Zonotrichia albicollis (white-throated sparrow): 102065315
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Entry
102065315 CDS
T07911
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab02010
ABC transporters
zab04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102065315
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102065315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zab02000
]
102065315
Transporters [BR:
zab02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102065315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
102065315
NCBI-ProteinID:
XP_026654777
LinkDB
All DBs
Position
Unknown
AA seq
1639 aa
AA seq
DB search
MAVGTQLGLLLWKNFTYRRRQRIQLAIEILWPLFLFLILISVRRSHPPFKQHECHFPNKA
LPSAGTLPWLQGIICNMNNPCFRHPTAGEAPGAMEGSFLSQMDFPRLLAEQLSSELGGIA
GTVEALGSFLRDAASLMEEVSMPSLAELRQEIEGLRAPNSSTGAFRALSRIACGHPEGGG
LRIPSLNWYEDNDVKAFLDRNTSEHKPVASGSTSPFCRELLHSLESSPLSQIFWRGIKPL
FVGKILYTPPGPGPDSVMAEVNRTFRELAVLGELGGAWQELGPRIYTILNSSLEMQVLQE
LLLAPSTAQILDGFLNGTSWKLPELVTFLTGPAGGPGLTWHQVYADVDAVLSTLSQFMEC
VCLDKIEAVATEEQLVARALELLEEQQFWAAVVFQPPINATAPGLPPHVRYKIRMDIDDV
TRTNKIKDRFWDPGPAADPFSDLRYVWGGFVYIQDLVEQAVVRVHTGAAPRTGVYVQQMP
YPCYVDDVFLRVLNRSLPLFMTLAWIYSVAMIIKGVVHEKETRLKETMKTMGLSSGILWL
SWFLSSFIPFLLSSALLVLILKLGNILPYSNPAVIFLFLGTFSVATISQCFLISTFFPRA
NLASACGGIIYFSLYLPYVLCVAWRDYITFPLRVLVSLLSPVAFGFGCDYFSLYEEQGVG
IQWHNLAASPVPGDPYSFAASMGLLLLDAVLYGLATWYIEGVFPGQYGIPKPWNFPFLKS
YWFGESSSSGHSLYHSSSHTAPQVLVEEPPADLQPGVSIRNLVKVYGSSGHAAVNGLSLD
FYEGQITSFLGHNGAGKTTTMSILTGLLPPTSGTAYILGWDIRSDIDSIRKSMGMCPQHN
VLFDILTVEEHVWFYGRLKGLSEQQVQEEMEQLLQDTGLPHKRREQTRNLSGACRARAGC
QGGAXXXXXXEPTAGVDPFSRRSIWELLLKYRKGRTIILSTHYMDEAELLGDRTAIISQG
RLCCCGSPLFLKARLGTGYHLTLVKRDRSGTGGSTGTVPGVTKKDGSDSEHSSDTGLGSE
RGSDASAVDVAQLSALIQKLVPGSRLVEDIGHEVLFVLPYSGARDGAFGELFRELDARLG
ELGVSSYGISDTTLEEIFLKVAEDTALDADTAGTMKGAAPGEMGDGDVADGELAKGARRG
RSWGEFGGYHLPARVTSLAAVFSLLAAHRGPCHIEDYSVSQTTLDQVFMHFAQEQSDGDA
GEVTASGQDVATSPGRRLSRFLEDDSYQESAVAQWGITALGLAPHADRPAGKYSGGNKRK
LSTAIALLGCPPVVFLDEPTTGMDPQARRFLWERILGVIRDGRSVVLTSHSMEECEALCT
RMAIMVNGRFRCLGSVQHLKNSPRALELPSLGDEDQDVARERARVGNIPPHGHLLLLKDL
TKVYRRRKAPAVDRLCVAIPPGECFGLLGVNGAGKTSTFKMLTGDTEVTLGEAWLKGHSV
LTDLQSVHQHMGYCPQFDAITDLLTGREHLEFYSRLRGIPEEETPRXSPPGWDVHLSQAL
LCPCRWSITPLMYPASFLFSIPSTAYVALTCINLFIGINGSVATFVLELFVDQNLNDINR
VLKKVFLIFPHFCLGRGLIDMVKNQAMADAFERFGDKRFVSPLSWELAGKNMFAMAIEGI
VFFLFTLLLQYHRFFLRLG
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgggcacccagctggggctgctgctctggaagaacttcacctaccgccggcgg
cagcggatccagctggctatcgagatcctgtggcccctcttcctcttccttatcttgatc
tcagtgcggcgatcccacccgcccttcaagcagcatgagtgccactttcccaacaaggcg
ctgccctctgcggggaccctgccctggctgcagggcatcatctgcaacatgaacaacccc
tgcttccgacaccccacggcgggagaggccccgggtgccatggagggctcctttctctcc
cagatggacttcccacggctcctggcggaacagctgagctcagagctgggcggaatcgcc
ggcaccgtggaagctttgggcagcttcctgcgggatgcagcatccctgatggaggaggtc
tccatgcccagcctggccgagctgcgtcaggagattgaggggctgagggcccccaacagc
agcacgggtgcattcagagccctgtcccgcatcgcctgtggccaccccgagggcgggggg
ctcaggatcccctccctcaactggtacgaggacaacgatgtcaaagccttcctggaccgt
aacacctcagagcacaaacccgtggcctcaggcagcaccagtcccttctgcagggagctg
ctgcacagcctggagtccagccccctgtcacagatcttctggagggggatcaagcccctc
tttgtggggaagatcctgtacaccccacctgggcctggccccgacagcgtcatggctgag
gtgaaccgaaccttccgggagctggcggtgctgggggagctggggggtgcctggcaggag
ctgggaccccgaatctacaccatcctcaacagcagcctggagatgcaggtgctccaggag
ctgctgctggcccccagcacagcccagatcctggatgggttcctcaacggcacctcctgg
aagctgccagagctggtcacgttcctgacggggccagcagggggaccaggcctcacctgg
caccaggtgtacgctgatgtggacgcagtgctgagcacgctgtcacagttcatggagtgt
gtctgcctggacaagatcgaggcagtggccaccgaggagcagctggtagcccgagccctg
gagctgctggaggagcagcagttttgggctgcagtggtcttccagccccccatcaatgcc
acagcccccgggctgccaccccacgtccgctacaagatccgcatggacatcgacgacgtc
acgaggaccaacaagatcaaggacaggttttgggacccaggccctgctgctgaccccttc
agtgacctgcgctacgtctgggggggcttcgtgtacatccaggacctggtggagcaggca
gtggtgagggtgcacactggggctgccccacggactggggtctacgtccagcagatgccc
tacccctgctacgtggatgatgtgttcctgagggtcctgaaccgctcgctgcctctcttc
atgactctggcctggatctactccgtggccatgatcatcaagggggtggtgcatgagaag
gagacgcgtctcaaggagaccatgaagaccatggggctgagcagcgggatcctctggctc
agctggttcctcagcagcttcatccccttcctcctcagctctgccctccttgtcctcatc
ctcaagctgggaaacatcctgccctacagcaacccagcagtcatcttcctcttcctcggc
accttctcagtggccaccatcagccagtgcttcctcatcagcaccttcttcccccgtgcc
aacctggcctcggcgtgcggtggcatcatttacttctctctgtacctgccctacgtgctg
tgcgtggcctggcgtgactacatcaccttcccgctccgtgtccttgtgagcctgctgtcc
cccgtggcctttggttttggctgtgattacttctccctctatgaggaacaaggggtgggc
atccagtggcacaacctggctgccagccccgtgccaggagacccgtacagctttgctgca
tccatggggctgctgctgctggatgctgtcctttatggattggccacctggtacatcgag
ggtgtcttcccaggtcagtatgggatccccaagccctggaatttccccttcctgaagagc
tactggtttggggagtcatcctcatctgggcactccctgtaccacagcagctcccacact
gcaccccaagtgctggtggaggagccacctgctgatctccagcctggcgtctccatccgc
aacctggtgaaggtctatggcagcagcggccatgcagccgtcaacgggctgagcctggac
ttctacgagggacagatcacatccttcctgggccacaacggcgctggaaagaccaccacc
atgtccatcctgactggcctcctgccccccacctcgggcactgcctacatcctgggctgg
gacatccgctccgacatcgacagcatccgcaaatccatggggatgtgtccccagcacaac
gtgctcttcgacatcctgacggtggaggagcacgtctggttctacgggcggctgaagggg
ctctcggagcagcaggtgcaggaggagatggagcagctgctccaggacacggggctgccc
cacaagcgccgggagcagaccaggaacctctctggtgcgtgcagagctcgggctgggtgc
cagggaggggcnnnnnnnnnnnnnnnnnnngagcccacggccggcgtggatcccttctcc
cgccgaagcatctgggagctgctgctcaagtaccgcaaaggtcgcaccatcatcctgtcc
acccactacatggacgaggcggagctgctgggggaccgcactgccatcatctcccagggc
cggctctgctgttgtggctcccccctcttcctcaaggccaggcttggcactgggtaccac
ctcaccctggtgaagagggacaggagcgggacaggcggcagcaccggcaccgtccccggt
gtcaccaaaaaggatggcagtgactcggagcacagcagtgacaccggcctgggcagcgag
cggggcagtgatgccagcgccgtggatgtggcccagctgtcggcgctgatccagaagctg
gtccctggctccaggctggtggaggacatcgggcacgaggtgctgtttgtcctgccctac
agcggggccagggatggggcctttggggagctgttccgcgagctggatgcgcgcctgggc
gagctgggggtctccagctacggcatctctgacaccaccctggaggagatattcctgaag
gtggctgaggacacagcactggacgctgacactgcaggcaccatgaaaggagcagcccct
ggcgagatgggagacggggatgtggctgatggagagctggccaaaggagccaggcgaggt
aggagctggggggagtttggggggtaccacctccctgcccgtgtcacctccctggccgct
gtcttcagccttctggccgcccaccgtggcccctgccacatagaggactactcagtgtcc
cagaccacgctggaccaggtcttcatgcactttgcccaggagcagagcgatggggacgcc
ggggaggtgacagcctcaggacaggatgtggccaccagtcctgggaggaggctgagcagg
ttcctggaggatgacagctaccaggaaagcgctgtggctcagtggggcatcaccgctctg
gggctggccccacacgccgaccggccggcgggcaaatacagcgggggcaacaaacgcaaa
ctctccacggccatcgccctcctcggctgtccccctgttgttttcctggatgagcccacg
acggggatggacccgcaagcccggaggttcctgtgggagcgaatccttggtgtgatccgg
gacggacggtccgtggtgctcacatcccacagcatggaggagtgcgaggcgctctgcacc
aggatggccatcatggtcaacggccgcttccgctgcctgggcagcgtccagcacctcaaa
aacagcccacgggctctggagctgccctcgctgggagatgaggaccaggatgtggccagg
gagcgggcgagggtgggcaacatccccccacacggccacctcctgcttctgaaggacctg
accaaggtgtaccggcgcaggaaggctccggccgtggaccggctttgcgtggccattccc
cccggggagtgctttggcctcctgggggtgaacggtgctgggaaaacatccaccttcaag
atgctgacaggggacacggaggtgacgctgggggaggcctggttgaaggggcacagcgtg
ctcaccgacctccagtctgtccaccagcacatgggttactgtccccagtttgatgccatc
acggacctgctgacggggcgggagcacctggagttctacagccgcctgcgtggcatccca
gaggaagagacccccaggatnagccccccaggctgggatgtgcacctcagccaggccctg
ctgtgcccctgcagatggtccatcacccccctgatgtatccagcctccttcctcttcagc
atccccagcactgcctacgtggccctgacctgcatcaacctcttcattggcatcaacggc
agcgtggccacctttgtgctggagctctttgtggaccagaacctcaacgacatcaaccgt
gtcctgaagaaggttttcctcatcttcccccacttctgcttgggccgaggcctcattgac
atggtgaagaaccaggcaatggctgatgcctttgagaggtttggggacaagcgcttcgtg
tcccccctctcctgggagctggcagggaagaacatgtttgccatggccatcgagggcatt
gtcttcttcctcttcaccctcctgctgcagtaccaccgcttcttcctgcgcctggggtga
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integrated database retrieval system
