KEGG   Zonotrichia albicollis (white-throated sparrow): 102067454
Entry
102067454         CDS       T07911                                 
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
zab  Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03082  ATP-dependent chromatin remodeling
zab03083  Polycomb repressive complex
zab04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:zab00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102067454 (RBBP4)
   03083 Polycomb repressive complex
    102067454 (RBBP4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    102067454 (RBBP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zab03036]
    102067454 (RBBP4)
Chromosome and associated proteins [BR:zab03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     102067454 (RBBP4)
  Histone modification proteins
   HAT complexes
    HATB complex
     102067454 (RBBP4)
   HDAC complexes
    Sin3A-HDAC complex
     102067454 (RBBP4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     102067454 (RBBP4)
    PRC2.2
     102067454 (RBBP4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     102067454 (RBBP4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102067454 (RBBP4)
  Chromatin remodeling factors
   NuRD complex
    102067454 (RBBP4)
   NuRF complex
    102067454 (RBBP4)
   NuRF complex (fruit fly)
    102067454 (RBBP4)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_WDR90_POC16_2nd eIF2A WD_LRWD1 Beta-prop_RIG_1st WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_IFT140_1st MIOS_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 102067454
NCBI-ProteinID: XP_026653590
Ensembl: ENSZALG00000012221
LinkDB
Position
Unknown
AA seq 306 aa
MTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDA
SHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYT
KHPSKPDPSGECNPDLRLRGHQKEGYGLSVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD
PEGQGS
NT seq 921 nt   +upstreamnt  +downstreamnt
atgacccatgccctggagtggcccagcctgactgctcagtggcttcctgatgtcacaaga
cctgaaggcaaagatttcagcatccacaggttggtgctgggcacccacacctcagatgag
cagaaccacctggtgattgccagtgtgcagctgcccaacgacgatgcccagtttgatgct
tcccactatgacagtgagaaaggagagtttggaggctttggctcagtgagtggaaaaatt
gagattgagatcaagatcaaccacgagggagaggtgaacagagcccgttacatgccccag
aacccctgcatcattgccaccaagactccctccagcgatgtgctggtctttgattacacc
aaacacccctccaagccagatccttctggggagtgcaaccccgacctgcggctgcgcggg
caccagaaggaggggtacgggctctccgtggatgctcacacagctgaggtgaactgcctc
tccttcaacccctacagtgagttcatcctggccacaggatcagctgataagactgttgct
ctgtgggatttgaggaacctaaaactgaagctgcactcctttgaatcacataaagatgaa
atatttcaggttcagtggtctccccataatgaaaccatcctggcctccagtggcacagac
cgtaggctaaacgtgtgggacttgagtaaaattggagaggagcaatcccctgaggatgct
gaggatgggcccccagagctcttgtttatccatggtggtcacactgcaaagatctcggat
ttctcctggaatcccaacgagccctgggtcatttgttctgtatcagaagataatatcatg
caagtctggcagatggcagagaacatctacaacgatgaagatcccgaaggaagcgtggat
ccagaaggtcaaggatcctaa

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