Zonotrichia albicollis (white-throated sparrow): 102068370
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Entry
102068370 CDS
T07911
Symbol
CNTN1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102068370 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zab04515
]
102068370 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
zab00537
]
102068370 (CNTN1)
Cell adhesion molecules [BR:
zab04515
]
Immunoglobulin superfamily
Contactins
102068370 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
zab00537
]
Others
102068370 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Interfer-bind
Tissue_fac
DUF4998
Fn3-I_PB4
Big_3_4
NDNF
Motif
Other DBs
NCBI-GeneID:
102068370
NCBI-ProteinID:
XP_005480578
Ensembl:
ENSZALG00000008974
UniProt:
A0A8D2MP47
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MMVLKCTVPFEMMAEQKITIWFFIYHLITPCFVYSLAIEEGNKGYGPVFEEQPIDTIYPE
ESSDGQVSMNCRARAVPFPTYRWKFNNWDIDLTKERYSMVGGRLVINNPEKSRDAGKYVC
VVSNVFGTVRSSEATLSFGYLDPFPPEERYEVKVREGVGAVLLCEPPYHYPDDLSYRWLL
NEFPVFIALDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPQSD
RAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPLPASAEISMSGAVL
KIFNIQYEDEGLYECEAENYKGKDKHQARVYVQAAPEWVEHINDTERDIGSDLYWPCVAT
GKPIPTIRWLKNGASFRKGELRMQSLTFDDAGMYQCIAENMYGIIYANAELKIVASPPTF
EFNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGSRIRIWDDGSLEIINVT
KLDEGRYTCFAENNRGKANSTGVLEMTEATRITLAPLNVDVTVGENATMQCIASHDPTLD
LTFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYMCTAQTIVDNSSAS
ADLVVRGPPGPPGGIRIEEIRDTSVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAKTD
PSDIEGNMESATVIDLIPWMEYEFRIIATNTLGTGEPSMPSPRIRTEGAPPNVAPSDVGG
GGGSNRELTITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTNPEIGRYVHKDESMP
PSTQYQVKVKAFNNKGDGPFSLTAVIYSAQDAPTEIPTDVSVKVLSSSEMSVSWHHVTDK
SVEGYQIRYWAAHDKEAAAQRVQVSNQEYSTKLENLKPNTRYHVDVSAFNSAGYGPPSST
IDVVTRKAPPSQRPRIISSVRSGSRYIITWDHVKAMSNESAVEGYKVLYRPDGQHEGKLF
STGKHTIEVPVPSDGEYVVEVRAHSEGGDGEVAQIKISGAAVGVPTLLLVLVVPALGVLA
CSGF
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgatggtattgaagtgcacagttccttttgagatgatggctgaacagaagataaccatt
tggtttttcatctatcatcttattacaccctgttttgtctactccctggcaatagaagaa
ggaaacaaaggttatggacccgtttttgaggagcaacctattgataccatctatccagaa
gaatcttcagatggacaagtttcaatgaactgcagagctcgagcagttccttttcctact
tacaggtggaaattcaacaattgggatattgacttaacaaaggagcggtacagcatggtg
ggaggcagactcgttatcaataatccagagaaatcaagggatgctggaaaatatgtctgt
gtagtgtcaaatgtctttggaactgtcagaagcagtgaagccactctgagttttggatat
ctggatccctttccacctgaggaacgttacgaggttaaagtgcgagaaggtgttggggca
gtgcttctttgtgaacccccttatcactacccagatgacctcagttatcgctggcttcta
aatgagttcccagtgttcattgctttggacaaacgacgatttgtgtcacagacaaacggc
aatctctacattgcaaatgtggaagcatcagataagggcaattattcatgttttgtgtcc
agcccttccataacaaagagtgtattcagtaaatttattccacttattcctcaatctgat
cgagcaaaagtgtatcctgctgatatcaaggtgaagttcaaggacacgtacgctctcttg
ggacaaaacgtgacactggagtgttttgctcttggaaatccggttcctgagctcagatgg
agtaaataccttgaacccttgccagcctctgctgagataagcatgtctggtgcagttctt
aagatcttcaatattcagtatgaagatgaagggctttatgagtgtgaagctgaaaactat
aaaggaaaagataaacaccaagcaagagtttatgtacaagctgctcctgagtgggtagaa
catatcaatgacacagaaagggatataggcagtgacctgtactggccttgtgtagctacg
ggcaagcctattccaacaattaggtggctgaagaatggtgcctcgttccggaaaggtgaa
ctaagaatgcaaagtctgacctttgacgatgccggcatgtaccagtgtatagcagaaaac
atgtatggaattatttatgcaaatgctgaactgaagattgtggcttcacctcctactttt
gaatttaaccctatgaagaagaaaatcctagcagctaaagggggacgtgtaatcattgaa
tgcaagcctaaagctgctcctaagccaaaattctcctggagcaaaggaacagaattgctt
gtaaatgggagccgcatacgtatctgggatgatgggagcctggaaattatcaatgtcaca
aagctggatgaaggtcgctacacctgttttgcagaaaataaccgaggaaaagccaatagc
actggtgttctagaaatgacagaagctacaagaattactttagctccattgaatgtcgat
gtcaccgttggagagaatgctaccatgcaatgcattgcatcccatgatcccacattagac
ctgacatttatctggtctctaaatggctttgtaatagattttgagaaagaacatgaacat
tatgagcggaatgttatgattaaatccaatggtgagctgctgattaaaaacgtccagctg
cggcatgcagggaggtacatgtgcactgctcagacaattgtggacaactcctccgcttca
gctgaccttgtggtaagaggtcctcccggcccccctggaggtataagaatagaagaaatc
agagacacttctgtagcacttacctggagtcgtggaacagacaatcatagtcctatttct
aaatacactatccaatcaaaaacctttttatctgaagagtggaaagatgccaaaacagac
ccatcagatattgaaggaaatatggaatctgctacagtgattgatttaattccatggatg
gaatatgaattccggataatagccacaaacactctggggacaggagagcccagcatgcct
tcgccaaggattagaactgaaggcgctcctcctaatgtggctccttctgatgttggagga
gggggtggaagcaatcgagagctgacaataacatggatgcctttgtcaagagaataccac
tatggcaataactttggttatatagtggccttcaagccatttggtgagaaagaatggaga
agagttacagttactaatcctgaaattggccgctatgtccacaaggatgaatcaatgcca
ccttcaactcagtatcaagtaaaagtgaaagcttttaacaacaaaggggacgggccattc
agcctcactgctgtcatttattcagcacaagatgctccaactgaaatacctacagatgtg
agtgtaaaggttttgtcatcttctgaaatgtctgtttcttggcaccatgttactgataaa
tctgtggagggatatcagattcgttactgggctgctcatgataaagaagcagctgcacag
cgggtgcaggtgagcaatcaagagtattcaaccaaactggaaaacctgaagcctaacact
cgctaccatgtggatgtgtctgccttcaacagtgcaggctatgggcctcccagcagcacc
attgatgttgtcacaaggaaagcacctccgagccaacgcccgaggattatcagttctgta
agatctggttcaaggtacatcatcacctgggatcatgtgaaggcaatgtcaaacgagtct
gccgtcgaaggatacaaagtactttataggccagatggacagcatgaaggcaagttgttt
tccactggaaagcacacgatagaggtcccagtccccagcgatggtgaatatgttgttgag
gtgcgagcacacagtgaaggaggagatggagaagtagcccaaataaaaatttcaggtgcc
gctgttggagtgccaactctgctcctggtcctagtggtgcctgccctgggtgtccttgcc
tgctcgggattctga
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integrated database retrieval system
