Zonotrichia albicollis (white-throated sparrow): 102068810
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Entry
102068810 CDS
T07911
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102068810 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zab03036
]
102068810 (SIN3A)
Chromosome and associated proteins [BR:
zab03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
102068810 (SIN3A)
REST complex
102068810 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
102068810 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
102068810
NCBI-ProteinID:
XP_026649721
Ensembl:
ENSZALG00000016228
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MPARGDLCSTGVLDQFPCVLSPGFEVLPEHEFSMKRRLDEQESPVYASQQRRITSSTEAF
PHQHRVLAPAPPVYEAVSDTMQSATGIQYSVTPSYQVSAVPQSSGSHGPAIAAVHSGHHH
PAPVQPHGSQVVQSHTHPTPPAVPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDF
LDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTNDMVNVTTPGQ
VHQIPTHGLQPQPQPQPPHPSQPSAQSTPTPAQPAPQPTPAKISKPSQLQAHTPASQQTP
PIPPYASPRSPPVQPHTPVTISLGTTPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKA
FLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSV
LLSKTTAEKVESVRNDHGGTVKKPQLNNKQQRPNQNGCQIRRHSGTGATPPVKKKPKLLG
LKDQSLAEASKHGVGTESLFFEKVRKALRSTEAYENFLRCLVIFNQEVISRAELVQLVSP
FLGKFPELFTWFKNFLGYKESVHMETYPKERATEGIAMEIDYASCKRLGSSYRALPKSYQ
QPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETN
LATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRK
NPSVAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRS
KSLLNEIESIYDERQEQASEDNAGVPTGPHLSLAYEDKQILEDAASLIIHHVKRQTGIQK
EDKYKIKQIMYHFIPDLLFAQRGELSDVEEEEEEEMDVDEATGAAKKHNGVGGSPPKTKL
MFNNTTAQKLRGMDEVYNLFYVNSNWYIFMRLHQILCLRLLRICTQAERQIEEETREREW
EREVLGIKRDKSDSPAIQLRLKEPMDIDVEDYYPAFLDMVRNLLDGNMDSSQYEDSLREM
FTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLYLSENSNGATGGLLASQSSRTLL
EAAYQRKAEQLMSEENCFKLMFIQSRGQVQLTIELLDTEEENSDDPVEAERWSDYVERYV
NSDSTSPELREHLAQKPVFLPRNLRRIRKCQRGREQQEKEGKEGNSKKSMENIESLDKME
CKFKLNSYKMVYVIKSEDYMYRRTALLRAQQSHERVSKRLHQRFQAWVDKWTKEHVPREM
AAETNKWLMGEGLEGLVPCTTTCDTETLHFVSINKYRVKYGTIFKTP
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctcgcggtgatctctgcagcacaggagtgctggatcaatttccctgtgtgctt
tccccaggttttgaggtgcttcccgagcatgagttcagcatgaagcggcgattggacgag
caggagtctcccgtgtatgcgtcgcagcagagacgtatcaccagcagcaccgaggctttc
ccgcaccagcaccgcgtgctcgccccggccccgccggtctatgaggccgtgtccgacacc
atgcagtcagccacgggcatccagtactctgtaactcccagctaccaggtgtcggccgtg
ccgcagagctcgggcagccacgggccggccatcgcggccgtgcacagcggccaccaccac
cccgcgcccgtgcagccccacggcagccaggtggtgcagagccacacacaccccacgccc
ccagccgtgcctgtgcagggccagcagcagttccagaggctcaaggtggaggatgcattg
tcttaccttgaccaggtgaagctacagtttggtagtcagccacaggtctacaatgacttc
ttggatattatgaaggaatttaaatctcaaagcatcgacactccgggcgtgatcagccgt
gtgtcgcagctcttcaagggccacccagacctcatcatgggcttcaacaccttcctgcca
cctggctacaagattgaggtgcagaccaatgacatggtgaacgtgaccaccccggggcag
gttcaccagatccccacgcacgggctgcagccccagccgcagccgcagccgccgcatccg
tcgcagccttcggcgcagtcgaccccgacaccagcacagccggcaccacagcccacacct
gccaaaatcagcaagccatcgcagctgcaggcccacacccctgccagccagcagacgccg
ccgatcccgccgtacgcgtcaccacgctcgccaccggtgcagccgcacacgcccgtgaca
atctccctgggcaccacgccgtccctgcagaacaatcagcccgtggagttcaaccacgcc
atcaactacgtcaacaagatcaaaaaccgcttccagggacagccagacatctacaaagcc
ttcctggagattctccatacgtatcagaaagagcagcgtaatgccaaggaggcaggaggg
aactacacaccagccctgacagagcaggaggtctatgcccaggtggctcgcctcttcaag
aaccaggaggatctgctctcagaattcgggcagttcctgcctgatgccaacagctctgtg
ctgttgagcaagacaactgcagagaaagtggaatcagtcaggaatgaccacgggggcaca
gtgaagaagccacagctcaacaacaagcagcagagacccaaccagaacggctgccagatc
cgacggcactcaggcaccggagccacccctccggtgaagaagaaaccaaagctgcttggt
ttgaaagaccagtctttggcagaagccagcaaacatggtgtggggacagaatctctcttc
ttcgagaaggtccgcaaagctctgcgcagcaccgaggcgtacgagaacttcctgcgctgc
ctggtcatcttcaaccaggaggtgatctccagggctgagctcgtgcagctggtctcccca
ttcctggggaaattcccagaactgttcacttggtttaaaaacttcctgggatataaggag
tctgttcacatggagacgtatcccaaggaacgggctacggaggggattgccatggagatt
gactatgcctcctgcaagaggctgggctccagctacagagccttgcccaagagctaccag
cagcccaagtgcacggggaggactcctctatgtaaagaggttttgaatgacacctgggtc
tctttcccatcctggtctgaagattccacatttgtgagctccaagaagacccaatatgaa
gagcacatctacaggtgtgaggacgagcgttttgagctggatgttgtcttggagaccaac
ctggcaaccatccgcgttctggaggcaatccagaagaagctgtcacgcttgtctgcggag
gagcaggccaaattccggctggacaacaccctggggggcacctcggaggtgatccaccgc
aaggctctccagaggatatacgcggacaaggccgcggacatcatcgatgggctgcgcaag
aacccctctgtggctgtgcccatcgtgctgaaaaggttaaagatgaaagaggaggagtgg
cgagaagcccagagaggatttaataaagtctggcgagagcagaatgagaagtattacctg
aaatccttggaccaccagggcatcaacttcaagcagaatgataccaaggtcctaaggtca
aagagtctcctcaatgagattgaaagcatctatgatgagaggcaagaacaggcttcagaa
gacaatgctggagtccccacaggcccacacctctcactagcctatgaagacaagcagatc
ctggaagatgctgcctctctcatcatccaccacgtgaagcggcagacgggaatccagaag
gaggacaagtacaaaatcaagcagatcatgtatcacttcattccagacctgctgtttgct
cagcgaggtgaactctcagatgtggaggaggaagaagaagaggaaatggatgtggacgaa
gccactggggctgcaaaaaagcacaacggtgttgggggcagccctcccaaaaccaagctg
atgttcaacaacacgacagcccagaagctgcggggcatggatgaggtctacaacctcttc
tacgtgaacagcaactggtacatcttcatgaggctgcaccagatcctgtgcttgcggctg
ctgcggatctgcacccaggccgagcggcagatcgaggaggagacgcgggaacgggagtgg
gagagggaagtgctgggcataaagcgagacaagagcgacagtcctgccatccagctgcga
ctcaaggagcccatggacatcgatgttgaggattattacccggccttcctggacatggtg
cgcaacctgctggacgggaacatggactcgtcgcagtacgaggactcgctgcgcgagatg
ttcaccatccacgcctacatcgccttcaccatggacaagctgatccagagcatcgtcaga
cagctgcagcacattgtgagcgatgagatctgtgtgcaggtgacagacctgtacctgtca
gagaacagcaacggggccaccggagggctcctggcgtcccagtcctcccgcacgctcctg
gaggccgcctaccagcgcaaggccgagcagctcatgtccgaggagaactgcttcaagctg
atgttcattcagagcagaggtcaagttcagttaaccattgagctgctggacacagaagag
gaaaactcggatgaccctgtggaagcagagcgctggtctgactatgtggagcggtacgtc
aactccgactctacctcccccgagctccgcgagcacctggcccagaaacccgtcttcctg
cccaggaatctgaggcggatccgcaagtgtcagcgtggtcgggagcagcaggagaaggaa
gggaaggagggaaacagtaagaagtccatggagaacatagagagcctggacaagatggag
tgtaaattcaagctgaactcctataagatggtgtacgtgatcaaatcagaggattacatg
tacaggaggaccgcgctgctgcgagctcagcagtcccacgaaagggtgagcaagcggctg
caccagcggttccaggcctgggtggacaaatggaccaaggagcacgtgccccgcgaaatg
gcagccgagacaaacaagtggctcatgggtgaaggcttggagggcttggtgccctgcacc
accacctgtgacacagagaccctgcactttgtcagcatcaacaagtaccgcgtcaaatac
ggcacgatattcaagacaccctag
DBGET
integrated database retrieval system
