KEGG   Zonotrichia albicollis (white-throated sparrow): 102066197
Entry
102066197         CDS       T07911                                 
Symbol
HELQ
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
zab  Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:zab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zab03400]
    102066197 (HELQ)
Enzymes [BR:zab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     102066197 (HELQ)
DNA repair and recombination proteins [BR:zab03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    102066197 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF4332 DNA_pol_lambd_f DUF3135 DGKD_4H Cdd1
Other DBs
NCBI-GeneID: 102066197
NCBI-ProteinID: XP_014121337
Ensembl: ENSZALG00000015894
UniProt: A0A8D2NB54
LinkDB
Position
Unknown
AA seq 1054 aa
MAEPRLAVRRKSRSSSERKRSRAPVQPVAASSPVARKRPSSVSEGSPAEALCSNDSEEDM
FGDYDSFYGNDSLIAQVDDVEYKYLQDENMDVKAAGEVVLGNLQSGVHQKEQDNFSASQN
VVVLKSDKEAACQMQDSDPADSNQKLTESILYDLPSSQLLYFEKIDELAAASRISPLSKG
RDERVDSFSDKIRDPLSFYAAAEHRNRSIDSSSHSKCVLFKSESLKDHLKSAMTGNARAQ
TLQVSKTKQLKEAVLSEEIFVARKAIESSSLDIGPFYGLPSKVKDLFRQLRGIETLYEWQ
HDCLMLESLQQRKNLIYSLPTGGGKTLVAEIIILQELLCRQKDVLMILPYVAIVQEKVRG
LSSFGIELGFLVEEYAGSKGRFPPIKRRVKKSLYIATIEKGHALVNSLIETERIDDLGLV
VVDELHMLGAGSRGAVLEITLAKILYTSKKTQIIGMSATLNNVGDLQKFLQAEYYTNNFR
PVELKEYIKIRDTIYAVDSKTENGFAFSHLLNFKYSSNLEKADPDHIIALVTEVIPKYSC
LIFCPTKKNCENVASMVCKYLKKEFRAHKEKEKQDLIKNLKSIGNGAVCPVLKQTIPFGI
AYHHSGLTNDERKSIEEAYSAGVLCLLACTATLAAGVNLPARRVILRAPYVGNDFLKKNQ
YKQMIGRAGRAGIDSAGESILIVQEKDKHLVQDLVHSPLENCYSNLLLELTKGIQSLLLS
LVGLKIAVTREEVDNFMCCTLLGVQQQLLSKEKSLSEIIQDGLENLIEKGLLKGRISEKD
HNSKSTLTITPLGKAAYKGSIDLAYCNILYQDLKKGLQGLVLESNLHLLYLSTPYDMTST
CSPDWMIYLRQFNQLSAAEQKVADIVGVPESFITKKASGQAVRKNVDNAVVNRFYLTFVL
YSLLKETNVWSVSEKFNLSRGYVQNLLSSAASFASCLLHFCEELEEFWVYKALLTELTKQ
LTYCVKTELIPLMEVAGVLEARAKQLYNAGYKTLAHLANANPETLVRMIEHLSRRQAKQI
ISSAKMLLSEKAEALQEEVEELLKVPTDIPGTTD
NT seq 3165 nt   +upstreamnt  +downstreamnt
atggcggagcctcggctcgccgtgcgtaggaagagccgctccagctcggagcgcaagcgg
agccgggccccggtgcagcctgttgccgctagttcgccggtggctcgcaagagaccgagc
tctgtcagcgagggatccccggcggaggcgctgtgcagcaatgacagcgaggaggatatg
tttggtgactatgacagcttctatggaaacgattccttgatcgctcaggtggatgatgtt
gaatacaagtacctgcaggatgaaaatatggatgtgaaagcagctggagaggttgtactt
gggaaccttcagtcaggagttcaccagaaagagcaggataacttctctgcttcacaaaat
gtggttgtgcttaaaagtgacaaagaggctgcctgccaaatgcaggacagtgacccagct
gatagcaatcaaaaattaactgagtccattttatatgacttgccatcttcacaactcctg
tattttgaaaaaattgatgaacttgctgctgcttctagaatatctccactctcaaaaggg
agagatgaacgtgtggattctttctcggacaaaatcagagacccattgtctttttatgct
gctgctgaacacaggaacagatctatcgattcttcctcacactccaagtgtgttttattt
aaatctgagagtctcaaagatcacctgaaaagtgctatgacgggaaatgccagagcccag
actctgcaggtctccaagaccaagcagctcaaagaagctgttttatctgaagagattttt
gtggctaggaaagctattgaatcttcttctcttgatataggccctttttatggattacct
agcaaggttaaagatttattcagacaacttcgagggattgaaacactttatgagtggcag
catgattgcctaatgttagaatccctacagcaaaggaagaacttgatatactcattgcca
actggtggtggaaaaactcttgtagctgaaataataattctccaggaattgctctgcagg
cagaaggatgttctgatgatcctgccatatgttgccattgtccaagaaaaggttaggggt
ttatcgagttttgggatagaattgggtttcctggttgaagaatatgcaggaagtaaagga
aggtttcctccaatcaaaaggagagtaaagaaatctctttatattgctactatagagaaa
ggacatgctctggtgaactcattaattgaaacagaaagaatcgatgacctcggcctggtt
gtggtggatgagctgcatatgctcggggcgggaagtcgaggagcagtactggaaattact
ctggcgaaaattctttacaccagtaaaaagacacagatcattggcatgagtgcaacgtta
aataatgttggagacctgcagaagttcctgcaagcagagtactacacgaataattttaga
ccggtagaattaaaggagtacataaagatacgagacaccatttatgcagttgacagcaaa
acagaaaatggctttgctttttcacatctccttaatttcaagtattctagtaatctggag
aaagcagatcctgaccacatcattgcacttgttactgaagttattcctaaatattcctgt
ctaatcttttgtcccactaaaaagaattgtgaaaatgtggcttcaatggtgtgcaagtac
ctcaagaaagaatttagagctcacaaggagaaagaaaaacaagatctcatcaagaaccta
aagagtattggaaatggagctgtctgtcctgttttgaagcaaacaatcccttttggtatt
gcctatcaccatagtggccttacaaatgatgaaagaaaaagcatagaggaagcttattct
gcaggtgtcctgtgtctgcttgcttgcacagccactctagctgctggagtgaacctacca
gctaggagggtgattctcagagctccttatgttggcaatgacttcctgaagaagaaccag
tataagcaaatgattggcagagctggtcgagctggtattgacagtgctggagaaagtatt
ctcatagtgcaagaaaaagacaaacacttggttcaggatttagttcacagtcctttggag
aactgctacagcaatcttctgctggagctgaccaagggaatccagagcctattgttgtct
ttggttggactgaagatagcagttacccgtgaggaagtggacaattttatgtgctgtacg
ttgctgggtgttcagcagcagctgctgtctaaagagaagagcctctcagagataattcaa
gatgggctggaaaatctaatagaaaaaggactcctaaaaggaagaatatctgagaaagac
cacaattccaaatctacactgacaatcacacccttgggtaaagctgcatataagggctca
atagacttggcatactgcaatattctgtaccaagacttgaaaaagggtttgcaggggctg
gttctcgagagcaatcttcatctcctgtatctgtcaactccctatgatatgacttctact
tgtagcccagattggatgatatacttgagacagtttaaccagctaagtgcagcagagcaa
aaagtagcagatattgtgggagtacctgaaagctttattacaaaaaaggcttctggtcaa
gccgtcagaaagaatgtggacaatgctgtggtgaacaggttctaccttacatttgtcctt
tattcactactgaaagagaccaatgtatggagtgtttcagagaaatttaacttgtcccgg
ggatatgtgcaaaatctcctcagttctgcagcctcctttgcatcctgccttctacatttc
tgtgaggaattggaagaattctgggtttataaagccctgctgacagagcttaccaagcag
ttgacatactgtgttaagacagaactcatccctctgatggaggtagcaggggttctagag
gcacgagcaaaacagctttacaatgcaggatacaaaactttagcacacttggctaatgca
aatccagagactttggtgaggatgattgagcacttgtcacgacgtcaagccaaacaaata
atttcatctgcaaagatgctgttgagtgaaaaagctgaggctttacaggaagaagtcgaa
gaactcttaaaagtgccaacagatatcccagggaccactgattga

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