KEGG   Zonotrichia albicollis (white-throated sparrow): 102068692
Entry
102068692         CDS       T07911                                 
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
zab  Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03015  mRNA surveillance pathway
zab05164  Influenza A
Brite
KEGG Orthology (KO) [BR:zab00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102068692 (CPSF4)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    102068692 (CPSF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zab03021]
    102068692 (CPSF4)
   03019 Messenger RNA biogenesis [BR:zab03019]
    102068692 (CPSF4)
Transcription machinery [BR:zab03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     102068692 (CPSF4)
Messenger RNA biogenesis [BR:zab03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     102068692 (CPSF4)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_3 Torus zf-CCCH_2 zf-CCCH_4 zf-C3H1 Nab2-like_zf-CCCH_
Other DBs
NCBI-GeneID: 102068692
NCBI-ProteinID: XP_005487479
Ensembl: ENSZALG00000007983
UniProt: A0A8D2QDR6
LinkDB
Position
Unknown
AA seq 276 aa
MQELIASVDHITFDLELAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPACKFMQGHPKSLESCNLKIT
TVGTEDPGRWSRSPATSVVKKVIMPTDAPKDTWPFSVDSEGAAGRCKGAVTTEERFLPST
MSGAINQVVFLMPLLKELVRGWLLLSNIFVIVPNFF
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcaagagctcatcgccagcgtggatcacatcacgttcgacctggagctggccgtggag
cagcagctgggggcacagccgctccccttccctggcatggacaaatcgggcgcagctgtc
tgtgagttttttttaaaggcggcatgtggaaaaggaggcatgtgcccattcagacacatc
agtggggaaaagacagttgtttgtaaacactggctacgaggactgtgcaaaaagggagac
cagtgcgagttcctgcacgagtatgacatgaccaagatgcctgagtgttacttctactcc
aaatttggggaatgcagtaacaaggaatgtccattcttgcacattgacccggagtcgaag
atcaaagactgtccctggtatgacagaggcttctgcaaacacggtcccctgtgcagacat
cggcacactcggagagtcatttgtgtgaattacctggtgggattctgtccagagggccct
gcctgtaaattcatgcaaggacaccccaagtcattggagtcatgcaatctcaaaataaca
acagtgggaacagaggaccccggccgttggagcaggtcacctgctacaagtgtggtgaaa
aaggtcattatgccaacagatgcaccaaaggacacctggcctttctcagtggacagtgaa
ggagcagcaggaaggtgcaagggagctgttaccactgaggaaaggtttctgcctagcaca
atgtctggagctattaatcaggttgtttttttaatgccattactgaaagaactggtcaga
ggctggctgctgctaagcaacatttttgtaattgttcccaactttttttaa

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