Zonotrichia albicollis (white-throated sparrow): 102067524
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Entry
102067524 CDS
T07911
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zab03000
]
102067524 (SOX30)
Transcription factors [BR:
zab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102067524 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102067524
NCBI-ProteinID:
XP_005483771
Ensembl:
ENSZALG00000010516
UniProt:
A0A8D2MTG8
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MERRVRHCRFRARASPASPPRHREVMGPLGGLRVQVQEPPSRPGHSEGAAKKSRCIPAPA
AVEKEARGAIRRERDQERGSGDRQNEEKVLEQTGNKSWRRSAVQSERPNVTFETRPVKAE
KSDAPAGSLCELGNPAQDQNIPVLFQSLPPRSHVQLQGPLSAQLMHVTPVPVKQVPVQLQ
PLLQRPKIETKNVPLTVLPSDSGMPDTPFSKTKSGRVKRPMNAFMVWARIHRAAVAKANP
GANNAEISVQLGLEWSKLTEEQKQPYYEEANKIKLRHREEFPGWVYQPNKKKCSPPPGSA
AFSGTSQSTITTNPAGTLPFSSPTYSFVNSSVKNSIGRPVCESPAIRLPASSIQHAVPMT
LFQTTAASTTSVAVAVPTLPLRPVVSSQPFAEPAQTEAFVSPGLNFSLKRPAPVFAESFS
NRNPSNISSTSGRFSVSNSEMPGISVFPRGIALPQATPFIPSPAYVSAPIGQPASLFGGT
PQFPFCHPSFIPGPRCFPSSTFPLRAPFGYGSFSSSVPQCFGFYEERNQRQEVIFSTVDE
DYRFRAYSEERLCENQRVCGSPEVVSCQSTCSEERVLSPLPQLDVEVVEEVLPSPPSTPS
STYIVNVTDSDEEEEVKFFQVL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcagggtcaggcactgccgcttccgcgcccgggcgagccccgcctcgcccccc
aggcacagggaggtcatgggccccctcggagggctgcgcgtccaagtgcaggagcccccg
agccggcccgggcacagcgaaggagcggcgaagaagagcaggtgcatcccggctccggcg
gcggttgagaaagaggcccggggtgccatcaggagagaaagggaccaggaaaggggcagc
ggtgaccgccagaacgaggagaaggtcctggagcaaacggggaataagtcctggagaaga
tctgccgtccaaagcgagcgacccaacgtgaccttcgagacccgcccagtgaaggcggag
aagagcgatgccccggccggatccctgtgcgagcttgggaaccctgctcaagatcagaat
atcccggtcttgtttcagtccttgcctcccaggtcccacgttcagctccagggcccgctt
tccgcgcagctgatgcatgtgactccagtgccggtaaaacaagtgccagtccaattgcag
cctctgctgcagcggccaaagattgaaaccaaaaacgttcccctcacagtcctgccctcg
gattcaggaatgcctgacactcccttcagcaagaccaagagtggccgtgtgaagcgtccc
atgaacgccttcatggtgtgggcccggatccacagggctgctgtggccaaagccaaccca
ggggccaacaacgccgagatcagcgtccagctcggcctggagtggagcaaactcactgag
gagcagaagcagccctattatgaggaagctaacaaaataaaactgaggcacagggaggaa
tttcctggttgggtttatcagccaaacaaaaagaagtgttctccaccacctggctctgct
gcattttcaggcacttcccagagtaccatcactacaaatccagctggcacccttcccttc
tcatcacctacttactcttttgtcaactccagtgttaagaacagtattggacgtccagtc
tgtgaatctcccgccatccgtctgccggcctcttccatccagcacgctgtgcccatgacc
cttttccagaccacggctgcaagcaccacttcagtggctgttgcagttcccaccctgccc
ctgcgccctgtagtttcatcacagccctttgctgagcctgctcagacagaagcttttgtg
tcacctgggctcaatttctccctgaagagacctgcgcccgttttcgctgagagcttcagc
aacagaaacccgagtaacatcagcagcactagtggcaggttttctgtctccaacagtgag
atgccagggatttctgtatttcctagaggaatagctcttccccaggctacccctttcatt
ccctcacctgcctacgtgtctgctcccattggacaaccagccagtttgtttggaggaact
cctcagtttccattttgccacccttcctttatacctggacctcgctgtttcccctcaagc
acattcccactcagagctccgtttggctacgggagtttctccagctcggtgcctcagtgc
tttggcttttatgaggagaggaaccagaggcaggaggtgatattttccactgtggatgaa
gactatcgtttcagggcatactcagaggagaggctctgtgagaaccagcgtgtctgtggg
agccctgaggtcgtgtcctgtcagagcacctgcagtgaggagcgcgtcctgagccccctg
ccccagctggacgtggaagtggtggaggaggttttgccatcgcccccatctacgccctcc
agcacttacattgtcaacgttaccgatagtgatgaggaagaggaagtcaagttttttcaa
gtattgtaa
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