Zonotrichia albicollis (white-throated sparrow): 102068574
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Entry
102068574 CDS
T07911
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zab03019
]
102068574 (HELZ)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
102068574 (HELZ)
3'-5' decay
Other 3'-5' decay factors
102068574 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
AAA_22
zf-CCCH_4
AAA_16
AAA_7
Bac_DnaA
AAA_5
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
102068574
NCBI-ProteinID:
XP_014124925
Ensembl:
ENSZALG00000017405
LinkDB
All DBs
Position
Unknown
AA seq
1941 aa
AA seq
DB search
MADRRPEKACEQACECLKQQDYEVAVKHCTEALLSLSQYPPAHLPEPCQAELDRIKIETL
LYRIASFLQLKKYGQADEDCRHVLGEGLAKGDGSLRAVLCCMHLKGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKTLLAETEAAGKVPSGYHVEDLEEGSRDGWHFRPPPRGVTSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGTYMETLIE
KWMNSLSPEKVLSECVEGVRVEHNPELSVTVTTKKSHQTWTFALTCKPARMLYRVALLYD
AHRPHFSIVAISAGDSTTQVSQEVPENCQEWIGGKMVQNGIDHYIYKVSIAFNTEIFGTF
RQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVEFEPNET
TELERSLLTRYQIPLSADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVTK
EKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLC
EMHYALDRIKDNSILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQDTSRILICTHSNSAADLYIKDYLHPYVEAGNP
QARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQ
LDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPL
TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV
FRIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDST
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGI
TFEQIKAQLEALELKKTYVLNPLAPEFIPRALRHQHSANPSKQQQSPPKGKVHHHNQNDH
FPPDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNMVMSVPLPVPWTGYQGRFAVDPRLITHQAAMAYNMNLLQAHGRGSPIPYGLGHHSPV
SIGQQQLPHQDKEQHEQTRNGKSENTAGPEINKIRTPEKKPLESKQVDLEAAPQQRSPES
RSSVGYPSAKFHRKDNPAPRQLNLHLTPPHSQFAVPSRHFQHLSQIPRQPYPLQQQQQQQ
NLLNQQQNHLPEQPNQMPPQQSQVVQQHNHLNQQPPPPSQLSPAFQAGPSQSFFNNPIPH
RPHSPAVDAVISEQHPPPLLQEVNNPLRPIAQHNPVLPTHLNNFIEENPSGMPLGDTLDR
MHGNVALETIRQQQQARLQQWNEHNAYLSQGTIPYQHHHHPHLPHLPQQPIGLHQQQQVR
ANWKLASNTEDETEATYSRFQDLLRELSQRDPSESRDGAEMPPPQSRLLQYRQVQPRSPP
ALPSPSCNSNHFPTFTENSRDIELPTNPAFQQHLPQMYNPPFSMPSEHITPSPLKYLQPD
GSWTYANLQQNHLLGQGFHYGIPPLPHRSQQSPFIQIQNHQHAVGQEPFHPLASRAVSAS
SLHSLEEYEPRGPGRPLYQRRISSSSVQACSEELSTPQDSLGQCKELQDHSTQSSFNYSS
PELWVNSSSSAPYPNIPCNGASRAVPPRELLAPPKAAKPPEEHLKAENIQLSNSFNYNVL
QHLGQFPPLMPNKQLVESNSSSPQPAGGTKPVMSYASALRAPPKPKPPPEQTKKNSDPLS
LFQELSLGSSSGSNGFYSYFK
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaaggcatgtgaacaagcatgtgaatgccttaagcagcag
gattatgaagtggcagtgaagcattgcactgaggctctcctttccctcagccagtacccc
ccagctcacctcccggagccctgccaggcagaactcgaccgcatcaaaatcgagactctt
ctgtatagaattgcttcctttttacaacttaaaaagtatgggcaagcagatgaagactgt
aggcatgtgctgggagaggggctggccaagggcgatggatctctgcgggcagtgctctgc
tgcatgcatctcaaagggaagctgcaaattgtgtctaatgttctttccaaatcactgatg
ggggaatcactgaacgggatggtaactaaagatctcacacgactgaaaacacttcttgct
gaaacagaggcagctggtaaagtaccatcaggatatcatgtagaagatttagaagaaggg
tcacgggatggttggcacttccgcccccctcccaggggcgtcaccagcagtgaggaatac
acactttgtaaaagatttttagagcaagggatctgcaggtatggtgcccagtgtacttca
gcacattcccaggaggagctgacagagtggcagaagcgctacgcttcccgcctgatccgc
ctgaaacagcagaaggagaacaagcagtgctcaggcacttacatggaaaccctcattgag
aaatggatgaattccttgtctcctgagaaagtgcttagtgaatgtgtagaaggagtgaga
gtagaacataatcccgagctctcagtcactgtcaccaccaaaaagtctcaccagacatgg
acatttgctctcacatgtaagcctgccaggatgctgtaccgagtggcattgctgtacgat
gcccatcggccccacttcagtatcgttgcaatatctgctggagacagcactacccaggta
tcccaggaggtcccagagaactgtcaggaatggataggagggaagatggtccagaatgga
atagatcactatatatacaaagtcagtatagcctttaacacagaaatctttgggactttc
cgccaaactgtggtgtttgactttggattagagccagtcctcatgcaacgagtgatgatt
gatgctgcttccactgaagacctcgagtacctgatgcacgcgcggcagcagctcctgacc
acggccaagcgctgggattccacctccaagaccattgtggagtttgagcccaatgaaacc
actgagctggagaggagccttctgaccagataccaaatccctctgtctgccgaccagctg
ttcacacaatctgtcctggacaaatcactgaccaagagcaactatcagtcccggctccat
gacctcctgtacatcgaggagattgcacagtataaggaagttagcaagttcaacataaaa
gtgcaattgcagattgtagcaagcttcatgctcactggtgtttctggaggtgcaaaatat
gcccaaaatggacaactttttggccgctttaagctcactgagaccctctctgaagacact
ttggctggacggctggtgatgaccaaagtcaatgctgtttatttattgcctgtcactaaa
gaaaagtcagcccagacccaaggaaccaaagagaaggtttatgaagcagctattgaggag
aaaacaaaggattatatcttcttgagggtctccagggaatgctgtgaggagctgaatctt
cgggcagattgtgaaatgcaggttgagctccagttccagctgaaccggttgcccctgtgt
gagatgcattatgccttggacaggattaaggacaacagcattttgtttccagatgtcagc
atgactcccaccataccctggagtcccaacaggcaatgggatgagcagttggacccccgg
ctgaacgcgaagcagaaagaggctgttctggctatcaccacccccctctccatccagctg
cctcctgttcttatcatcggtccctatgggacaggaaaaaccttcactctggctcaggca
gtcaagcacatcctccagcagcaggacaccagcaggattctcatttgcacccattctaat
agtgctgctgatctctacataaaggattatttacatccctatgtagaagcaggcaatccc
caggcaagacctctcagggtatatttccgaaatcgctgggtaaagactgttcacccagtt
gtgcatcagtactgtttgatttcaagcacacattccaccttccagatgccacagaaagaa
gacattcttaagcaaagagtagtagttgttactttaaatacatcacagtatctatgtcag
ctggatcttgaaccagggttttttacacacattctgttagatgaagctgctcaagctatg
gagtgtgaaacgattatgcctctggcattagctaataaaaacacaagaattgtcttggct
ggagaccatatgcagctcagtccttttgtctacagtgaatttgccagggagagaaatctc
cacgtgtccttgctggaccggctctacgagcactaccctgccgagttcccgtgcaggatc
ctgctctgtgagaactatcgctcccatgaagcaatcatcaattacacatctgaacttttc
tatgaaggcaaattgatggcaagtggaaagcagccagcacacaaagatttctaccctttg
actttcttcacagcacgtggagaagatgtgcaagaaaaaaatagtacagctttttacaat
aatgcagaggtgtttgaggtggtggagcgcgtggaggagctgaggaggaagtggccggtg
gcctggggcaagctggacgatggcagcatcggggtggtgaccccgtacgccgaccaggtg
ttccgcatccgcgccgagctgcgcaagaagcgcctgtcggacgtcagcgtggagagggtg
ctcaacgtgcagggaaaacagttcagagttctgttcctcagcacagtacgaacacggcac
acatgcaaacataagcaaactccaattaaaaggaaagagcagttactggaggattccaca
gaagacttggattatggttttctgtctaattacaaacttctcaacactgccattacaaga
gcacaatccttagtagctgtggttggagatcctattgctttatgttccattggaagatgc
aggaaattctgggaaaggttcattgccctgtgccacgagaacgaaagtctgcacggcatc
acgtttgagcagatcaaagctcagctggaagctctggagttgaagaaaacctacgtgctg
aacccgctggcccccgagttcatcccgcgcgcgctgcggcaccagcactcggccaacccc
agcaagcagcagcagtcgcctccaaagggcaaggtccatcatcataaccagaatgatcat
ttcccacctgatggaattgttcagcccaatccttctgttctaattggaaatcctatccga
gcatacactcctccccctcctcctctgggacctcaccccaacctggggaaatctccaagt
cctgttcaaaggatagatccacacactgggacaagtattctctatgtacctgctgtctat
ggaggaaatatggtcatgtctgtgcctttgcctgtaccgtggacggggtatcagggtagg
tttgcagtcgaccctcgcctcattactcaccaagcagccatggcatataacatgaacctg
ttacaggcacacgggcgagggtccccgatcccctacggcctgggccaccactcccccgtt
agcataggacagcagcagctcccccaccaggacaaggagcagcacgagcaaactcgaaat
ggtaaaagtgaaaacactgctggacctgaaatcaataaaattcgaacacctgagaagaaa
cctctggaatccaagcaggttgatttagaagcagcccctcagcagagaagcccagagtcc
cgttccagtgtgggttaccccagtgctaaattccatcgcaaggacaaccctgcccccagg
cagctgaacctgcacctgaccccgccccactcccagttcgcggtgcccagccgccacttc
cagcacctctcccagatcccgaggcagccctaccctctgcagcagcagcagcagcagcaa
aacctcttaaaccaacagcaaaatcacttgcctgaacagcccaaccaaatgccaccccag
cagagccaggtagttcagcagcataatcacttgaatcagcagcctccaccaccttcgcag
ctttcccctgctttccaggcaggccccagccagtccttttttaataatcccattccccac
cgaccacattctcctgctgtagatgctgtgatttcagagcaacaccccccacctctgtta
caagaagtcaataatcctttgaggcctattgcacagcacaacccagttctgccaacccac
ttgaacaacttcattgaagagaatccatcaggaatgcccttaggggacactttagatcgt
atgcatggaaatgtagctttggaaacaataaggcagcaacaacaagccaggttacagcaa
tggaatgaacataatgcctatctcagtcaaggcactattccatatcaacaccatcaccat
cctcatctaccacatcttcctcagcaaccaattggattacatcaacagcagcaagttagg
gcaaactggaaacttgccagtaatacagaagatgaaacagaggcaacatattcaagattc
caggacctgctccgggagctgtcgcagcgcgatcccagcgagagccgggacggcgccgaa
atgccgcccccgcagtcgagactgttgcaatacagacaagtgcagccccggagcccacca
gcactcccttctccttcctgcaactccaaccacttccccaccttcactgagaacagcaga
gacattgaactgcccactaacccagcatttcagcagcatttaccccaaatgtacaacccc
cctttctcaatgccatccgaacacataaccccgtctcccttgaaatacctgcaacctgat
gggtcctggacttatgctaacctgcagcagaatcacctcctggggcagggctttcactat
ggaatacctccactgccccacaggtcgcagcaaagcccttttatacaaatccagaatcat
cagcacgcagtcggtcaggagccatttcatccactcgcatctcgagcagtttctgcttct
tcgctccacagcttagaagagtatgaaccaagaggaccaggcaggccgttgtaccaaaga
agaatttcctctagttcagtccaggcttgttctgaagaattaagcactcctcaagacagt
cttggtcagtgtaaagagcttcaggaccacagtacccagtcatcgttcaactactcctcc
cctgagctgtgggtgaactcctcctcctctgccccgtacccgaacattccatgcaacgga
gccagcagggccgttcccccccgggagctgctagctcccccgaaggcggccaagcccccg
gaggaacacctgaaggctgagaacatccagctctccaactccttcaactacaacgtgctc
cagcacctgggccagttcccccctctgatgcccaacaagcagctggtggagtccaacagc
agcagcccccagcccgcgggcggcaccaaacccgtcatgtcctacgccagcgccctgcgg
gctccccccaagcccaaaccccctcctgagcagacaaaaaagaacagcgaccccctgtcc
ttgtttcaggaacttagcctaggtagttcatcaggtagcaatggcttttactcctatttt
aaataa
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integrated database retrieval system
