Zonotrichia albicollis (white-throated sparrow): 102064306
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Entry
102064306 CDS
T07911
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
FN3_Tor_3rd
DUF4998
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
102064306
NCBI-ProteinID:
XP_014123950
Ensembl:
ENSZALG00000010040
UniProt:
A0A8D2MS15
LinkDB
All DBs
Position
Unknown
AA seq
1469 aa
AA seq
DB search
MLIHTWFFLACLPVLSHVWGRVGQGSGRLKLTVLSEDRLQMKWKETEGNINGYKVRVKPM
AGDSEQEVMLKTKTPKATVGGLSPTKEYTLQVYVLNGSQEALFAKRKFVIEELRNASQTR
NSRRNAGAASGKNLTSAAEHSGVAEDTPPPLNTALPHSAKDRAERKRQKGVQPKSSGETT
RNQPSVEVSMTETASTTPKSSQHTPASTERETPGKEKPPKDSLRRGSQFQCDTPAMTDIV
LLVDGSWSIGRNNFKLIKEFLSNLISPFSIAEDKIRVGLSQYSSDPRTEWDLSAHSTREQ
LLEAMRNLRYKGGNTFTGLALTHVLEQNLKPDAGARLEAEKLVILLTDGKSQDDANLAAQ
TLKNLGIEIFAIGVKNADEAELRQVASEPLELTVYNVLDFPLLSSLVGKLTRVLCTRIKE
RSHKESAGSAVKDTPVSTGPQLSPTDLKISAVTSKSMHLAWSPPLRPPKKYRVVYYPSKG
GTPREVLLEGAVSSLQLSNLTSHTEYLVSVIPVYDSAAGDGLRGVTSTLPLSSPRSLRVS
ERSHNSLRLSWEAAQGATHYLVLCSAAPDGAEDYTTEMKVTQPEVLLEGLSPSTGYSVAV
YAMYGEDASDPASIQETTLALSPPRYLSFSELSHASVRVSWEPAAPAVRAHHLTYVSGRG
GNAGQVEVPGTATSTVLRPLSSLTQYFISVRSTYDEGDSFPITGNVTTLKVPPPRALKVT
ELSGNSLRLQWEAVAASDVVVYQIKWSTASGEKPQELSLAGNVATAVLPGLQKNTDYKIS
IWAYYKDGARSDTVSVHHRTNSRSPPTNLFISSETPSSLQVHWTPPDGRVQHYKITYSPV
SDAAAQQSIMAPGKSSSVTLQSLLPDRAYKVTISAIHYTGESESTSTTGRTAPVLYKFPS
IRGFIPPKAEACPTITSREGSIRGFDMMEVFGLVEKEYSSIKGVALEPFVFSGSRTFTLF
RDIQLTQRTSDVHMFAIPPEHTIVVLLRLLPDTPKEPFAVWQVTDEDFQPLLGVNLDPSK
KSLTYFNHDYKGDLQEVSFDEQEVKKIFYGSFHKVHVAVSHSKVKLYVDCKKTGEKPLNT
LGSISTAGFIMLGKVTRTRGPRSGSVPFQLQSLQLLCSSVGAEQDRCCDLPALRDEDTCP
TLAPACSCTSGHPGLPGPPGPPGSPGRRGPQGEQGEPGPKGEPGPPGQVGPAGPSGQQGS
PGSQGITVQGPVGPPGIKGEKGDTGIPGMQGIPGVQGAPGRDGLQGAKGVRGLEGTAGPP
GPPGPRGFQGATGTRGSSGEKGPPGDVGPTGLPGPKGERGEKGEPQSLATIYQLVSQACE
RMIQTHVLKFDSFIHEHARKPVPIWEERLKPGEPGPPGPPGPPGNSGERGENGSPGQPGK
DGYPGERGAPGPKGEKGMSGASEEGSQGPRGRTGPPGEVVQGKPGPKGIPGSVGPPGFPG
ARGQPGQPGQPGGCDISGCYEADRRDFVP
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgctgatccacacttggttctttcttgcctgcctgcctgtgctgagccatgtctgggga
cgagtgggccaagggtcaggccggctgaaactcactgtcctctcagaagacaggctgcag
atgaagtggaaagagactgaggggaacatcaatggctacaaagttcgggtaaagcccatg
gcaggggactcggagcaagaagtcatgctgaaaaccaagactcccaaagccacagtggga
gggctgagccccaccaaggaatacaccctgcaggtctacgtgctcaacggctcccaggaa
gccctgtttgccaagaggaaatttgtgatagaggagctcagaaatgcatcccagaccaga
aacagccgcaggaacgcaggagctgcgtcaggaaagaatctcacctcagcagctgagcac
agtggggtggctgaggacaccccaccacccctgaacactgccctgccacactcagcaaag
gacagagctgaaaggaaaaggcagaagggggttcagccaaagagctcgggagaaacgaca
agaaaccagcccagtgtggaggtcagcatgacagaaacagcatcaacaaccccaaaatca
tcccagcacactcctgcaagcacggagcgagagactccaggaaaagaaaaacccccaaag
gattcactgagacgaggctcccagtttcagtgtgacactcctgccatgactgacattgtc
ctgctcgtggatggctcctggagcatcgggcgcaacaatttcaagctcatcaaggagttc
ctgagcaatttgatttccccattcagtattgcagaagacaagatcagagtagggctgtcc
cagtacagcagtgaccccaggacagagtgggatctgagtgctcactccaccagggaacag
ctgctggaggccatgaggaacctgcggtacaagggcggcaacacctttacaggtctggcc
ctgacccacgtcctggagcagaatctgaaaccagacgctggtgcccggctggaggctgag
aagttggtaatcctcctgactgatgggaagtcccaggatgatgccaacctggctgctcag
accttgaaaaacctgggcatagagatatttgccattggggtgaagaacgcggacgaggcg
gagctgcggcaggtggcctcggagccgctggagctcaccgtctacaacgtgctggacttc
cccctgctcagctccctggtgggcaagctcacacgggtcctgtgcaccaggatcaaggag
aggagccacaaggaatccgcaggcagcgctgtgaaagacacccctgtgagcacaggtccc
cagctcagcccaactgacctgaaaatatctgctgtgacctccaagagcatgcacttggcc
tggagccctcctctgagaccaccaaagaaatacagggttgtgtattatccatccaagggt
gggacccccagagaggtgcttttggagggagcagtgtcctccctgcagctgtccaacctg
acctcgcacacggagtacctggtgtcggtgatccccgtgtacgacagcgccgcgggtgac
gggctgagaggagtcacctccaccttgcctttgtcttcccctcgctccctgcgcgtctct
gagcggagccacaacagcctgaggctgagctgggaagcagcccagggagccacacactac
ctggtgctctgctctgcagcccctgatggagcagaggactacacaacagagatgaaggtg
acccagcccgaggtgctgctggaggggctgtcccccagcacggggtactctgttgcagtg
tatgccatgtatggggaagatgccagtgatccagccagcatccaggaaaccaccttggcc
ttgagtccccccaggtacctgagcttctcggagctgagccacgcgtccgtgcgggtgagc
tgggagccagcggcgccggccgtgcgcgcccatcacctcacctatgtctctggcagaggg
ggcaacgctgggcaggtggaagttcctggcactgcaacatccactgtcctgagacctctg
tcttccctcacgcaatacttcatcagtgtcagatccacatatgatgaaggggactccttt
ccaattactggcaatgtcaccaccttgaaggtgccccctccccgtgccctgaaggtcact
gagctctctgggaacagcctccgcctgcagtgggaagctgtggctgcctcggacgtggtt
gtctatcagatcaagtggagcacagccagtggagagaagcctcaggagctctccctggct
ggaaatgtggccacagccgtcctgcccggcctgcagaagaacactgactacaaaatatcc
atctgggcctactacaaagatggagctcggagtgacactgtgtctgtccaccacaggacc
aattcccggagcccacccaccaacctcttcatcagctctgagacccccagcagcctccag
gtgcactggacccctcctgatggccgagtccagcactacaaaatcacctacagccctgtt
tctgatgctgctgcccagcaatctatcatggctccaggcaaaagcagcagtgtcaccctg
cagtccctgctgcctgatcgagcctacaaggtgaccatttctgccatccactacacggga
gagagcgagagcacctccaccacgggccggacagctccagtgctgtataaattcccctcc
atccgaggattcatcccacctaaagcagaggcctgccccaccatcacctccagagaaggt
tccataagaggatttgatatgatggaagtttttggcttggtagagaaggaatattcctcc
attaagggcgtggccctggagccctttgtgttcagcggctcccgcaccttcaccctgttc
agggacattcagctcacccagaggaccagtgacgtccacatgtttgccatcccgcctgag
cacaccatcgtggtcctgctgcgcctgctgcccgacacgcccaaggagccctttgccgtg
tggcaggtcacggatgaggacttccagcctctcctgggcgttaacctggaccccagtaag
aaatccttgacctatttcaatcacgactacaagggtgatctacaggaagtctcctttgat
gagcaggaagtgaagaagatattttatgggagctttcataaggtgcacgtggctgtgagc
cactccaaggtcaagctctacgtggactgtaagaaaacaggagagaagcccctcaacacc
ctgggcagcatctccacggctggcttcatcatgctgggcaaagtgacgcgcaccagaggg
ccccggagcggctccgtgcccttccagctgcagtctctgcagctcttgtgcagcagtgtg
ggggcagagcaggacagatgctgtgatctccctgcactgagggacgaggacacctgccct
accttggctcctgcctgttcctgcacttctgggcacccaggcttgccaggacccccaggg
ccccctggcagccctggcaggagaggacctcagggggagcagggggagccaggacccaag
ggtgagccaggcccccccggacaagtgggaccagcaggccccagtggccagcaaggctct
ccaggctcccaaggaatcacagttcagggccctgtggggccaccaggaattaaaggagag
aaaggagacactggaatccctggcatgcagggcattcctggtgtgcagggagctccgggc
agagatggacttcaaggtgcaaagggggtgaggggactcgaaggcacagctgggcctcca
ggacctcctggaccaaggggtttccaaggagccacaggcacccgaggcagcagtggtgag
aagggacctccaggtgatgttgggccaacagggctgccaggtcccaaaggagaaagagga
gagaaaggggaaccacagtctttggccaccatttaccagctggttagccaggcctgtgag
aggatgatccagactcatgtgttgaaatttgattcattcatacatgaacatgcaaggaag
ccggttcccatctgggaggaaaggttaaaaccaggagaaccaggaccaccaggtcctcca
ggcccacctgggaacagtggagaaagaggagaaaatggcagccctgggcagccaggcaag
gatgggtatccaggagagagaggtgccccagggcccaaaggagagaaagggatgtctgga
gccagcgaggaagggagccaaggacccagaggcagaacaggcccaccaggagaggttgtg
caggggaaaccaggtcccaagggcatccctgggagtgttggtcctccaggtttccctggt
gccagagggcagcctgggcagcctgggcagccggggggctgtgatatctctggatgttat
gaggctgatagaagagattttgtcccctga
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