Zonotrichia albicollis (white-throated sparrow): 102064772
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Entry
102064772 CDS
T07911
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03440
Homologous recombination
zab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102064772 (PALB2)
03460 Fanconi anemia pathway
102064772 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zab03400
]
102064772 (PALB2)
DNA repair and recombination proteins [BR:
zab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
102064772 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
102064772 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
102064772
NCBI-ProteinID:
XP_026653504
Ensembl:
ENSZALG00000009089
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MTTKQKCRRSHGRRERSPTAESRGERGASSESRGERSASGLQCSDPDCSRDNTSPSADRD
GPSQLWTKTCSDAGTEKTAPVTVQHVPEFSSDEVSPQDSSRAESFQASQENLCCGTIRPG
PVEKKPQTSRGMMKLRRRTKALESKEGESVHDVHLISTGEMMKNQIASAEELQSPVFRHS
SVSHTEEPAQRAPGAVLVQEERNSFTPDAASGLVQDVFGGSVTAGEPELSPHALRDSRDI
RQPESSRAVATPDGHEPCSQHGDSVLLDPRGDGREESPSRVKQPEGESLCEDQGELRGLL
DLMSENQILPDSRNNTITEESKNHEGHQSDADTLNPCPADKALDTAEGLLENQHPEMESR
LSPAAKAVAPEGTLSSCTVVEGLLFPVEYYVRTTRRMSNCQRKVDLDAVILSQLGRSKKG
QRSKCKQKDANPNQPSQEGAEGDLEPGVEPFPFLGAENDQANSSSSQKSLPASGNSSTFL
ESISQKSITSTRQEQRQSQRKQKGRRKSACKAPMHPVSQELIESQDPTMANESSALLSNE
NQSEKENCDASLERSSSNERRLSGAAALGPAGPGVTGATQPAGPDPPQGGSLVPGKCHKA
LLEQVQHPPHSSDSLSPGSDAFASPVGDVEGSAAVCQGDKHPVQRVKRQRGAEQLPGVSV
PLRRSLRCSARHRPPTGSTDASSRGSSSPMGSQGPAALGLPAADPDTRGSLFSFHSLQWL
IPQLGIRDFHLPNEEFGVLKLEKLKSSPVNDLEDFVSGDGVAPEDTTDAQMKPEEKSLRS
NLILPSKTGLPELPCMEGLTSKKELSTHELLFTPMGTVLEAPTHPEPEISSSVFPAVGAT
PGVLPSVHTEVFPDTPSVSALPVTPSSPRGAAALVLGDVAHRDPAVPLHPDSCAAGAARN
QEEQGTALPSAAERGSENKSDETVSLEKHQQPENKEQESCRASPEQMKDVAEPLTAALPD
GPREESLQFVSELKEPWCSGAVDVGAVWWAAAGSRRELRVVTACESAVSLWQPRAPAGWA
RLHTWHLREIPVIQIVPLPDTCNLVCVALGELEIGEIRLLLYSSETDSFKHSLVKTGNIK
AVAGLKDWRLVSSSRTMQEQHVEMVFLSETGGSKDRQTLMPPEETVTAFAEVEGMSEALV
GTTAGNSVVVWNLRTGQLLRKMHIGYSYPASICHRAYSDSGLLFVVLSHPHAKESESCGS
PAFRVVAFNPRTGRSAPVTSCCLPPGPAGRYLEGDVWDTVGAAVLTSGAVAVWDLLRGRP
TAVLPPGPAGHWAL
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaagcaaaagtgcaggaggagccacggccggcgggagcggagccccacagct
gagagccggggagaacggggcgcctcaagtgagagtcggggagaacggagcgcctcaggt
ctgcagtgctccgatcctgactgttctagagataacacatctcctagtgctgacagagat
gggccctctcagttatggactaaaacctgctctgatgctggcacggagaagacagcacct
gtcacagttcagcatgttccagaattctccagtgatgaggttagcccacaggacagctcc
cgggcagaaagcttccaggccagccaggaaaacctgtgctgtgggaccatcaggcctggc
cctgtggagaaaaagccccaaacctcccgaggcatgatgaagctgcggagaaggacaaag
gctctggaatcaaaggaaggggaatcagtgcatgatgtgcatctaatcagtactggtgaa
atgatgaaaaatcaaattgccagtgcagaggagcttcagtcaccagtgttcaggcacagc
agcgtctcacacacggaggaacctgctcagagggcacctggggcagtgcttgtgcaggaa
gaaagaaatagtttcactcctgatgcagcatcaggacttgtacaggatgtgtttggtggc
agtgtcactgcaggagagcctgagctgtccccacatgcactgagggacagcagggacatc
cggcagcctgagtcctcaagggctgtggccacacctgatggacatgagccgtgctcacag
catggagattctgttttacttgaccccagaggtgatggcagagaagaatcccccagtaga
gtaaaacagccggagggtgagagtttgtgtgaggatcagggagaattacgtgggctcctg
gatttaatgtcagaaaatcaaatattgcctgacagcagaaataacaccataaccgaggag
agcaaaaaccatgaaggacatcaaagtgacgctgataccttgaatccctgtcctgcagat
aaagctctggacactgctgaaggactgctggagaatcaacaccctgaaatggagtcaagg
ctctctcctgctgccaaggcagtggctcctgagggcacactgagctcctgcacagtggtg
gaagggctgctcttccccgtggagtactacgtgcggacaactcgccgcatgtccaactgc
cagaggaaggtggacctggatgctgtcatcctcagccagctgggcaggagcaagaaaggg
cagcggagtaaatgcaagcagaaagatgcaaaccccaatcagccctcgcaagagggagct
gagggtgatttagagccaggggttgaacccttcccttttcttggggcagaaaatgatcaa
gcaaactcaagtagttctcagaaatcccttcctgcatccggcaacagcagcacttttctt
gaatccatttctcagaaaagcatcactagcacaaggcaagagcagagacaatcccagagg
aaacagaagggaagaagaaagtctgcctgcaaagcccccatgcatccagtgtcacaagag
cttatagagagtcaggatcccacaatggccaatgaaagcagtgctctgctgtcaaatgag
aaccagagtgaaaaggaaaactgtgatgctagccttgaaaggtcttcctcaaacgagagg
agactgtctggtgctgcagccctggggcctgcagggccaggagtgactggagctacccag
ccagcgggtcctgaccctcctcagggcgggagcctagtgccagggaaatgccataaggct
ctgttggagcaggttcaacatccaccccacagcagcgattccctgagcccagggagcgac
gcttttgccagccctgtgggagatgtggagggcagtgctgctgtgtgtcagggagacaaa
catccagtgcagcgtgtgaagaggcagcgaggagccgagcagctgcccggggtcagcgtc
cctctgcgccgctccctgcgctgctctgccaggcacaggcccccgacaggctcaacagat
gccagcagcagaggaagcagcagtcccatgggttcacagggtcctgctgcccttgggctg
cctgctgcggaccccgacactcgtggctccctcttctccttccacagcctccagtggctg
atccctcagctgggcatcagggacttccacttaccaaatgaggaatttggagtgctgaaa
ctggagaaattgaaatcatcccctgtgaatgacttggaggattttgtgtctggggatggt
gtggctccagaggacacaacagatgcgcaaatgaagccagaagaaaaaagtctcagaagt
aatttaattttgccttccaaaactggattgcctgaactcccttgcatggaaggcctgact
tccaagaaggagctttccacccatgaactgctgtttactcccatggggactgtcctagag
gctcccactcaccctgagcctgagatttcctcgtctgttttccctgctgtgggtgcaacc
ccaggtgttttaccttcagtgcacactgaggtgttccctgacacaccttctgtatctgcc
ttgccagtgaccccatcttcccccagaggagcagctgccctggtcctgggggatgtggca
cacagagaccctgctgtgccactgcatcctgacagctgtgctgcaggggctgccagaaac
caggaggagcaaggtacagcattgccttcagcagctgaaagaggttctgagaacaaatct
gatgagactgtgtccttggagaagcatcagcagccagagaacaaagagcaggaatcctgc
agagcttcacctgaacagatgaaggatgtagcagagccgttgaccgcagcgctgccggat
ggccccagagaagagagcttgcagtttgtgtcagagctaaaggagccctggtgctcgggc
gccgtggacgtgggcgccgtgtggtgggcagcggctggcagccgcagggagctgcgcgtg
gtcaccgcctgcgagagcgccgtgtccctctggcagccacgggcccccgccggctgggcc
aggctgcacacctggcacctcagagagattcctgtcatccagattgttcctctgcccgac
acctgtaacctcgtgtgtgtagcactgggagagctggagattggagaaataaggctcttg
ctttattcttctgagactgattcattcaagcactccctagtgaaaactgggaatataaaa
gcagttgctgggctaaaggactggaggctggtgagcagcagcaggaccatgcaggaacag
catgtggagatggtttttctctcagagacaggggggagcaaggacaggcagactctgatg
ccccctgaagaaacggttacagcctttgctgaggtagaagggatgagcgaggccttggtg
ggcaccactgcagggaacagcgttgtggtttggaatctgagaactggtcagctcctgagg
aagatgcacattggctattcctacccagcttccatctgccatcgagcatattctgactcc
ggccttctgtttgttgttttaagccaccctcacgccaaagagagcgagtcctgtggaagc
ccagcgttccgcgtggtggccttcaacccgcgcacgggccggagcgcgccggtgacatcc
tgctgcctgccccctggcccggccggcaggtacctggagggtgacgtgtgggacaccgtg
ggagccgctgtgctgacgtcgggtgctgtggccgtgtgggacctgctgcggggccgcccc
acggccgtgctgcccccgggccctgcggggcactgggctctg
DBGET
integrated database retrieval system
