Zonotrichia albicollis (white-throated sparrow): 102065879
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Entry
102065879 CDS
T07911
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zab03016
]
102065879 (CDKAL1)
Enzymes [BR:
zab01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
102065879 (CDKAL1)
Transfer RNA biogenesis [BR:
zab03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
102065879 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
102065879
NCBI-ProteinID:
XP_005481831
Ensembl:
ENSZALG00000003423
UniProt:
A0A8D2M741
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MPAACEPVLEDIEDIVSAEDLKPHDRQFARRNVFPKVRKRNSQKNAQTDDEPASDSIIPG
VQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDNSDEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQEYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVELYRFPSLFINQFYPRPGTPAAKMPQVPAAVKKQRTKDLSQ
LFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLLMGKMVEVNIYEA
GKHFMKGQPVSDARVHTASISRPLAKGEVSGLTEEFRRSAQNGTKWKAQPNAEIPVKTQL
SSWMALQLPWQQEGGGLKILSVSLALLAVLVMFYYGGMKTEL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgagccagtgcttgaggatattgaagacatcgtgtcagcagaggat
ttgaagccgcacgatcggcagtttgcgagaaggaatgtttttcccaaagtgcgaaagcgc
aactcccagaagaacgctcagacagatgatgagcccgccagtgacagcattattcctggt
gttcagaaaatctggattcgtacatggggatgttctcacaataattcggatggtgaatac
atggctggacagctggctgcatatggatacaaaattacagataactctgatgaagcagat
ttatggttgctcaacagttgtactgtaaaaaatcctgctgaagaccactttagaaactca
atcaagaaagcccaagaagggaagaagaaagttgtgctagcaggctgtgtaccacaagct
caacctcgccaggagtacctgaaaggcttaagtattataggggttcagcagatagatcgt
gtagtagaagttgtggaggaaactattaaaggtcattctgtgagactgctgggtcagaaa
aaggataatggaaaacgtttggggggagcacgactggatttgccaaagattaggaagaat
ccactgatagaaataatttccatcaatacagggtgtctcaatgcatgtacctactgtaaa
actaaacacgccagaggagatctagcaagttatcctattgaagaactggtggacagagcc
aagcagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggcagagacattggcacagacctccccacgcttctgtggaagctggttgaagttatt
cctgagggagctatgctgaggcttggcatgacaaaccctccctatattttagagcacctg
gaggaaatggccaagattctcaatcatccaagagtgtatgcttttctacacataccagtc
cagtcagcctctgacagtgtgctcatggacatgaaaagagaatactgtgtggcagacttc
aaacaagtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacatc
atctgtggatttccaggagagaccgatgaagattttcaagaaactatgaaacttgtagaa
ctgtacaggtttccaagcttgtttattaatcaattctacccacgtccaggaaccccagct
gcaaaaatgcctcaagttccagctgcagtgaaaaaacagagaacgaaggatctgtcccag
ctgtttcattcatacaacccatatgatcataaggttggtgagaggcagagagttctggta
acagaagaatcctttgactccaattactacgttgctcacaatcctttctatgagcaggtt
cttgtgccaaaggatcctctgttaatgggtaagatggtagaagtgaatatttatgaagct
gggaaacattttatgaaggggcagccagtatcagatgccagagttcatactgcatccatc
agcagaccgttagcaaaaggagaagtttctggtttaacagaggagttccgacgttcagcg
cagaatggcacaaagtggaaagcacagcctaatgctgagatcccagtgaaaacacagctc
agctcctggatggctttgcagctgccatggcaacaagagggaggtggactgaagatcctg
tctgtcagcctggctctactggcagttcttgttatgttttactacggaggaatgaaaaca
gaactgtga
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