagcagctatgacagagaagtcaataaacttaaagtccagatg
aaagccatagatgacaatcaggaaatgcctccaaataaaaagaaaaaagaaaaagaacgt
tgcacagccctgcaggacaagctccttgaagaggagaagaagcagttggagcatgtgcag
agggttctacagagactgaaactagagaaagataactggcttctggcaaaatctaccaaa
aatgagactatcaccaaatttttacagttgtgtatatttcctcgctgcattttctcggca
attgatgcagtttactgtgctcactttgttgaactggtgcatcagcagaaaacacccaat
ttctccacacttctctgctatgaccgagttttctctgatattatatatacagttgcaagt
tgcacagaaaatgaagccagtagatatggcaggtttttgtgctgtatgctggagactgtg
accaggtggcacagtgacagagtcatatatgaaaaggagtgtggcaactatccaggtttc
ctgactatattacgagcaactgggtttgatggtggaaacaaggctgatcaactggattat
gagaattttagacacgtggtacacaaatggcactataaattaactaaggcttctgtgcac
tgtctggaaacaggtgaatatacacatatcagaaacatcctgattgtgctgaccaaaatc
cttccatggtatccaaaagtgctgaacctgggtcaagccttggaaagaagagtacacaag
atatgtcaggaagagaaagagaagagacctgatctatatgcattggctatgggctattct
ggacagttgaaaagtaggaagcctttcatgatacctgaaaatgaatttcaccacaaagac
ccacctgccaggaatgctgtacctgcaacagtacaaaatgggccaggtggtgctgggatg
cctacgtctctcacaataaatacagtcagactggaagagggcactactgaggagactgca
gataaactaaaggagaagtctcagggtgtggtgaaagttattaataaaactgtcaacgct
acaccgaaggtgacaacaagcaatggaaacagtgcatctaatagcaaaattattaaagag
aaagatgataaagaaaaaagcgggaaggaaaaagataaagaaaagaaagacaagactcca
gctgccactccggagatgaaggcacttgggaaagatgggaaagataaaccgaaggaagaa
cgggcaaacaaagaggagaaagcaagagagatcaaggagaaaacaccaaaatctgacaaa
gagaaggaaaaggtgaagaaagaagaaaaagcttcaaaagaagaaaagtccaagacggtt
gtaaccatcattgagtcaaagtcaactgcagagaaggagagagaaaaggagccatccaga
gaaagagatctagcaaaggaaatgaaatccaaggaaaatgctaaaggaggagaaaaggtg
ccagtagctgggtccttgaagtcacctgttccccgatcagaaacatcagaatctgaaagg
gaacaaaaacgccgcaaagttgatacacattcttctccgtcacattcctcaacagtaaag
gacaacctcaacgaactcaaggaatcttcagcaaagcactacataaaccacactactcca
acactgtccaagagtaaggagagagaagtggagaagaaagatttggacaagtcaagggag
agatccagagagagagagaagaaagatgaaaaggacaggaaagatcgaaaaagggatcat
tcaaacagtgaccgagaggtgccccaggattcaactaaacgacgcaaagaggaaaatggc
acaactggttcttcaaaacatagcaaaagtgaaagtccttctgattcccctcgcttaaat
gaaaaagagaaggagaaaaacaaatcaaaatcttcaggaaaagagaaaggtgattcaatc
aaggcagaaaagatggagaagagctcctctggtagcaaaaaggagtcaagacatgataaa
gaaaaagcagagaagaaagaaaagcgagacagtactggggggaaagaagaaaagaaacat
cataaatcatcagacaaacatagataa
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integrated database retrieval system
