Zonotrichia albicollis (white-throated sparrow): 102068494
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Entry
102068494 CDS
T07911
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zab04131
]
102068494 (VPS50)
Membrane trafficking [BR:
zab04131
]
Protein recycling
Others
EARP complex
102068494 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
102068494
NCBI-ProteinID:
XP_005480306
Ensembl:
ENSZALG00000014115
UniProt:
A0A8D2QHL9
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQESVNDLSPIENLRIPTKEELRELHEEPPDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQSGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAAVVSSD
GNNVIGTEENSFDRNYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLDVI
SRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSSFS
ILQLHEFKFLEQSRSPSVSPSKQPASAASSAVTLFEQYCAAGNPFEIQADSKDDETEDVL
ASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPIKSVSRETLRSRKRSDYNL
NKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRNDM
FESTGLGLSSSRLRTTLNRIQESLIDLEVSADPSGTLTAAEERKEKVPSPHLSHLVVLTS
GNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELRKP
VYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVDALLKEFEEFNRRLNDVSKRVRI
PLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPD
KEFVETYIKAYYLTENDMESWIKEHREYSTKQLTNLVNICLGTYINKKARQKLLATIDDT
DRPKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctacgaagtcctcaggagagtgtt
aatgacctcagtcctattgaaaacttacggattcctactaaggaggagctcagagaacta
catgaagaaccacctgatcctcaggcacaacaggaaataattaacagcattgaagaagtt
tatttttccaatgactcctttgatatagtgaagtatgagttagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagacaaactaaaacaacagcaagctgctgta
tctaagaaagttgcagatttaatccttgaaaaacagcctgcatatgttgaggagcttgaa
cgtgttacatcattgcagagtggccttcagctggcggcggttatttgcacaaatggaaga
agacacctgaatatagcaaaggaagggttcacacaaactagtttggggctccttgcaaat
cagaggaaacgacagttgcttattggactgctaaaatctctgagaacaataaaaacactg
caaagaactgatgtgcgtttgagtgagatgttggaggaggaggattatccaggagctatt
caactatgcttggaatgccagaaagctgccagcactttcaaacactacagttgtataagt
gagttaaattcaaaactgcaagacaccttggaacaaatagaggaacaattggacgtagca
ctttccaaaatatgcaagaattttgatatcaatcattatacaaaggttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcacccaagcc
attcacaacactgtgtttcaagtagtccttggatatgtggagctgtgtgcaggaaacaca
gacaccaagttccagaagttacagtacaaagacctctgtacacacatcacatcagacagc
tacattccatgccttgctgatctctgcaaagccctctgggaagtcatgctcagttactac
cgaacgatgcagtggcatgagaaccatgaccaagatgaggcagcggttgtgtcttctgat
ggcaacaatgtgattggaactgaagagaacagttttgaccgcaactatgtaaaaaagaaa
ttggagcatgggctttcacgaatatggcaggatgttcagttgaaagtgaaaacatatctt
ctgggaacagatttgtctaacttcaaatatgatgacttcatatttgtacttgatgttatc
agcaggctgatgcaggttggagaagaattttgtggcagtaagtctgaagttttgcaagaa
tctatcagaaaacaaagtgttaactatttcaaaacataccacagaacccgtcttgaggaa
ctaagaatgtttttggagaatgagacctgggaactttgtcctgttaaatcaagctttagt
attttgcagcttcacgaatttaagttcctggagcagtcgcgctccccgtcggtgtcgccg
agcaagcagcctgcctctgcggcgtcatcggccgtcacgctgtttgagcagtactgcgcc
gccggaaaccccttcgaaatccaggccgacagcaaggatgatgagacagaggatgtgcta
gcttccaatgggtatgaatcagatgaacaagaaaaaagtgcatatcaagagtatgatagt
gacagtgatgttcctgaagagttgaaaagagattatgtggatgagcagacaggagatgcc
ccaattaaaagtgtttctcgagaaactctgaggagcagaaagagatcagattataacctc
aataaagtgaatgcacctattctaaccaacactacactgaatgtaataaggcttgttggg
aaatacatgcagatgatgaatattctgaagcctattgcatttgatgtgatccacttcatg
tcccagctctttgattactatctgtatgcagtctatacattttttggccgaaatgacatg
tttgaatctacaggactgggcctcagcagcagcagattacgcaccacactgaacagaatc
caggagagtctgattgatctggaggtgtctgctgatccttcagggactctcacagctgct
gaagagagaaaagagaaggtgccaagcccacatctcagtcatctcgtagttttgacatct
ggcaattcgctgtatggcttggcagagagagtggtggccacagaatccttggtatttctg
gctgagcagtttgaatttcttcagcctcatcttgatgcagtgatgccagctgccaagaag
ccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactacgtaaacca
gtttattggattgttgctgctaaagccattgactatgaacaaatgcttctactgatggct
aatgtgaaatgggatgtgaaggaaatcatgtcacagcacaatgtatatgtagatgctctt
ttaaaggaatttgaagaatttaacaggaggttgaatgatgtgtctaagagagtccgtatt
ccattgccagtctccaacatcctttgggagcactgcatacgcttggccaatagaaccctt
gtggaaggttatgccaatgtaaagaagtgcagtaatgaaggacgtgccttgatgcagctg
gattttcaacaattcttaatgaaactagaaaagttaacagacattaggcctattccagat
aaagaatttgtggaaacctacattaaagcatactacctgacagaaaatgacatggaatcc
tggataaaagaacatagggaatattccactaagcagctgaccaatctggtgaatatttgt
ctgggcacctacatcaacaaaaaggcaagacagaagctgttagctaccattgatgacaca
gacaggcctaagagataa
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