Zonotrichia albicollis (white-throated sparrow): 102066270
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Entry
102066270 CDS
T07911
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03440
Homologous recombination
zab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102066270 (BRIP1)
03460 Fanconi anemia pathway
102066270 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zab03400
]
102066270 (BRIP1)
Enzymes [BR:
zab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102066270 (BRIP1)
DNA repair and recombination proteins [BR:
zab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102066270 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
102066270 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
HBB
ResIII
ARCH_RTEL1
Motif
Other DBs
NCBI-GeneID:
102066270
NCBI-ProteinID:
XP_014128607
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MPSEGAQYTIGGVKILFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSA
LSWQQALYEKSVPSSSCDKEDRKAAPSPPCHCRCHSQARSSEAAASGTPSAPCSASYPEP
GTSRRPGSPLPSTECKESETLASKLSAKKKLSLHASENDDFQVDRKRIRPLETEQQVRKR
HCLAKGVQLVDALEVYHQRKNGELIVHSEKSMKTTTCSPQTPPGPCTECSCASGKEPGKD
PSHTKKKENGDRLCVPKIFFGTRTHKQISQISRELKRTAYSCVPMTILSSRDYTCIHPVV
SNSGNRSEMCVELLEGKHGKSCSFYHGVHKLSEQPALQPGHGLYQAWDIEDLVRLGRKLR
ACPYFAARELMVGADIVFCPYNYLLDPQIRDSMDINLKDQVVILDEAHNIEDCARESVSY
GVSERQLRAAREELDFMVSNSIRQKHHEPLRAVCCSLINWLQESSGQLVERAFESACKVW
SGKEMLNFLHQMGITGITFPILQKHLAAVLEKEEKVSMHGREEIIEVPVVSPAAQIVLKG
LFMVLSCLFKENSRFADDYRVALQQTYTWMTEDQRDDADKSSFFPRPKHKKSSRQKTLVH
MLNFWCLNPAVAFSDLNEVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVWV
GTVGTGPSGRQLCATFQHTETFEFQDEVGALLLSVCQTLGQGILCFLPSYKMLDKLKERW
MHTGLWRNLEDVKTVIAEPQGGAKSDFDELLKIYYDAIKCKGEKDGALLIAVCRGKVSEG
LDFCDENARAVVTIGIPFPNVRDLQVELKRKYNDQHKSTRGLLSGSQWYEIQAYRALNQA
LGRCIRHRNDWGALILVDDRFRRNPNKYITGLSKWIRQQVQHHGSFGSALRSLRAFALRN
QSRGEPWAEAQPGPEPPAQPCRPCPGSPQHS
NT seq
2795 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgagggggcacagtacaccatagggggggtgaagatcctgttcccctgcaag
gcttacccctcccagctggccatgatgaacgctattgtgaaaggcttgaataacaggcag
cactgtttgctggagagccccacaggaagtggcaaaagcttggcattactttgttctgca
ctatcatggcagcaggctttgtatgagaagtcagtgccaagctcgtcgtgtgacaaggag
gacaggaaggcagcgccatccccgccctgtcactgcaggtgtcactcccaggccaggagc
agcgaggctgcagcgagtgggactcccagtgctccttgttctgccagttatcctgagcca
ggaacttccaggagacctggcagccctctgccaagcacagaatgtaaggaaagtgaaaca
ctagcttcaaagctgtctgccaaaaagaagttatcccttcatgccagtgagaatgatgat
ttccaggtggacaggaagaggattcgtcctttagagacagagcagcaggtgagaaaacgt
cactgccttgccaaaggagtgcagctggttgatgctctggaggtttatcatcagaggaaa
aatggagagctgattgttcactctgaaaaaagcatgaaaaccactacttgttctccccaa
acacctcctggcccttgcactgagtgttcctgtgcttctgggaaggagccaggtaaagat
cccagtcacacaaagaagaaagagaacggagatcggttgtgtgttcccaaaatttttttt
gggacacgaacacacaagcaaatcagccagatcagcagggagctgaagaggacagcgtat
tcctgtgtgcccatgacaatcctgtccagcagggattacacctgcattcatcctgtggtg
tccaacagtggcaacaggagtgagatgtgtgtagagttgctggaaggaaaacatggcaag
tcctgctctttttaccacggtgttcacaagctgagtgagcagcctgccctgcagcctggc
catgggctgtaccaggcctgggacattgaggacctggtgaggctgggcaggaaacttcgt
gcctgcccctactttgcagccagggagctgatggtgggggcagacatcgtcttctgtccc
tacaactatctgctggacccacagatccgggacagcatggacattaacctgaaggaccaa
gtagtcattttggatgaagcccacaacattgaggactgtgctcgggagtccgtgagctac
ggggtcagcgagaggcagctgcgcgctgcccgcgaggagctcgacttcatggtcagcaac
agcatcaggcagaagcaccacgagcccctccgagctgtctgctgctccctgatcaactgg
ctgcaggagagctctgggcagctggtggagagagcctttgaaagtgcctgcaaggtgtgg
agtggcaaagaaatgctcaactttctgcaccaaatgggaataactggcatcactttcccc
attttacagaaacatcttgctgctgtcctggaaaaagaagaaaaagtttctatgcatggg
agagaggaaattattgaggtgccagttgtgagccctgcagcacagatcgtgctcaaaggc
ctgttcatggtcctttcctgtctcttcaaagagaacagcaggtttgcagatgattacagg
gttgctctacaacaaacttacacctggatgactgaagaccaacgtgatgatgcagataaa
agttccttcttcccaaggcccaagcacaaaaagagttcaaggcagaaaacccttgtccac
atgctgaacttctggtgcttgaaccctgctgtggctttttctgacttaaatgaagtcaga
acaattgttctgacctcaggcactctctctcccatggattccttttcctcagagcttggt
gtgaagttttccattcagctggaggccaatcacgttatcaggaattcccaggtgtgggtt
ggcacagtgggcaccggccccagcgggcggcagctctgtgccaccttccagcacaccgag
accttcgagttccaggacgaggtgggggccctgctgctgtcggtctgtcagacactcggc
caagggattttgtgctttttgccatcctacaagatgctggacaagttaaaggagcgttgg
atgcacacaggcctgtggaggaacctggaggacgttaaaactgtcattgctgagccccag
ggaggggccaagagtgactttgatgagctgctgaaaatctactacgatgcaatcaagtgc
aaaggagaaaaagatggggctctgctgattgctgtgtgcagagggaaggtcagtgagggg
ctggatttctgcgatgagaacgccagggccgtggtgaccatcggcatccccttccccaac
gtcagggacctgcaggttgaattaaagaggaagtacaatgaccagcacaaaagtacaaga
ggacttttatcagggagtcagtggtatgaaatccaagcttacagagctctcaaccaagcc
ctgggaaggtgtataaggcacaggaatgactggggggctcttattttggttgacgaccgc
ttcaggaggaaccccaataaatacataactgggctgtccaagtggatccggcagcaggtg
cagcaccacggctccttcggcagcgccctgcgctccctgcgcgccttcgccctgcgcaac
cagagccggggggagccctgggcagaggcacagcccggccccgagccccctgcccagccc
tgccgcccctgcccgggctccccacagcacagcag
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