Zonotrichia albicollis (white-throated sparrow): 102064061
Help
Entry
102064061 CDS
T07911
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04512
ECM-receptor interaction
zab04514
Cell adhesion molecule (CAM) interaction
zab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102064061 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
102064061 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102064061 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zab04131
]
102064061 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
zab04090
]
102064061 (SDC1)
00535 Proteoglycans [BR:
zab00535
]
102064061 (SDC1)
Membrane trafficking [BR:
zab04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
102064061 (SDC1)
CD molecules [BR:
zab04090
]
Proteins
102064061 (SDC1)
Proteoglycans [BR:
zab00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
102064061 (SDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Glycophorin_A
DUF7691
Motif
Other DBs
NCBI-GeneID:
102064061
NCBI-ProteinID:
XP_005485169
Ensembl:
ENSZALG00000004130
UniProt:
A0A8D2M7I1
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MINVVLLWLVALCFQAAVPQTTNLNLPPEDLDSSGDEEDAFSGSGAGPLTDQSRTWKIPG
ESTNSSIVAASVDFSEQPFHGIESRTEKEAVSPSATSNPVTEKPVVAVRDELSVLGSPDG
KPTSHVVTTTVRSPTAHFPSVVHVTPSEAPAVVHELEPQIPSSDVPDTKDVPEPHSTVHG
EGEVAATAAATAPGDVAPTHEEVSEVGSGDPGDFILTKDEEFLPTQNSEVLADSERNAKA
AGASGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQK
PHKQEEFYA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgataaacgtggtgctcctgtggctggtggccctttgcttccaggctgctgtcccgcaa
actacaaatctgaaccttccccctgaagaccttgattcatctggtgatgaggaagatgca
ttctcaggttcaggtgcaggtcccctgactgatcagtctcgcacctggaaaatcccagga
gaatcaactaattcctcaatagtggcagcatcagtggatttcagtgaacagccatttcat
gggattgagagcagaactgaaaaggaagcagtgtctccttctgcaaccagtaatccagtg
acagagaaaccagttgtagctgtgagggacgaattatccgtcctgggctcacctgatggg
aaaccaacaagccatgtagtcacaacaacagtgagaagtcccactgctcactttccttcc
gtggttcatgtgactccttcagaagcccctgctgtggtccatgagcttgagcctcaaatc
cccagctctgatgtgccagacaccaaggatgtccctgagccccactctactgtccatggt
gagggcgaggtggctgccactgctgcggccacagctccgggggatgtcgctcctacacat
gaggaggtttctgaagttggctctggagacccgggagacttcatcttgactaaagacgag
gaatttctccccacccagaactcagaagtactggctgactctgagaggaatgccaaagca
gcaggagcctcagggattatggacagaaaagaagttcttggaggtgttattgctggagga
cttgtaggcttggtgtttgcagtgtttctagttgcatttatgctgtacagaatgaagaaa
aaagatgaaggcagctattcactggatgaaccaaaacagtctaatggaggataccaaaaa
ccacacaaacaagaggaattctatgcataa
DBGET
integrated database retrieval system
