Zonotrichia albicollis (white-throated sparrow): 102068675
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Entry
102068675 CDS
T07911
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zab04121
]
102068675 (PDZRN4)
Enzymes [BR:
zab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102068675 (PDZRN4)
Ubiquitin system [BR:
zab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
102068675 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
102068675
NCBI-ProteinID:
XP_014128335
Ensembl:
ENSZALG00000008975
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MSHISSIARDLAGGQPGKGGVRKPLMIMLHRENDTLGFNIIGGRPNQNNQEESAEGIYVS
KILENGPADKAEGLQIHDRIIEVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRAPAAKA
HSGSQDVRLMDASTQTDITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSLHPVEHEFYE
GNEYLSSLPADADRAEDFEYEEVELCRIGSQEKLGLTVCYRTDDEEDTGIYVSEVDPNSI
AARDGRIREGDRILQINGQDVQNREEAVALLSSEECRKIVLLVARPEMQLEEGWLDDERN
EFLEELNLEMLEEQHNEAMQYTANEVEQPKKHEEEDGTTDTATSSSNNHEKDSGVGPTDE
SLRNDESSEQENAAEEQNGATLQSKRDLGHSQDTLGSVELQCNESFVSGEYIESDFTGNP
EEECERFRQLLELKCKIRNHGEYDLYYSSSMIECNRRDQDGVEHELQLLNEELRNIELEC
QNIMQAHRLQKVRDQYGDIWSLHDESFRNYNTSTDVQRGKLDDIMEHPEKSDKDSSSAYN
TAESCRSTPLTVERSPDNSLQRVISITNRKNLRTTIVANQSSSGQSNRETTSAKTKPTEQ
NSAAENAVLASESSKFTDQDRQGSEHIPYLSPYHSSSYRYGNIPAHAKHYQSYMQLIQQK
SAVEYAQSQLSLVSMCKDSQKCAEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKE
ERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSE
GKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgagccacatcagcagcatcgcccgggacctggcgggcggccagccgggcaagggagga
gtgcgcaaaccactgatgatcatgctacaccgagaaaatgacactttgggcttcaatatt
ataggaggacgacccaatcagaacaaccaggaggaatctgctgagggaatttatgtgtca
aagattttggaaaatggacctgcagacaaagcagaaggcctgcaaattcatgacaggatt
attgaggtcaatgggaaggacctgtccaaggccactcacgaggaggccgtggaagctttc
cgcaatgccaaggagcccatcgtggttcaggtgctacgacgagccccagctgccaaggct
cacagcggctctcaggatgttcggctcatggatgccagcactcagactgacatcactttt
gagcacatcatggctctggccaagctaaggccttccacaccaccagttccagatatctgc
ccttttctcctttcagatagctgccattctcttcacccagtggagcatgaattttatgaa
ggcaatgagtatctttccagcctgcctgctgatgcagatagagcagaggactttgagtat
gaggaggtggagctgtgccgcattggcagccaggagaagctggggctgactgtctgctac
agaaccgatgatgaggaggacacgggaatctatgtcagtgaggttgatccaaacagcatt
gctgccagagatggacggatccgtgaaggagaccgcattttgcaaataaatggccaagat
gtccagaatagggaagaggcagtggcgttgctctccagcgaagaatgcaggaaaattgtg
ttgctggtggcgaggccggagatgcagctggaggaagggtggctggatgatgaaaggaat
gaattcttagaggagttaaacttggaaatgttggaagagcagcataatgaagcgatgcag
tacacagccaatgaggtggagcagccaaagaaacatgaagaggaagatggcactacagac
actgcaacctcatcatccaacaatcatgagaaggacagtggggtgggacctacagatgaa
agtcttcgcaacgatgagagctcagagcaagaaaatgcagctgaggagcagaacggtgct
accctgcagagcaaacgggatctgggccacagccaggacactttaggcagtgttgagctc
cagtgcaatgaaagctttgtgtctggggaatacattgaatctgatttcacaggaaaccca
gaggaggaatgtgaaaggtttcgacagctgttggaactgaagtgcaagattcgaaaccat
ggagagtatgatctttattactcaagcagcatgatagaatgcaacagaagagaccaagat
ggagtggagcatgagctgcagctactcaatgaggaactgaggaacattgaacttgaatgc
cagaacattatgcaagctcaccggctccaaaaggtgagagaccagtatggagacatttgg
tctttacatgatgaaagtttcaggaattataacaccagcacagatgtacaaagaggcaaa
ctggatgacatcatggagcaccctgagaagtctgacaaggacagctccagtgcctacaac
actgctgaaagctgcaggagcactccactgactgtggagcgatccccagataactctctc
cagagggtaatcagcataaccaacaggaaaaacctgaggaccacaattgttgctaatcag
tcatcctcaggacaaagcaacagggagacaacctcagccaaaaccaaacccactgagcaa
aacagtgctgctgagaatgcagtgctggcatcagaaagcagcaaattcacagaccaggac
aggcaaggcagcgagcacattccctatttgtctccatatcacagttcttcttacaggtac
gggaacatccctgcccatgcaaagcattatcagagctatatgcagctgatccagcagaag
tctgctgtggagtatgcccagagccagctcagcctggtgagcatgtgcaaagactcgcag
aagtgcgcggagccgaagatggaatggaaagtgaaaataaggagtgatgggacgaggtac
atcacaaagagaccagttcgagacagaatcctgaaggaacgtgccttaaaaattaaagag
gagcgcagtgggatgacgacagatgatgacacgatgagcgagatgaagatgggtcgctac
tggagcaaagaggagcggaagcagcatttggtgcgtgccaaggagcagaggaggcggcgg
gagttcatgatgaggagcaggctggagtgtctcaaggaaagtccacagagcggcagcgag
ggcaaaaaagaaatcaacattattgaactgagtcacaaaaagatgatgaaaaagagaaac
aagaaaatcttggacaactggatgacaatacaagaactgatgacacatggtgctaaatcc
ccagacggcacaagagtgcacaatgcctttttatcagttactactgtatga
DBGET
integrated database retrieval system
