Zonotrichia albicollis (white-throated sparrow): 102064515
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Entry
102064515 CDS
T07911
Symbol
PASD1
Name
(RefSeq) circadian clock protein PASD1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zab03000
]
102064515 (PASD1)
Transcription factors [BR:
zab03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102064515 (PASD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
TED_2
Motif
Other DBs
NCBI-GeneID:
102064515
NCBI-ProteinID:
XP_014120755
Ensembl:
ENSZALG00000000976
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MDEDEKDRAKRASRNKSEKKRRDQFNVLIKELCTMLQGHGHPLKMDKSTILQRTIDFLQK
QKEITAQTEACQIRQDWKPSFLSNEEFTQLMLEALDGFLIALTTDGIIIYVSDSVSSLLG
HLPSDLVDQNILNFLPEGEQSEVYKLLSPHVLMTDPVAADFLNAEKQIEFFCHLARGSLD
PNEPLMYEYVKFVVDFKYFTHVPTPSCNGFESAIARAFRSAPEEQICLVATVRLVTPQFL
KELCNVEEPCEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHADDLELLAR
CHEHLMQFGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHLVVSYAEVRA
ERRRDLGLEESSIELASSSLKSHSSYLEVGQCGSSQDASREGVSLSSHSSRRSSHTTLSD
STSTSSMRRTDTSTPTRPGAPGDKAALRLAAPGGAQPVYHFPTQLGMMHQLKEQLEERTR
ILQADIKTQQEELHVIKEQLQLVQDSNLQMLMQQPIPVILNAAVQQPGPRRPQGTPRHST
AKKAQQPSLPGTKQHCSPQLLSPQPFLRDPCGTAPQVQQQKQQHPMRGSQGQQTCMPGQG
SIPMPFYNSPMVFSQAHPIAVAAQVPADSTERQTPAEYSQDRSLRMLLDQSIQAMMPTAN
SSCQPVQSSASRQQGKFVAEQQSLAPPAAQPATCSPARPAAPPPIFSPSLLVPHSSFTSH
QPSTPLHLHQWPQQQVQQHRLYLQMQGPELVPGAPTQRIFQPPHAPQQNPLSYFLHPQQQ
SHHTQGQPCNLPDLPEMQLP
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatgagaaggacagggcaaagagggcatcacgcaacaaatctgagaagaag
aggagagaccagttcaatgtcctcattaaggagctttgcaccatgctgcagggccatggc
caccctctcaagatggacaagtccacaatcctgcagaggaccatcgacttcctacagaaa
cagaaagaaatcacagcacagacagaagcctgtcagattagacaagactggaagccttca
tttcttagcaacgaggagttcacccagttgatgttagaggcactggatggctttctcatt
gctcttaccactgatgggattattatttatgtgtctgacagtgtttcatctctgctggga
cacttaccgtcagatttggtggaccaaaatatattgaactttctgcctgagggggagcag
agcgaggtatacaagctgctttctccacatgtgctcatgacagatcctgttgcagctgat
tttctcaatgcagaaaaacaaatagagtttttttgccatttagcaagaggcagcttagat
ccaaatgaacctctgatgtatgaatatgtgaaatttgtagtggattttaaatattttact
catgtgcctacaccctcctgtaatggctttgagtcagctattgcacgggctttcaggtca
gccccggaggagcagatctgcctggtggccaccgtgcgcctggtcacaccacagttcctc
aaggagctctgcaacgttgaagagccgtgtgaagaatttacatcgaggcatagtttagaa
tggaagtttttattcttggaccacagggctccacctattataggatatttgccctttgag
gttctgggaacgtcagggtatgattactaccacgcagatgacctggagcttcttgctagg
tgccatgaacacttgatgcagtttggaaaaggcaaatcctgttactataggttcctgacc
aaagggcagcagtggatatggctgcagactcactactacatcacctaccaccagtggaac
tccaagcctgagttcattgtttgcacgcatctggtagttagttacgcagaggttcgggct
gagagaagacgagatcttggcctcgaagagtcatcaattgaactggcatcctcttctcta
aagagccacagcagctacctggaggtggggcagtgcggcagcagccaggacgccagccgg
gagggagtgtcgctgtcctcgcacagctcccggcgctcctcgcacaccaccctgtccgac
tccacctccacatcgtccatgcggcgcacggacaccagcacccccacgcggcccggggct
ccgggggacaaggcggcgctgcggctggcggcgcccggcggcgcccagccagtgtaccat
ttccccacgcagctggggatgatgcaccagctgaaagagcagctggaggagaggactcgc
atcctgcaggctgacatcaaaacacagcaagaggagctccatgtcatcaaggagcagctc
cagctcgtgcaggactccaacctgcagatgctgatgcagcagccgatccccgtcatcctg
aacgcggccgtgcagcagcccggcccccggcggccccagggcacgccccggcacagcacg
gccaagaaggcccagcagccatccctgcccgggacaaagcagcactgcagcccccagctg
ctgtcaccgcagccattcctcagggacccctgtggcactgccccccaggtacagcagcag
aagcagcagcaccccatgagaggaagccaaggccagcaaacgtgtatgccagggcagggc
agcatcccaatgcccttctacaacagccccatggtgttctcccaggctcaccccattgcc
gtggctgcacaggtgcccgctgacagcactgagaggcaaacaccagctgagtacagccag
gacaggagcctcaggatgctgctggatcagtccatccaagccatgatgcccacagccaac
agcagctgccagcccgtgcagagcagtgccagcaggcagcaaggaaagtttgttgcagag
cagcagagcctggctcccccagcagcacagccggccacctgcagccccgcccggcctgca
gccccgccgcccatcttctccccgtccctccttgtcccacactccagcttcacctcccac
cagcccagcacacccctgcacctgcaccagtggccacagcagcaggttcagcagcaccgc
ctctaccttcagatgcagggtcccgagctggtgcctggggctccgacgcagcgcattttc
cagccgccccacgccccgcagcagaaccccctgagctacttcctgcacccccagcagcag
agccaccacacacagggccagccctgcaacctgcctgacctgcccgagatgcagctgccc
tga
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