KEGG   Zonotrichia albicollis (white-throated sparrow): 102064000
Entry
102064000         CDS       T07911                                 
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
  KO
K06237  collagen type IV alpha
Organism
zab  Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04382  Cornified envelope formation
zab04510  Focal adhesion
zab04512  ECM-receptor interaction
zab04518  Integrin signaling
zab04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:zab00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102064000 (COL4A5)
   04518 Integrin signaling
    102064000 (COL4A5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102064000 (COL4A5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102064000 (COL4A5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    102064000 (COL4A5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zab04147]
    102064000 (COL4A5)
   00536 Glycosaminoglycan binding proteins [BR:zab00536]
    102064000 (COL4A5)
Exosome [BR:zab04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   102064000 (COL4A5)
Glycosaminoglycan binding proteins [BR:zab00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102064000 (COL4A5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 102064000
NCBI-ProteinID: XP_026647720
LinkDB
Position
Unknown
AA seq 1535 aa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NT seq 4608 nt   +upstreamnt  +downstreamnt
atgaagggtgaagcaggtgaaataattacatccttgctgccaggacagaaaggtgaccca
ggatttccaggtcttccagggatacctggcccccctggctccatgggaataccaggtcca
gttggccctccagggcccccaggtttgacgggacctcctggtccaccagggctgccagga
cccaagggtaatatgggtttgaatttccaaggacccaaaggtgaaaaaggtgaacaaggt
cttcagggacctccagggccaccaggacaaattggagaacagaaaagacccaatgacatt
gaatttcagaaaggagatcagggtattccaggtgatccaggcccaccaggatttcctggg
cctccaggccctcctggtcttcccggtggtgtgaaaggtgaaaaaggtgagcaaggagaa
ccaggcaaaagaggaaagcctggcaaagatggagaacctggtcagcctggtagggatggt
ttacctggtgggcctggaataaatggtgctccaggaagagatggtgaaaagggtgaaaaa
ggtgacatgggtccccctggtcctcctggaattgttgttccaagaccaggcattgatgca
acagtgggaccaaaaggtagcaaaggattgccaggacttccaggagccaaaggggaccgt
ggattctctggtaggccaggcccacctggcttgccaggatctccagggatcactactgtt
ggacctcctggcccacctggcttacctggtgagagaggacagaagggggatccaggttta
cctggggtttctattcctgggcaaccaggagttgagggaccacgaggaccgccaggacca
ccaggtcccccagggccacctgcaccatctgttgctcctggtgaagggttatgtgagcaa
ggaccaccaggtcctccaggaattccaggacaacaaggttttacaggggagcgaggccaa
aaaggtgaccgaggagacacatgcttcaactgcataggaactggagtaactggtcctcct
ggggagaggggaccaccaggacctcctggtagtccaggttctcctggttttcctggacca
aaaggtgaaaaggggcttcctggattaactggccttgtagggccaccaggcttcccaggc
accccaggtgctcctggcagacctggtcctaaaggtgacccaggggatgtcctgacttct
ccaagattgaaaggtgacaaaggagaccctggcttcccaggacctccaggtctccctggc
atagatggcactcctggacgagatggactgccaggtttgcctggccctaagggggaacct
ggcagtgttgcattcaaaggagaaatgggtattccaggtgacccagggataccaggtctt
cctggtgaaaaagggcttcctggacctcctggttttggtccacaaggctcacctggtgaa
aagggcatccaaggtgtatctggccgtccagggcctcctggtgtcccgggtccaaaaggt
gaccctggccaaactattacagaaccaggagttccaggtccccctggtcctccaggaaga
attggtgatccaggtcttccaggagatcctggtcagccaggtcagcgtggtttacctggc
atcccaggtgcaaagggagagccaggtattcctggcattggacttccaggtccaccaggc
ccaaagggtttcccagggactccaggcctgcccggagctccaggaactccaggtcgccct
gggctggatggacctcctggaccacctggtttcccaggagagaagggagagcgtggattt
ggagttccaggaccacctgggcccccaggacccccaggcataaaaggagttcaaggacct
aaaggtgatcctggtttcccaggaaaccctggtctaccaggccgggcaggatttgatgga
accccagggcccaaaggtgaccctggaccaagtggaccaccaggacttccaggcccacca
ggcatccctggcattggtggccaaggtcctcctggatctccaggacctccaggtcctgtt
gggcccccaggtcccccagggctgcaaggcattccaggggagaaaggggatccaggtcct
ccaggcttcgacattcccggtcctccaggtgaccaaggagctccaggatatccaggaccc
cctggactaccagggcctcagggttcacctgggccccctggcagggatggaatacctgga
tttccaggtgccaaaggtgagatgggtgtcatgggagctcctggtcctccagggcctcca
ggaactcctggaagaaatggtctgcctggcttgaaaggtaatagtggattacctggtcca
ccaggacctcctggaccagtggggcagaaaggcatcaaaggtgaagcaggtctgccaggt
ccaccaggaacacttgatcccaaacagctgggagcaaaaggagaaaaaggcgagccgggt
gttccaggtgttcctggtttatcaggccagaaaggttatcaaggtctcccaggtgaccca
ggcccaccaggacttagtggcccaccaggtgtgccaggattgccaggcatcaagggagac
atggggcttcctgggcagccaggaccaacaggacctccaggattaaaaggagctatggga
gagatggggcttccaggtccccctgggcttaaaggcaaccaaggactggcaggacgtcca
gggcagcctgggcctgcaggatttcctggactgaaaggggagaaaggtgaccctggtctt
tcaggcattggtattcctggtccccctggaccaaagggagatcttggcttgcctggatac
ccaggtagtccaggtgcaaaaggtatagctggaaatcctggtttgcctggatttccaggc
agtccaggtgcaaaaggagaaccaggccttcctggattcccaggaacaccaggaattcca
ggaccaaaaggtattgagggccctccaggtaatcctggcctgcctggaccacctgggcca
gtaggtgatattggtcgtcctggccctcctggtccttcaggggaaaagggacagcctggt
cgagatggtatccctggaccagcgggtcagaagggtgaaccaggtctaccaggttttggg
cgtccaggaccccctggactcccaggattgacagggcaaaaaggagaattgggattacct
ggtccaccgggaccccctggacttcaaggcccgaagggagaaccaggtttccagggattc
cctggtctgcagggtccaccaggtctaccaggaataccagggccacctctggaaggtcct
aaaggtagccctggcccaccaggtgttccaggaaggccaggtccaccaggcccagaaggt
ccacgagggccaccaggcagtggaggacttaaaggggaaaaagggaacccaggtccacct
ggtccacctggcctgactggtccaaagggagatcaaggaccacctggacgccagggggat
cctgggcgtccaggtctgaatggaatgaagggtgaccctggggttccaggcgttccagga
ttcccaggtatgaagggtcccactggacctgcaggacccgctggccacacgggcagccag
ggagtgccaggcccaccaggtccgccaggtttacccggtaccattggacgaagcattgtt
gtcaaaggtgatcctggttccccaggtcctccaggccagcctggctccaaagggccacct
ggaatgccagggccacagggattgccaggtccaattggtcttcctggtgacccagggaga
gatggacttcctggttttgatggtccagcaggacgaaaaggagagagaggtcttccaggc
caaccagggtcacgaggagtacaaggacctcctggtcctgacggtttacaaggcccacct
ggtcttcctggaacagcttctgttgctcatggattccttataactcggcacagccagacc
agggatacaccactatgtccacagggaacagcaagaatatatgatggattctctcttcta
tatgtgcaaggaaatgagagagcacatggccaggatttgggtactgctgggagctgtctt
agacgtttcagcaccatgcccttcatgttctgcaacatcaacaatgtttgtaactttgca
tcaaggaatgactactcctactggctgtcaacccctgagtcgatgccgatgagcatggag
ccactgactgggccaagcatccagcccttcatcagccggtgtgttgtgtgtgaagctcct
gctatggtgatagctgtccacagccagaccattcagatcccttcatgtcctccaggctgg
gactccctctggattggttactctttcatgatgcacacgagtgctggagcagagggctct
gggcaggccttggcctctcctggctcctgtttggaagagttccgctcagcgccgttcatc
gaatgccatggccggggcacctgcaattactatgccaattcctacagcttctggctggca
actgtagaggtgtcagaaatgttcagcaaacctcagtctgagacactgaaagctggagac
ttgaggacgcggattagtcgttgtcaagtttgcatgaagaagacgtaa

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