Zonotrichia albicollis (white-throated sparrow): 102064286
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Entry
102064286 CDS
T07911
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
102064286
NCBI-ProteinID:
XP_005481160
Ensembl:
ENSZALG00000004255
UniProt:
A0A8D2QBI4
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSNLGKEKDCKEKDPKVQSSKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHLLPSAVK
ELTQLTELYLYSNKLQCLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatctaggaaaagaaaaggactgtaaagagaaggatccaaaagtccaatcg
tcaaaagaaagggagaaggaggcgaaggcctccggaggatttgggaaagagagcaaagag
aaggagcctaagaccaaagggaaagatgccaaagacggaaagaaggactccagtagcacg
cagcctggggtagctttttcagtggacaatacgataaaaagacctaatcctgccacaggt
actcgcaaaaaatccagcaatgctgaagtgatcaaagagctcaataaatgccgggaggag
aattccatgcgcttggacttgtccaagaggtctatacacttgcttccatcagctgtcaaa
gagctaacgcagctgacagaactttatttatacagtaacaaactgcagtgcctgccagca
gaggtgggctgtctggtgaacctggtgacgctggccctgagtgaaaactcactcaccagt
ttgcctgactctctggataacttgaagaagctgcgcatgcttgacctgcggcacaacaaa
ctgcgagaaatcccctcggtggtgtacaggctcagctccctggccacgctgtacctacgc
tttaatcgcataactactgtggaaaaggatatcaaaaacttgtcaaaactcaccatgctt
agcatacgagagaacaaaatcaagcagctacctgctgaaattggtgagttgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgaacatcttccagaagagattggaagctgc
acgcagatcaccaaccttgacttgcagcacaatgagctcctggacctgccagaaaccata
ggaaatctgtccagtctaagtcgtcttggcctgaggtacaataggctgtcagcaattccc
aagtctttagcaaaatgcagtgaacttgatgagctgaacttggagaacaacaacatttct
actttaccagagggtcttttatccagccttgtcaaactgactagtttaacattggccagg
aactgcttccagtcctatcctgtgggtggcccgtcccagttctccacaatctactctctc
aatatggagcacaaccgcatcaataaaatcccctttggaattttctccagagctaaagta
ttaagtaagctgaacatgaaggacaatcagctgacatctctccccttggactttgggact
tggacaagtatggtagaactgaacttagcgacgaaccagctcacaaaaatccctgaggat
gtctctgggcttgtttctcttgaggttcttatcttgtcaaacaatctcctaaagaaactt
ccccatggaattggaaatctgcggaaactccgagagttagatctagaggaaaacaaactg
gaatccttgccaaatgaaatagcttacctcaaggatctgcagaaattggttctgactaac
aatcagctgaccacccttcccagaggaattggtcaccttaccaatctgacgcaccttggg
ctcggagagaaccttctcacacaccttcctgaggaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctgcacagccttccctttgagctggctctttgc
agcaaactgtcaataatgagtattgagaactgcccactcagccaccttccacctcagatt
gttgcaggaggaccctccttcatcatccagttcctaaaaatgcagggaccatatcgtgcc
atggtctga
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