KEGG   Zonotrichia albicollis (white-throated sparrow): 102066227
Entry
102066227         CDS       T07911                                 
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
zab  Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03015  mRNA surveillance pathway
zab05164  Influenza A
Brite
KEGG Orthology (KO) [BR:zab00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102066227 (CPSF4L)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    102066227 (CPSF4L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zab03021]
    102066227 (CPSF4L)
   03019 Messenger RNA biogenesis [BR:zab03019]
    102066227 (CPSF4L)
Transcription machinery [BR:zab03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     102066227 (CPSF4L)
Messenger RNA biogenesis [BR:zab03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     102066227 (CPSF4L)
SSDB
Motif
Pfam: zf-CCCH zf-CCCH_2 Torus zf_CCCH_4 zf-CCCH_3 Nab2-like_zf-CCCH_ zf-CCCH_12 zf-CCCH_DUS3L
Other DBs
NCBI-GeneID: 102066227
NCBI-ProteinID: XP_005496788
LinkDB
Position
Unknown
AA seq 177 aa
FLHGYDASRVPECYFYSRFGECSNKDCPFLHAGATASTGRCPWYDRGFCWHGPLCKYKHM
RRVMCANYLVGFCPEGPKCKFVHLKAGLMPSSTDPSKGAGCPWGLVQRDLAAAEDGGGEH
VPAKEPPACGTQQLWDTRGCPPSPQSLLQGGTCSKRGSARPCASQSRRTQLEMLLGK
NT seq 534 nt   +upstreamnt  +downstreamnt
ttcctgcacggctacgatgccagccgggtgcccgagtgctatttctactccaggttcggg
gagtgcagcaacaaggactgtcccttcctgcacgccggtgccaccgccagcaccgggcgc
tgtccctggtacgaccgaggcttctgctggcacggtcccctgtgcaagtacaagcacatg
aggagggtgatgtgtgccaactacctggtgggcttctgccccgagggacccaagtgcaaa
ttcgtgcacctcaaggccgggctgatgccgagcagcacagacccatccaagggagctgga
tgcccatgggggctggtacagagggacctggctgctgcagaggacgggggaggtgagcac
gtgccagccaaggagccacctgcatgtggcacccagcagctgtgggacaccaggggctgc
cccccgagcccccagagcctgctgcagggaggcacctgctccaagagaggatcagccaga
ccctgtgccagccagagcaggaggactcagctggaaatgctgctgggaaagtga

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