Zonotrichia albicollis (white-throated sparrow): 102068654
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Entry
102068654 CDS
T07911
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab00100
Steroid biosynthesis
zab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
102068654 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
zab01006
]
102068654 (FDFT1)
Enzymes [BR:
zab01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
102068654 (FDFT1)
Prenyltransferases [BR:
zab01006
]
Terpene biosynthesis
Squalene/phytoene synthase
102068654 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
SCC3_C
Motif
Other DBs
NCBI-GeneID:
102068654
NCBI-ProteinID:
XP_005495474
Ensembl:
ENSZALG00000011552
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MELLRKWLGHPEDIYNLLRFKMGGYRAVMPRMDTDSLGCGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTVEDDMSIPLDVKVPMLHEFHSYLYQPDWKYTESKEKDR
QVLEDFPTISMEFRKLSKVYQDVISDICHKMGVGMAEFLEKKVDSQHEWDKYCHYVAGLV
GIGLSRLFSASELEDSIVGQDTELANSMGLFLQKTNIIRDYLEDQMEGREFWPREVWSRY
AKKLSDLAKPENIDAAVQCLNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIAT
LAACYNNQQVFKGVVKIRKGQAVTLMMDATNIQAVKAIMYQYVEEIYQKMPSTDPSCRRT
QQAIAAIRAASLPAGPMASRHHYSPIYLSCAMLLAALSWQYLSTLSKATEEYVQAGDN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctactgcggaaatggctgggccaccccgaggacatctacaacctgctccgcttc
aagatgggcggctaccgcgccgtcatgccgcggatggacacggactcgctgggatgtggc
ctccgaacctgctaccggtacctcaaccagaccagccgcagcttcgccgccgtcatccag
gctctggatggagagctgcgccatgcagtgtgtatattctacctggttctccgtgccctg
gatactgtagaggatgacatgagcatccctttggatgtcaaggtcccgatgctgcacgag
ttccactcctatctctaccagccagactggaagtacacagagagcaaggagaaggacagg
caggtgctggaagacttcccaacgatctccatggagttcagaaaactgtccaaagtctac
caggatgtgatttcagatatttgtcacaagatgggtgttgggatggcagagttcttggag
aaaaaggtggattctcagcatgagtgggacaagtattgtcactacgttgctgggctggtg
gggattggcctctcccgtctcttctctgcatcagagctggaagattccatcgtggggcag
gacacagagctggcaaactccatgggcctcttcctgcagaaaaccaacatcatccgtgac
tacctggaggaccagatggagggaagggagttctggcccagagaggtttggagcagatat
gcgaagaagctctcagaccttgccaagccagagaacatcgacgcggccgtgcagtgcctc
aatgagctcatcaccaacgccctccaccacgtccccgacgtcctcacctacctgtcccgc
ctcaaaaaccaaagtgtcttcaacttctgcgctatcccccaggtgatggccattgccacg
ctggctgcctgctacaacaaccagcaggtgttcaagggggtggtgaagatccgcaagggc
caggctgtcaccctcatgatggatgccaccaacatccaagctgtcaaagccatcatgtac
cagtatgtggaagagatctaccagaagatgccgagcacggacccctcgtgccgcaggacg
cagcaggcgattgccgccatccgcgccgccagcctgcccgccggccccatggcctcccgc
caccactactcgcccatctacctgtcctgtgccatgctgctggctgccctgagctggcag
tacctcagcaccctctccaaggccaccgaggagtacgtgcaggcaggggacaactga
DBGET
integrated database retrieval system
