Zonotrichia albicollis (white-throated sparrow): 102067395
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Entry
102067395 CDS
T07911
Symbol
WHRN
Name
(RefSeq) whirlin
KO
K21879
whirlin
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
zab03037
]
102067395 (WHRN)
Cilium and associated proteins [BR:
zab03037
]
Primary cilia and associated proteins
USH complex and associated proteins
102067395 (WHRN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
CCM2_C
USH1C_N
PDZ_4
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
102067395
NCBI-ProteinID:
XP_014128868
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MSAELDGVSVHSSSSSSGSLGSAPGPAPRPLSANVRRLHQALTTLLSEAERERFILCLNA
YHGRRNVCDLVRSLRALLDGPRRRQLLPLLRLVLPRSDQLLFDQYTAEGPYLPPPGRPPP
PPAPPPVLPGELRQVTLRRSKAHEGLGFSIRGGAEHGVGIYVSLVEPGSLAEREGLRVGD
QILGVNGKSLDRVTHAEAVKVLKGCKKLNLSVHSVGRIPGGYVTNHIYTWVDPQGRSVSP
PSGLPHHQHSSLRRDSEKRSHLQLLQEGDEKKVNLVLNEGKSLGLMIRGGAEYSLGIYIT
GVDKGSEAESTGLKVGDQILEVNGRSFLSIPHDEAVKLLKSSRHLMMTVKDIGRLPHART
TVDETRWISSSQLGETLLSSAGAVGDHAMDVAARPVFYRGLAGSQVTLSTMVNQSRVMLE
EQARHLLNEQERATMGYYLDEYKEGNISVDALVMALFELLNTHAKFSLLSEVRGVISPQD
LDRFDNLVLKREIESMKARQPAGPSPDSYSMMSYSDTVSSSSSHFTATTVSSARERLLWL
IDLMEVGLQGLGQGRGGSAHNCGKLKVGHVILEVNGTGLRGKEHREAARIIAEAFKLKDK
DYIDFLVTEFNVAL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggagctggacggcgtgtccgtgcactcctcctcctcctcgtcgggctcgctg
ggctcggcgccggggccggctccgcggccgctctcggcgaacgtgcggcggctgcaccag
gcgctcacaacgctgctgagcgaggcggagcgggagcgcttcatcctctgcctcaacgcc
taccacggccgccgcaacgtctgcgacctggtgcgctccctgcgcgccctcctcgacggg
ccccgccggcggcagctgctgccgctgcttcgcctcgtcctgccgcgctccgaccagctc
ctcttcgatcagtacacggccgaggggccgtacctgccgccgcccggccgccccccgccg
ccccccgccccgccgccggtgctcccgggcgagctgcggcaggtgacgctgcgccggagc
aaagcccacgagggtctgggcttcagcatccgcggcggcgccgagcacggcgtgggcatc
tatgtgtcgctggtggaacccggctctctggccgagcgggaggggctgcgagtcggcgat
cagatcctaggggtgaacggcaagtccctggacagggtgacccacgccgaggcggtcaag
gtgctgaagggctgcaagaagctgaacctgtcggtgcactcggtggggcgcatccccggg
ggctatgtcaccaaccacatctacacgtgggtggacccgcagggccgcagcgtgtccccc
ccctcggggctgccccaccaccagcacagctccctgcgcagggacagcgagaagaggagc
cacctgcagctgctgcaggagggggatgagaagaaggtgaacctggtcctgaacgaaggg
aaatccctgggcctcatgatccgaggaggggcagaatattccctgggcatctacatcacg
ggtgtggacaagggctccgaggcagagagcactggcttgaaggtgggagaccagatcctg
gaggtgaacggccggagcttcctgagcatcccccacgacgaggccgtgaagttgctcaag
tcctcgcggcacctgatgatgacggtgaaggacatcgggcgcctgccccacgcccgcacc
accgtggatgagacccgctggatcagcagctcccagctcggggagaccctgctcagctct
gcaggggccgtgggtgaccatgccatggatgtggcagccaggcccgtgttctaccggggg
ctggccggctcgcaggtgaccctgagcaccatggtgaaccagagccgcgtgatgctggag
gagcaggcccggcacctcctcaacgaacaggagagagccaccatgggctactacctggac
gagtacaaggagggcaacatctccgtggatgctctggtcatggccctcttcgagctgctc
aacacacacgccaagttctcgctgctctccgaggtgaggggggtgatctccccacaagac
ctggaccgctttgacaacctggtgctcaagagggagatcgagtccatgaaggcccggcag
cccgcggggcccagccccgactcctattccatgatgtcctacagcgacaccgtctcgtcc
tccagcagccacttcactgccaccaccgtcagctcagccagggagcggctcctgtggctc
atagacctgatggaggtagggctgcagggcctggggcaggggcggggtggctcggcacac
aactgcgggaagctgaaggtgggacacgtcatcctggaggtgaacggcacggggctgcgg
ggcaaggagcaccgcgaggccgcccgcatcatcgccgaggccttcaagctgaaggacaag
gactacatcgatttcttggtcacagagttcaacgtggccctttag
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