Zonotrichia albicollis (white-throated sparrow): 102065424
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Entry
102065424 CDS
T07911
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zab03036
]
102065424 (CHD5)
Chromosome and associated proteins [BR:
zab03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102065424 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
102065424
NCBI-ProteinID:
XP_014126537
Ensembl:
ENSZALG00000000461
LinkDB
All DBs
Position
Unknown
AA seq
1956 aa
AA seq
DB search
MRGPPAARDLLDDADNEEDVSEEDDGVLEGLDEFFAEDQVVVQKKKKSKKLKDGKAAKIK
RRKKEGSNDEMSENEEEMEEKSESEGSDYSPNKKKKKKLKDKKEKKPKRKKKEEEEDDND
DGSLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKM
MTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTTSPGLPASPQPSALPTVIRKAKT
KEGKGPGVRKKIKGSKDGKKKGKGKKTAGLKFRFGGISSKRKKGSSSEEEEREESDFDSA
SINSSSVRSECSAGLGKRGKKRKKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRA
YHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEDGGEEEEEDDHMEFCRVCKD
GGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWREPPAPP
PPAAAPQQPALPPPKALEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKN
DMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDKKG
DIHYLIKWKDLPYDQCTWEIDDIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKL
KEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADE
MGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKES
RSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVV
DEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLE
EFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR
NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKL
MLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF
NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY
RFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVE
GMVSQGQRIAMPDAVTPFSDTLSTKGGAAAPGMKKKHGSTPPGDNKDVDDSSVIHYDDAA
ISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWE
KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSIGSEDEDE
DFEERPEGQSGRRQSRRQLKTDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGM
PPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVL
TRIGVMSLVRKKVQEFEHVNGKYSTPDLLLEGPESKRSSEVVSSDPNTPVPASPAHTHAG
PGALADKTEAQLVFHEEKELVEQKSRKVSDSQVPASGEVESEEPPESCDSKERPRKEKQE
DCEKAEPSSEPLVKGLFPPADEGIQEQEKPLEKAELSSSPGKGEDKEVKPEDGKEEEKEP
SDAQQNGDKEEEEEGKKDDRNINFRFMFNIADGGFTELHTLWQNEERAAMSSGKIYDIWH
RRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLE
QALVIEEQLRRAAYLNMTQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVL
HKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDPAAQGSFG
SAPIFNNSFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgccggccgcccgcgacctgctggacgacgcggacaacgaggaggacgtg
tcagaagaagatgatggggtgctggaaggattggatgagttttttgcagaagaccaagtt
gtggtgcagaaaaagaagaaatccaagaagctgaaagatggcaaggctgccaaaatcaag
aggaggaagaaggaggggagcaatgatgaaatgtcagaaaatgaagaggagatggaggag
aaatcggaaagcgaagggagcgactattctcccaacaaaaagaagaagaaaaaactgaaa
gacaagaaggagaaaaagccaaaacggaagaagaaggaggaagaggaggatgacaatgat
gatggaagtttaaaggagcccaagagctcagcccagctcatggaggaatggggtctcgat
gacgtagattacattttctcagaagaggattaccatactctgaccaattacaaggctttc
agccagttcctcaggcctctgattgccaagaagaaccccaagatccccatgtccaagatg
atgaccgtgctgggtgccaagtggcgagagttcagtgccaacaaccccttcaagggcagc
tcggcggcggcggccgcggccgctgtggctgcggctgtggagaccgtcaccacctccccg
gggctccccgccagcccccagccctctgccctgcccaccgtcatcaggaaggccaagacc
aaggagggaaagggtccaggtgtacgaaagaaaatcaagggctccaaagacgggaagaaa
aaggggaaagggaaaaagacggcaggcttgaaatttcggtttggaggaatctccagcaaa
aggaaaaagggctcctctagcgaagaggaggagcgagaggaatccgactttgacagtgcc
agcatcaacagcagctccgtgcgctccgagtgctcagctgggctggggaagagagggaag
aagaggaaaaagaaaaagaggattgaagagggggacggctacgagaccgaccaccaggac
tactgcgaggtgtgccagcagggcggggagatcatcctgtgtgacacctgtccccgcgcc
taccacctggtctgcctggaccccgagctggagaaggcccccgagggcaagtggagctgc
ccccactgtgagaaggagggcatccagtgggagccgaaggaggaggaggaggaggaagag
gatggtggcgaggaggaggaggaggatgaccacatggagttctgcagggtgtgtaaggac
ggaggggagctgctgtgctgtgacacctgcccatcctcctaccacctccactgcctgaac
ccgccactgccagagatcccgaatggggaatggctctgcccacgctgtacttgccctccc
ctgaagggcaaggtgcagcgcatcctgcactgggcgtggagggagccgcctgccccgccg
ccgcccgccgccgccccgcagcagccagcgctgccgccgcccaaggcgctggaggggatc
ccggagagagagttctttgtgaaatgggccggcctgtcctactggcactgctcctgggtc
aaggagctgcagctggagctgtaccacaccgtgatgtaccgcaactaccagcgcaagaac
gacatggacgagccaccggccttcgactacggctctggggacgaggacagccagagggag
aagaggaagaacaaggacccccagtatgccaagatggaggagcggttctaccgctacggc
atcaaacccgagtggatgatgatccaccgcatcctgaaccacagctttgataagaaggga
gacatccattacctgatcaagtggaaggacctgccctatgaccagtgcacctgggagatc
gatgacatagacatcccctactatgagaacctcaaactcctctactggaaccacagggag
ctgatgctgggggaggacacgcgccctctgaagaagctgaacaagaaagggaaaaagctg
aaagaggagaagctggaaaagcctccagaaacacctcttgtggatcctacagtgaagttt
gacaagcagccgtggtacatcgatgccacgggaggcacgctgcacccttaccagctggaa
gggctcaactggctgagattctcctgggcacaagggacagatacaatcctggctgatgag
atggggctggggaagacagtgcagaccattgtgttcttgtattccctgtacaaggagggc
cactccaaggggccgtacctggtcagtgcccccctgtccaccatcatcaactgggagcgg
gagtttgagatgtgggcgcctgacttctacgtggtgacctacacgggggacaaggagagc
cgctcggtcatccgggaaaatgagttttcttttgaggacaacgccatccgcagcgggaag
aaggtcttcaggatgaagaaggaagcccagatcaagttccacgtcctgctcacgtcctat
gagctgatcaccattgaccaggcagtgctgggctcaatagagtgggcctgtctggtggtg
gatgaagcacacaggctgaagaacaaccagtccaaattctttagagtgctgaatagctac
aagattgattacaagctgctcctcacagggactccgctccagaacaacttggaggagctc
ttccacctgctcaatttcctgactccagagaggtttaacaacctggaggggttcctggag
gagtttgcagacatctccaaggaggaccagatcaagaagctccacgacctgctgggtccc
cacatgctgcggcggctcaaggccgatgtgttcaagaacatgccggccaagacggagctg
atcgtgcgtgtggagctgagccagatgcagaagaaatactacaaattcatactgacaagg
aactttgaagccctgaattcgaaaggtggtgggaaccaggtctcactgctcaacatcatg
atggacctgaagaagtgctgcaatcacccatacctgttccctgtggcagctgtggaggcc
cctgtgctgcccaatggatcttatgatgggaattctttggtcaaatcttctgggaaactg
atgctgctccaaaagatgctgaagaagttgcgggatggcggtcacagagttctgatcttc
tcgcagatgacaaagatgctggatttgctggaggatttcctggagtatgaaggctacaag
tacgagcgcattgacgggggcatcaccggcgggctgcgccaggaggccatcgacaggttc
aatgctcctggggctcagcagttctgcttcctcctctccacccgcgccggtggtctgggc
ataaaccttgctacggccgacactgtcattatttatgattctgactggaatccccacaat
gacatccaggcgttcagcagagctcaccgcatcgggcagaacaagaaggtgatgatttac
cgcttcgtgaccagggcctctgtggaggagcgcatcacccaggtggccaagaggaagatg
atgctcacacacctggtggtgcgcccagggctcggctccaagtcaggctccatgaccaaa
caagagctggatgacatcctcaagttcgggacagaagaactcttcaaggatgatgtggaa
ggcatggtgtctcagggacagaggattgcaatgcctgatgctgttacccctttctcagac
acactgtcaacaaaagggggtgcagcagcccctggcatgaaaaaaaagcatggtagcacc
ccaccaggtgacaataaggatgtagatgacagcagtgtgatccactatgatgacgctgcc
atctcgaagcttctggaccgaaaccaggatgcgacggacgacacggagctgcagaacatg
aatgagtatctcagctcctttaaagtggcccagtatgttgtgagagaagaggatggtgtg
gaggaggtggaacgggagatcatcaagcaggaggagaatgtggaccctgactactgggag
aagctgctgcggcaccactatgagcagcagcaggaggatctggccaggaacctgggcaag
gggaagagaatccgcaagcaagtcaactacaatgacacctctcaggaggaccaagagtgg
caggacgagctctctgacaaccagtcagagtattccattggctctgaggatgaggatgaa
gactttgaagagaggccagaaggccagagtggcagaagacaatcacggagacagctgaag
actgacagagacaaacctctccctcctttgctggcaagagtggggggaaacatcgaggtt
ctgggtttcaacgcccggcaacgcaaggcgttcctgaacgccatcatgcgctggggaatg
ccgccccaggatgccttcaactcccactggctggtccgggatctgcgggggaagagtgag
aaggagttcagggcatatgtgtccctgtttatgagacacttgtgtgagcctggggccgat
ggtgctgagacctttgcggacggcgttccccgggaaggactgtctcgccagcacgtgctc
acccgcatcggggtcatgtcactagtaaggaagaaggtccaggagttcgagcatgtcaat
gggaagtacagcaccccagacctgcttctggagggcccagagagcaagagatccagcgag
gtcgtgtcttcagatcccaacacacctgtcccagccagcccagcacacacacacgcgggg
ccaggggcccttgcagacaaaacagaagcacagctggtgttccatgaggaaaaggagctg
gtggaacagaagagcagaaaggtgtctgacagccaggtacctgcaagtggtgaggtggag
agtgaagagcccccagaaagctgtgacagcaaggagaggccaaggaaagagaagcaagag
gattgtgaaaaggctgagccttcctctgagcccctggtgaaaggcctgttccctcctgca
gacgaggggattcaagagcaggagaagcctttggagaaggcagagctgagcagcagccca
gggaagggggaggataaagaagtcaaaccagaggatggcaaggaggaggagaaggaacca
agtgatgcccagcaaaatggtgacaaagaggaagaggaggaagggaagaaggatgacaga
aacattaacttcagattcatgttcaacattgctgacggtggcttcacagagctgcacacg
ctgtggcagaatgaggagagggctgccatgtcctctggcaagatctacgacatctggcac
cgccgacacgactactggctgctggcaggaattgtcacccatggctatgcccgctggcag
gacatccagaacgacccacggtacgtgatcctgaacgagcccttcaagtcagagatacac
aaggggaactaccttgagatgaagaacaagttccttgcccggcgttttaagttgctggag
caggccctggtgatcgaggagcagctgcggagggcggcgtacctcaacatgacccaagac
cccagtcacccggccatggctctgaacgcacggctggcagaagtggagtgccttgctgag
agccaccagcacctctccaaagagtccctggctgggaacaagcctgccaacgctgtcctg
cacaaggtgctgaaccagcttgaggagctgctgagtgacatgaaggctgatgtgacacgc
ctgccctccatgctgtcccgcatcccgcccgtggctgcccggctgcagatgtcagagcgg
agcatcctcagccgcctggccacccgaggaggggacccagctgcccagggctcctttggc
tctgccccgatcttcaacaacagctttgggccaaatttccgtggtcctgggccaggtggg
attgtcaactacagccagatgcctctgggaccctatgtgactgatatttag
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integrated database retrieval system
