Zonotrichia albicollis (white-throated sparrow): 102067798
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Entry
102067798 CDS
T07911
Symbol
CDH23
Name
(RefSeq) cadherin-23
KO
K06813
cadherin 23
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
zab03037
]
102067798 (CDH23)
04515 Cell adhesion molecules [BR:
zab04515
]
102067798 (CDH23)
Cilium and associated proteins [BR:
zab03037
]
Primary cilia and associated proteins
USH complex and associated proteins
102067798 (CDH23)
Cell adhesion molecules [BR:
zab04515
]
Cadherins
Major cadherins
102067798 (CDH23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Fibulin_C
Cadherin_pro
Cadherin_4
PCDH15_12th
Motif
Other DBs
NCBI-GeneID:
102067798
NCBI-ProteinID:
XP_026651633
Ensembl:
ENSZALG00000000460
LinkDB
All DBs
Position
Unknown
AA seq
3060 aa
AA seq
DB search
MKRPVAAAAAHLLPALLLLELVSPGQGNRLPYFINYFFDTYLLINEDTPVGSSVAQLLAR
DLDNDPLVYGVVGEEASRFFAVESLTGVVWLRQPLDRETKSEFTVEFSVSDSQGVIKGTV
NIQVGDVNDNAPQFHNQPYSVRIPENTPVGTPIFIVNATDPDQGAGGSVLYSFQPPSDFF
AIDSGRGIVTVIRELDYEVTQAYQLQVNATDQDKHKPLSTLANLAVIITDVQDMDPIFIN
LPYSTNIYENSPPGTTVRMITAVDQDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGP
LDRENPFYTSGFILTVKGTELNDDRTPSNASVTTTFNILVIDVNDNAPEFNSSEYSVAIT
ELAQVGFALPLYIQVQDKDEGPNSVFEVYLVGNNSNHFIISPTSIQGKADIRVRVAVPLD
FETIPRYEFSLFANESVPDHVGFARVKINLINENDNRPIFSKALYNVSLLENTTVGTTVL
QVHATDNDVGSYGKVSYFFSDDPDRFSLDKDTGVIVLTARLDFESTQRYTLTVIARDGGG
EETTGRVRINVLDVNDNVPTFQKEAYLGALRENEPSVSQVVRLRASDEDSPPNNQISYSI
VHASAFREYFDITVSEGYGVISVNHPLDYEQLANGVIYLTVMAMDAGNPPLNSTVPVTIE
VFDENDNPPTFSKPSYVITVMEDIMAGATVLFLNATDMDRSREYGQESIIYSLEGSSHFR
INARSGEITTTSLLDREAKSEYILIVRAVDGGVGHHQKTGIAMVNITLLDINDNYPTWKD
EPYFINLVEMTPPNSDVTTVVAVDPDLGENGTVVYSIRPPNKFYTINSTTGKIRTSGVLL
DRENPNAQEAQLMRRIVVSVTDCGRPPLRATSSATVFVNLLDLNDNDPTFQNLPFVAEIA
EGLPAGTSVFQVVAIDLDEGPNGQVSYRMQVGMPRMDFIINSTSGLVTSTAVLDRERIPE
YLLRVVASDAGTPAKSSTSTLTVKVLDVNDENPTFFPAVYNVSLPEDVARDFKVVRLNCT
DADIGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVSLDRETVASYTLILEAIDNGPTGN
RRTGTATVYVTVLDVNDNRPIFLQSSYEVSVPEDIPAASSIVQVKATDADEGINGRVWYR
IVKGNEHNHFRINPSTGLVMRGVRHLDREQNSSHVLEVEAYNTEQGPMRSSVRVIVYVED
VNDEVPVFTQRQYSRLGLRETAGIGTSVAVVRATDRDTGPGGLVSYRIVSGAEGKFEIDE
STGLITTIDYLDYETKTSYLMNVSATDQAPPHNQGFCSVYVSLLNELDEAVQFSNSSYEA
VIMENIPLGSEVLRVQARSIDNLNQITYKFDPNTNPQALSLFKINGITGVITVKGQVDRE
KGDFYTLTVVADDGGPKIDSTVKVTITVLDENDNSPEFDITSDSSVSVAEDIAVGKRVAL
VLARDPDAGSNGQVTFSLASGNIGRAFEIRTTNGTYGEVFVARPLDRELLDHYTLRIQAS
DGGIPPRRKEHILRVNILDVNDNPPVIDSPFGYNVSVSENVGGGTAVVQVRATDRDIGLN
SVLSYYITRGNEDLTFRMDRITGEIATRPSPPDRERQSSYCLVVTVEDEGTPSLSATTTV
YVTILDENDNAPAFRQQLYEVTLDEGPSSLNASLVTVQALDQDEGPNGTVAYAITEGNIL
GTFHIDNATGEIRTVKELDYEISHGRYTLVVTATDQCPIVSRRLTSTATVLVNLNDINDN
CPTFPRPYEGPFDVTEGQPGPRVWTFLAHDGDSGPSGQVEYSIIAGDPLGEFVISPVEGE
LRVRKDAELDRENIPFYNLTIAARDRGVPPLSSTMVVGVRVLDINDNDPVLLNLPMNLTL
SESAAVSSFVTRVLAHDADQGPNALLTFDITAGNTENAFYINSTSGVVYVNRPLDRERVA
EYRLTVTVKDNPENIRNARRDFDLLVISIADENDNRPLFTQSSYQAEVMENSPPGAVKIK
TPLNRELVATYEVTISVHDNASEVIDRSVSVPNAKLTVNVLDVNDNTPRFRPFGVTYFTE
RILEGATQGTTLISISAVDPDKGANGQITYELLNLSPEGYACLEDPSAGKVVANRTVDYE
EVQWLNFTVRASDNGTPRRSAEIPVYLQIVDINDNNPVFSQPSYQKAVFEDVPLGTVILS
VTATDADSGQFALIQYSLSDGEGKFGINPNTGDIYILSALDREKKDHYTLTAVARDNPGD
VSSNRRENSVQVLITVLDINDVRPQFSKSQFSTSVYENEPAGTSVITMSATDLDEGDNGV
VTYSIEGPGAEAFNINKDSGLVTSRRRLKSYERFNLTVVATDKGHPPLWGTTMLHIEVID
INDNRPVFVRPPNGTILHIKEEIPLRSNVYEVYATDKDEGLNGVVLYSLLKTGAGNKDWE
YFTIDSVSGLIQTAMRLDREQQAVYNLIIVASDQGQPPYETMQPLQVELDDIDDNEPIFL
RPPRDSPQYQALSVPEHSPPGTVVGNVTGAVDADEGSNAIVYYFIAAGNEESNFQLSREG
KLKVLRDLDREKEPYHSIIVKASSQKNWAPPRGQQAARAQFWDLSEDLTLQEVRIFLDDI
NDQAPQFTKSEYTAGVATDAKVGSELIRVLAVDADVGNNSLVLYHILGIRYIKQHSNDSE
EVANIFSIGTLDGILRTFDLFTAYNPGYFVVDIMASDLVGHNDTAIVGIYILRDDQRVKI
IINEIPDRVRQFEEEFISLLSNITGAIVNTDDVQFHVDKKGRVNFAQTELLIHVVNRETN
RILDVERVIQMIDENKEQLRNLFRNYNVLDVQPAITARAPDDLSALQMAIIVLAVLLFLA
AMLFILMNWYYRTVHKRKLKAIVAGSTGNRGFMDIMDMPNTNKYSFDGANPVWLDPFCRN
MELAAQAEHEDDLPENLSEITDLWNSPARTHGTFGREPSAAKPEDDRYLRAAIQEYDNIA
KLGQIMREGPIKLIQKELEDEEEERSPSQGSLRFRHKQPVELKGPDGIHVVHGSTGTLLA
SDLNSLPEDDQKVLGRSLETLTADCGGYSDHNARTESAKSTPLHKMREVIMESPLEITEL
NT seq
9183 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgccccgtggctgctgctgctgcccacctcctgcctgccctgctgctcctggag
ctggtctctccaggtcagggcaatcgcctgccctacttcatcaactacttcttcgacacc
tacctgctgatcaacgaggacactcctgtgggttcctcagtggcccagctgctggccagg
gacctggacaatgaccccctggtctatggggtggttggggaggaggccagtcgcttcttc
gccgtggagagcctcaccggcgtggtgtggctcaggcagcccctggacagagagaccaag
tcagaattcacagttgaattttctgtcagtgacagccaaggggtgatcaaagggacagtg
aacatccaggtgggagacgtgaacgacaacgcgccgcagttccacaaccagccctacagc
gtccgcatcccagagaacacccccgtgggcacgccaattttcatcgtgaacgccacggac
ccggaccagggggctggaggcagcgtgctctactccttccagcccccttccgacttcttt
gccatcgacagcggccgtggcatcgtgacggtgatccgggagctggactacgaagtcact
caggcctaccagctccaggtgaacgccacggaccaagacaaacacaagcctctgtctact
ctggccaacctggcagtcatcatcacagacgtgcaggacatggaccccatcttcatcaac
ctgccctacagcaccaacatctacgagaactcacctccgggcaccaccgtgaggatgatc
acagccgtggaccaggacaagggacggccccggggcatcggctacaccatcgtgtctggt
aacaccaacagcatctttgcactggactacatcagtggagccttgaccctgaatgggccc
ctggacagggaaaatcccttctacacctctgggttcatcctcacagtgaagggcacagag
ctgaacgatgaccgcacgccctccaatgccagcgtcaccaccaccttcaacatcctggtc
atcgacgtcaacgacaacgcccccgagttcaacagctccgagtacagcgtggccatcaca
gagctggcccaggtgggcttcgccctgcccctctacatccaggtgcaggacaaggatgag
ggacccaacagcgtttttgaggtttacctggtgggcaacaactccaaccacttcatcatc
tcgcccacctccatccaggggaaggcggacatccgtgtgcgcgtggcggtgccgctggac
ttcgagaccattccccgctatgaattctcgctctttgccaacgagagcgtcccggaccac
gtcggctttgcgcgggtgaaaatcaacctgatcaacgagaacgacaaccggcccatattc
agcaaggccctctacaacgtcagcctcctggagaacaccaccgtgggcaccactgtcctc
caggtccacgcaactgacaacgatgtgggctcatatgggaaagtcagttatttcttcagc
gatgaccctgaccgcttctccctggacaaggacacgggtgtgatcgtgctgacggcccgg
ctggactttgagagcacgcagcgctacacgctgaccgtcatcgcgcgcgacggcggcggc
gaggagaccacgggccgcgtcaggatcaacgtcctggacgtcaacgacaacgtgcccacc
ttccagaaggaggcctacctgggcgccctgcgggagaacgagccctctgtcagccaggtg
gtccggctccgggcatctgatgaggactcccctccaaacaaccagatctcctacagcatc
gtgcatgcgtctgccttccgcgagtacttcgacatcacggtgtcagaagggtacggagtg
atcagcgtgaaccaccccctggactacgagcagctggccaacggggtcatctacctgaca
gtgatggccatggacgccggcaacccgccgctcaacagcaccgtgcccgtcaccatcgag
gtgtttgatgaaaacgacaatccccccacgttcagcaagccctcctacgtgataaccgtc
atggaggacattatggcaggagccacagtgctgtttctcaatgccacggacatggaccgg
tcccgggagtacgggcaggagtcaatcatctactccctggagggctcctcacatttccgc
atcaacgctcgctcaggagaaatcaccacaacctcgttgctggaccgggaggccaagtcc
gagtacatcctcattgtgcgggcagtggatggaggcgtggggcaccaccagaagacaggc
attgctatggtgaacatcacgctgctggacatcaatgacaactaccccacctggaaggac
gagccgtacttcatcaacctggtggaaatgacgccccccaactcggatgtcaccacggtg
gtggctgtggacccggacctgggggagaacggcacagtggtgtacagcatccggcctccc
aacaagttctacaccatcaacagcaccacgggcaagatccgcacctcgggagtgctgctg
gacagggagaaccccaatgcccaggaggcgcagctgatgcgcaggatcgtggtgtctgtc
accgactgtgggaggccacccctaagggccaccagcagtgccacagtttttgtcaacctg
ctggacctgaacgacaatgaccccactttccaaaacctgcccttcgttgctgagatcgcc
gaggggctccccgcaggcacctctgtctttcaggtggtggccatcgacctggacgagggc
cccaacgggcaggtgtcgtaccgcatgcaggtgggcatgccccgcatggatttcatcatc
aacagcaccagcgggctggtcacctccacggccgtgctggacagggagaggatccccgag
tacctgctcagggtggtggccagcgacgccggcacgcccgccaagagctccaccagcacc
ctcactgtcaaagttctggacgtgaatgatgagaaccccaccttcttccctgctgtctac
aacgtgtccctgcccgaggacgtggcccgcgatttcaaagtggtgcggctcaactgcacg
gacgccgacatcgggctcaacgccgagctcagctacttcatcacaggtgggaaccaggat
ggcaaattcagcgtcggcttcagggatggggtggtgaggacagtcgtgagtctggacagg
gagaccgtggcatcctacacactgatcctggaggccattgacaacggccccaccgggaac
cggcgcaccggcaccgccaccgtgtacgtgaccgtgctggatgtcaacgacaacaggccc
atcttcctgcagagcagctatgaagtcagcgtccccgaggacatcccagcggccagcagc
atcgtgcaggtgaaagccacggatgcggacgaaggcattaatgggagagtgtggtacagg
attgtcaagggaaacgagcacaaccacttccgcatcaaccccagcacggggctggtgatg
cggggagtgcggcacctggacagggagcagaactcctcccacgtgctggaggtggaggcc
tacaacacggagcaggggcccatgaggagctccgtgcgggtgatcgtctacgtggaggac
gtcaatgacgaggtgccagtgttcacgcagcgccagtacagccgcctggggctgcgggag
acggcggggatcggcacctccgtggcagtggtccgtgccaccgaccgggacacagggccc
gggggcctggtgagctacaggatcgtgtcgggtgcggaagggaagttcgagatcgacgag
agcacggggctcatcaccaccatcgactacctggactacgagaccaaaaccagctacctg
atgaacgtctctgccacggaccaggcgccgccccacaaccagggcttctgcagcgtgtac
gtcagcctgctgaacgagctggacgaggccgtgcagttctccaacagcagctacgaggcc
gtgatcatggagaacatcccgctgggctccgaggtgctccgcgtccaggcacgctccatt
gacaacctcaaccagatcacctataagttcgaccccaacaccaacccccaggcgctctcc
ctcttcaaaatcaacgggatcacgggagtgatcacggtcaaaggccaggtggaccgggag
aagggggatttctacaccttgacagtggtggctgatgatggaggaccaaagattgactcc
acagtgaaggtgaccatcacagtcctggatgagaatgacaacagccccgagttcgacatc
acctctgactcgtctgtcagcgtggctgaggacatcgccgtgggcaagagggtggccctg
gtgctggcccgagacccagatgcgggcagcaatggccaggtgactttctctctggcatcg
gggaatatcggccgtgctttcgagatccgcaccaccaacggcacctacggcgaggtgttc
gtggcgcggccactggaccgggagctgctggaccactacaccctacggatccaagcgtca
gacggcggcattcccccgcggaggaaggagcacattctgcgggtgaacatcctggatgtc
aatgacaacccccctgtcatcgacagccccttcggctacaacgtcagcgtgagcgagaac
gtgggcggcggcacggccgtggtccaggtgcgcgccaccgaccgcgacatcggcctcaac
agcgtcctctcctactacatcacgcgcggcaacgaggacctgaccttccgcatggaccgc
atcaccggcgagatcgccacgcggccctcgccgcccgaccgcgagcgccagagctcctac
tgcctcgtggtcaccgtggaggacgagggcacgccctccctgtcggccaccaccacggtg
tacgtcaccatcctggatgagaatgacaatgctcccgccttccggcagcagctctacgag
gtgaccctggacgagggcccctccagcctcaacgccagcctggtcaccgtgcaggccctg
gaccaggacgagggacccaacggcacggtggcttacgccatcaccgagggcaacatcttg
ggtaccttccacatcgacaacgccacgggggagatccgcacggtcaaggagctggactac
gagatcagccacgggcgctacaccctggtggtcaccgccaccgaccagtgccccatcgtc
tcgcggcggctgacgtccacagccacggtgctggtgaacctcaatgacatcaacgacaac
tgtcccaccttcccgcggccctacgaggggcccttcgatgtcaccgagggccagcccggc
cctcgtgtctggactttcctggcccacgacggcgactcggggcccagcggacaagtggaa
tacagcatcatcgccggggaccccctgggggaatttgtcatctcaccggtggaaggagag
ctgcgggtgcggaaggacgccgagctggaccgcgagaacatccccttctacaacctcacc
atcgccgcccgcgaccggggcgtgcctcccctcagctccaccatggtggtgggtgtccgt
gtgctggacatcaacgacaacgaccccgtgctgttgaacctgcccatgaacctcacgctg
agcgagagcgccgccgtctccagcttcgtcacccgcgtgctcgcccacgacgccgaccag
ggccccaacgcgctgctgaccttcgacataacagcagggaacacggagaatgccttctac
atcaacagcaccagtggcgttgtgtacgtgaaccgcccgctggacagggagcgggtggcc
gagtacaggctgacggtgacggtgaaggacaaccccgagaacatccgcaatgccaggcgg
gatttcgacctgctggtcatttccatagcggatgagaatgacaaccggcctcttttcacc
cagagctcctaccaggctgaggtgatggagaactcgccccctggagctgtgaagatcaaa
actcccctcaaccgtgaactagtggccacctacgaggtcaccatctctgtccatgacaac
gccagcgaagttatcgaccgctcggtcagcgtgcccaacgccaagctgacagtcaacgtc
ttggacgtcaatgacaacacaccccgcttccgtcccttcggggtcacctacttcactgag
cggatcctggagggagccacacagggcaccacactcatctccatctcagcagtggaccca
gacaaaggcgccaatgggcagatcacctacgagctgctgaacctctctccagaaggttac
gcctgtctggaagacccttcggcagggaaggttgtggccaacaggacggtggactatgag
gaggtgcagtggctgaacttcaccgtccgcgcctccgacaacggcactccccgcagatct
gctgagatccccgtgtacctgcagatcgtggacatcaatgacaacaaccctgttttcagc
caaccctcctaccagaaagctgtgtttgaggacgtgcccttgggtacggtcatcctgagc
gtcacggccaccgatgcggattccgggcagtttgctctcatccagtacagcctgagcgac
ggagagggcaagtttgggataaatcccaacacgggtgacatctacatcctgtcagccctg
gaccgggaaaagaaggatcactacacactgacagctgtggccagggacaaccctggggat
gtctccagcaaccgtcgggagaactctgtgcaggtgctgatcacggtgctggacatcaac
gacgtcaggccccagttcagcaagagccagttcagcaccagcgtgtacgagaacgagcca
gcggggacatcagtgatcaccatgagtgccaccgacctggacgagggggacaacggcgtg
gtgacctacagcattgagggtcctggagcagaggctttcaatatcaataaagactccggg
ctggtcacatcccggcggcgcctgaagtcctacgagaggttcaacctgactgtggtggcc
acggacaaggggcatccccctctctggggcaccaccatgctgcacatcgaggtcatcgac
atcaacgacaaccgccccgtcttcgtgcgcccgcccaacggcaccatcctgcacatcaag
gaggagatccccctgcgatccaacgtctacgaggtgtatgccacggacaaagacgagggt
ctcaacggagtggtgctctacagcctgctgaagacaggggcagggaacaaggactgggag
tatttcaccatcgactcggtcagcgggctgatccagacggccatgcggctggacagggag
cagcaggcagtgtacaacctgatcatcgtggcctccgaccagggccagccaccctacgag
accatgcagcccctgcaggtagagctcgatgacatcgatgacaatgaacccatcttcctc
aggccacctagggacagtccccagtaccaggcactctctgtccccgagcactcaccgcca
ggcaccgtggtggggaatgtcactggtgcggtggatgcggatgagggctccaacgccatc
gtctactacttcatagcagctgggaacgaggagagcaacttccagctaagccgggagggg
aagctgaaggtcctacgggacctggaccgggagaaggagccgtaccactccatcatcgtc
aaagcatccagccagaagaactgggctcctccccggggccagcaggcagccagagcccag
ttctgggacctcagcgaggacctgaccctgcaggaggtgcggatcttcctggacgacatc
aatgaccaggccccccagttcaccaagtcggagtacacggcgggggttgccaccgatgcc
aaggtggggtcggagctgatccgagtgctcgcagtggacgccgacgtgggcaacaacagc
ctggtcctgtaccacatcctgggtatccgctacatcaagcagcactccaatgactccgag
gaggtggccaacatcttcagcattggaacccttgatggcatcctgcgaaccttcgacctc
ttcactgcctacaaccccggctactttgtggtggacattatggcctctgacctggtgggc
cacaacgacacggccatcgtggggatttatatcctgcgggatgaccagcgggtcaagatc
atcatcaacgagatccctgacagggtcaggcagtttgaggaggagttcatcagcctgctc
tccaacatcaccggtgccatcgtcaacacggatgatgtgcagttccacgttgacaagaag
ggccgggtgaactttgcccagacagagctgctgatccacgtggtgaacagggagaccaac
cgcatcctggacgtggagcgagtcattcagatgatagatgagaacaaggagcagctgagg
aatctcttcaggaactacaacgtgctggacgtgcagcctgccatcactgcccgagcaccc
gacgacctctcggctctgcagatggcaatcatcgtgctggctgtcctgctcttcctggct
gccatgctcttcatcctcatgaactggtactaccggacagtgcacaaaaggaaactgaaa
gccatcgtggctggctccactgggaacagaggcttcatggacatcatggacatgccaaac
accaacaagtactcctttgatggggccaacccggtgtggctggaccccttctgcaggaac
atggagctggcggcgcaggcggagcacgaggacgacctgccggagaacctgagcgagatc
acggacctgtggaacagccctgcgcgcacccacggcaccttcggccgggagccctcggcc
gccaagcccgaggatgaccgctacctgcgcgccgccatccaggagtacgacaacatcgct
aagctgggccagatcatgcgggagggacccatcaagctgatccagaaggagctggaggac
gaggaggaggagcgcagccccagccagggcagcctgcgcttccggcacaagcagccggtg
gagctcaagggtccggacggcatccacgtcgtgcacggcagcacgggcaccctgctcgcc
tccgacctcaacagcctgcccgaggacgaccagaaggtgctgggccgctcgctggagact
ctgaccgccgactgcgggggctacagcgaccacaacgcccgcaccgagtcggccaagtcc
acgcccttgcacaagatgcgggaggtgatcatggagagccctctggagatcaccgagcta
tga
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integrated database retrieval system
