Zonotrichia albicollis (white-throated sparrow): 102067861
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Entry
102067861 CDS
T07911
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zab03000
]
102067861 (CTCF)
03036 Chromosome and associated proteins [BR:
zab03036
]
102067861 (CTCF)
Transcription factors [BR:
zab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102067861 (CTCF)
Chromosome and associated proteins [BR:
zab03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102067861 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
102067861
NCBI-ProteinID:
XP_005490791
Ensembl:
ENSZALG00000007759
UniProt:
A0A8D2MI15
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MKRTNQSRQKCRSAKNINQEGEMEGEAVDAIVEESETFIKGKERKTYQRRREGGQEDDAC
HIPPNQADGSEVVQDVSSGVQMVMMDQLDPTLLQMKTEVMEGAVSQETEATVDDTQIITL
QVVNMEEQPINLGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTL
PLPEGFQVVKVGANGEVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEG
KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRR
SNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELV
RHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHM
RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK
QHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHT
GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCS
GLDGGEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPE
VEQEAPAPPPSKKRRGRPPGKAAAQPKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAET
AEEEEEAQPAVVEAPNGDLTPEMILSMMDR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaacaaatcagtccaggcagaagtgcagaagcgccaagaacataaatcaggaa
ggtgaaatggaaggtgaggcagtcgacgctattgtggaggaatcagaaactttcattaag
ggaaaagagaggaaaacctatcaaagacgccgtgaaggtgggcaagaggatgatgcttgt
cacataccaccaaaccaagcagatggcagtgaagtggtgcaggatgtcagcagtggggtg
cagatggtgatgatggatcaactggatccaactcttcttcaaatgaagaccgaagtaatg
gaaggtgcggtgtctcaagaaactgaggctactgtggatgacacacagatcataacactt
caggttgttaatatggaagagcagcctataaaccttggtgagcttcagctggtccaagta
cctgtaccagtgactgtacctgttgccaccacgtctgtggaagaactgcagggagcttat
gaaaatgaggtttccaaaggaggcctgcaggagggggagcccatgatctgtcacaccctc
cctttaccagaaggcttccaagttgtgaaagtgggtgcaaacggtgaggtggagacactg
gaacaaggtgaacttcagccacaggaagatcccaattggcaaaaagatccagactatcag
ccaccagccaaaaaaacaaagaaaaacaaaaagagtaagcttcgctacactgaggaaggc
aaagatgtggatgtctctgtatatgactttgaagaggagcagcaggagggtttgttgtcc
gaggttaatgcagaaaaggtggtgggcaatatgaagccaccaaaaccaacaaaaattaaa
aagaaaggtgtaaagaagacattccagtgtgagctgtgcagttacacttgtcctcgtcgt
tccaacctggaccgccacatgaaaagccacaccgatgaaagaccacacaagtgccatctc
tgtggcagggctttcaggacagtcacattgctgaggaaccacctcaacactcacacaggt
actcgccctcacaagtgcccagactgcgacatggcctttgtgaccagtggagagttggtt
cggcatcgccgctacaaacacacccacgagaaaccattcaaatgttccatgtgtgactat
gccagtgtggaggttagcaaattgaaacgccacatccgctcgcacaccggggagcgcccg
ttccagtgcagcctgtgcagctatgccagcagagacacctacaaactgaagaggcacatg
aggacccactccggagagaagccatatgaatgttacatctgccatgctcgcttcactcag
agcggtaccatgaagatgcacattttgcagaagcacacggagaacgtggccaaattccac
tgtcctcactgtgatactgttatagcgagaaagagtgacctgggtgtccacttgcggaag
cagcattcctacattgagcagggcaagaagtgtcgctactgtgacgctgtgttccatgag
aggtatgccctcatccagcatcaaaagtcccacaagaacgagaagcgcttcaagtgtgac
cagtgtgattatgcctgcagacaggagcggcacatggtcatgcacaaacggacccatact
ggagagaagccttatgcctgtagccattgtgataaaaccttccgccagaagcagctcctg
gacatgcacttcaagagataccacgaccccaactttgtccctgctgcctttgtctgctcc
aagtgtggcaaaacattcactcgcaggaacacaatggccagacatgctgataactgctct
ggcctagatggtggggaaggagagaacggaggagagacaaagaaaggcaaacgtggccga
aagagaaagatgcgttctaagaaagaagattcttctgatagtgaggaaaatgctgaacca
gatttggatgataatgaagatgaggaggagacagcagtagaaattgaggctgaaccagaa
gttgagcaagaggctcctgcaccacctcccagtaagaaaagaagaggaagaccaccaggc
aaagctgctgcgcaaccaaaacaatcccagcctgcagcaatcattcaggttgaagaccag
aacactggtgaaattgaaaacattatagttgaagtgaagaaagaacctgatgcagaaaca
gcagaggaagaggaggaagctcagcctgctgtagtggaagctcccaatggagacctcacc
cctgagatgattctcagcatgatggaccggtga
DBGET
integrated database retrieval system
