Zonotrichia albicollis (white-throated sparrow): 102069014
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Entry
102069014 CDS
T07911
Symbol
TNC
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04510
Focal adhesion
zab04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102069014 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102069014 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
zab00536
]
102069014 (TNC)
Glycosaminoglycan binding proteins [BR:
zab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102069014 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
Interfer-bind
EGF
NDNF
hEGF
Big_5
Motif
Other DBs
NCBI-GeneID:
102069014
NCBI-ProteinID:
XP_014127356
Ensembl:
ENSZALG00000008337
LinkDB
All DBs
Position
Unknown
AA seq
1683 aa
AA seq
DB search
MGLPSRVLACAILALLSQQVTGGLIKRIIQPKRETGLNVTLPKDNQPVVFNHVYNIKLPV
GSLCSVDLDSASGDADLKAEIEPVKNYEEHTVNEGNQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLREQCASGAGCCPNSQAAEGRLDTTPYCSGHGNYSIDICGCVCEP
GWKGPNCSQPSCPNDCNDQGKCVDGLCVCFEGYTGPDCSQELCPQGCGAHGRCVGGQCLC
HEGFVGDDCSVPLCPHNCHGRGRCVDSECVCDEGYTGEDCSELICPNDCFDRGRCVNGTC
FCEEGFTGEDCGELTCPNDCHGNGRCENGLCVCHEGFVGDDCSERRCPNDCHNRGLCVNG
QCVCDEGYTGEDCGELRCPNDCHNRGRCVEGRCECDNGFTGEDCGELSCPNDCHGRGRCI
NGRCVCDEGFVGEDCRERSCPNDCNNAGRCVDGRCVCEDGYIGDDCSDVSPPTELTVTNV
TDKTVNLEWKHENLVNEYLVTYVPTSSGGLDMQFTVPGNHTAATIHELEPGVEYFIRVFA
ILKNKKSIPVSARVATYLPAPEGLRFKSVRETSVQVEWDPLNFSFDGWELVFHNMKKDDN
GDITSSLKRPETSYMQPGLAPGQQYNVSIHIVKNNTRGPGLSKVITTKLDAPSQVEARDV
TDTTALITWSKPLAEVEGVELTYGPKDIPGDRTTIDLSEDENQYSIGNLRPHTEYEVTLV
SRRGDMESDPVKEVFVTDLDAPRNLKRVSQTDSSITLEWKNSHANVDNYRIKFAPISGGD
HVEITAPKGSQATTRATLTGLRPGTEYGIGVTAVRNDRESAPATINAGTDLDNPKDLEVS
EPTETTLSLRWRRPVAKFDHYRLVYTSPSGKKGEVEIPVDSSSFLLRGLEPGTEYTISLQ
AEKGRHKSKPTTVKGSTEEEPELGELSVSQPGWDGFQLTWTAADGAFESFVLQVQEAGSP
EESRNVTVPGTLSSVNVTGLKASTPYTITLQGLARGHRSKPISLETTTGEQPGVAELTVS
DITPESFNLSWTASNGDFDTFTIEIIDSNRLLEPMEFNLSGNSRTAHISGLSPSTDFIVY
LSGISRGFRTQAISAAATTEAEPEVDNLLVSDATPDGFRLSWTADEGVFNSFVLKIRDTK
RKSDPLELIVPGHERTQDITGLKEGTEYEIELYGISSGQRSQPVNTVASTVVGSPKGISF
SDITENAATVSWTPPRSRVENFRISYVPVTGGTPNVVTVEGSKTRTKLVKLVPGVDYNVS
VISVKGFEESEPVSGILKTALDSPSGLVVMNITDSEALATWQPAIAAVDNYVVSYSSEKE
PEVTQLVSGNTVEYDLQGLQPATEYRLSVHAQKDTQRSESLSTHFTTGLDAPRDLSATEV
QSEAAVMSWRPPRAPVTGYLLIYESIDGTVKEVILNPETTSYSLTELSPSTQYTVKLQAL
SGALRSKTIQTILTTTGLLYPYPKDCSQALLNGEATSGLYTIYLNGDKAQPLQVFCDMGE
DGGGWIVFLRRQNGKQDFYKNWNTYVAGFGDPNEEFWIGLENLHKITSQGQYELRVDLRD
KGDTAYAVYERFSVGDAKSRYRLRVDGYSGTAGDSMTYHNGRSFSTFDKDHDSAITNCAL
SYKGAFWYKNCHRVNLMGRYGDNNHSQGVNWFHWKGHEYSIQFAEMKLRPSSFRNLEGRR
KRA
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgggactccccagccgggtcttggcctgtgccatcctcgctttgctgtcccagcaggtc
actgggggactcatcaagagaattatccagccgaagagggagactgggctgaacgtgacc
ttgccaaaggataaccagcctgtggttttcaaccatgtctacaacattaagctgcccgtt
ggctccctctgctccgtggacctggactcagcgagcggcgacgccgacctgaaggcggaa
attgagcccgtcaagaactacgaggagcacacggtgaacgagggcaaccagattgtcttc
acacacaggattaacattccccggcgggcctgtggctgtgcagctgccccagacattaag
gatctgctgagcagactggaggagctggaggggctggtctcctccctgcgggagcagtgt
gccagcggggctggatgctgtcccaattcccaggcagcagaaggtcgcctggacaccaca
ccctactgcagcgggcacggcaactacagcatcgacatctgcggctgcgtctgcgagccc
ggctggaagggccccaactgcagccagccctcgtgtcccaacgactgcaacgaccagggc
aagtgcgtggatgggctgtgcgtgtgcttcgagggctacacgggcccagactgcagccag
gagctctgcccccagggctgcggtgcccacgggcgctgcgtgggtgggcagtgcctgtgc
catgaaggttttgtgggtgacgactgcagcgtgcccctgtgcccccacaactgccacggc
cgcgggcgctgtgtggacagcgagtgtgtgtgtgatgagggctacactggtgaggactgc
agcgagctcatctgccccaacgactgcttcgaccgcgggcgctgcgtgaacggcacctgc
ttctgcgaggagggcttcaccggcgaggactgcggcgagctcacctgccccaacgactgc
cacggcaacgggcgctgcgagaacgggctgtgcgtgtgccacgagggctttgtgggtgat
gactgcagcgagaggaggtgccccaacgactgccacaaccgcgggctgtgcgtcaacggg
cagtgcgtgtgcgatgaggggtacacgggcgaggactgcggggagctgcgctgccccaat
gactgccacaaccgcgggcgctgcgtggaggggcgctgtgagtgtgacaatggcttcaca
ggggaagactgtggcgagctctcctgccccaacgactgccacgggcgtgggcgctgcatc
aacgggcgctgcgtgtgcgatgagggcttcgtgggcgaggattgccgggagcgctcctgc
cccaacgactgcaacaacgcagggcgctgcgtggacgggcgctgtgtctgcgaggatggg
tacatcggggatgactgctctgatgtgtctcctccaactgagctgactgtgaccaacgtg
acagacaaaactgtcaatctggagtggaagcacgagaacctcgtcaacgagtacctcgtc
acctacgtccccaccagcagcgggggcttggacatgcagttcaccgtgccaggaaaccac
acagctgccaccatccacgagctggagccaggggtggagtacttcatccgtgtctttgca
atcctgaaaaacaagaagagtattccagtcagcgccagggtagccacatatctgcctgct
ccagaaggtctgaggttcaaatctgttcgggaaacgtctgtccaggtggagtgggaccct
ctgaacttttcttttgatggctgggagctggtcttccataatatgaaaaaggatgataat
ggtgacataaccagcagcttgaaaaggccagagacatcctacatgcagccaggtttggcc
cctgggcagcagtacaatgtgtccatccatatcgtgaagaacaacaccagaggaccaggc
ctatccaaagtcatcaccacaaagcttgatgcccccagccaggtggaggccagagatgtc
actgacaccacagctctcatcacatggtccaaacccttggctgaagttgaaggtgtagag
ctcacttatggccccaaggacattccaggggacaggacaaccattgatctctctgaagat
gagaaccaatactccattggcaacctgaggccgcacacagagtacgaggtgacgctggtg
tctcgtcgaggggacatggagagcgaccctgtgaaggaagtctttgtcacagacctggat
gctcctaggaacctgaagagggtgtcccagactgacagcagcatcaccctggagtggaag
aacagccacgccaacgtcgataattaccgaatcaagttcgctcccatctctggtggggac
cacgtggagatcacagcgcccaagggcagccaggccacaaccagagctacactcacaggt
ttgaggcctggaactgaatatggcattggagtgacagcagtgaggaatgacagggaaagt
gctcctgctaccatcaacgctggcactgaccttgataaccccaaggacctggaagtcagt
gagcccactgagaccaccctgtccctgcgctggagaaggcccgtggccaagtttgaccac
taccgcctggtttacaccagtccctcggggaagaagggcgaggtggagatcccagtggac
agcagctccttcctgctgcgggggctggagccaggcactgagtacaccatcagcctgcag
gcagagaagggacggcacaagagcaaacccaccactgtcaagggctccacggaggaggag
cccgagctgggggagctgtcagtgtcacagcctggctgggatggtttccagctcacctgg
acagcagcagatggggcctttgagagctttgtgctgcaggtgcaggaggctggcagcccc
gaggagagccgcaatgtcacagtgccggggacactgagctctgtcaatgtcaccggcctc
aaggccagcactccttacaccatcaccctgcaggggctcgctcggggccacaggagcaag
cccatttctcttgagaccaccacaggagagcagcccggcgttgctgagctcacggtgtcc
gacattacccctgaaagcttcaacctctcctggacagcctccaacggcgacttcgacacc
tttaccattgaaattattgattctaacaggttgctggagcccatggagttcaacctgtca
ggcaactcaaggactgctcatatctcagggctttctcccagcactgatttcattgtctac
ctctctgggatctctcgcgggttccgcacacaggcaatcagtgctgcagctaccacagaa
gcagaacccgaggtcgacaacctcctggtttcagacgcaaccccagatggattccgtctc
tcctggactgcagatgaaggggttttcaacagctttgttctaaaaatcagggacaccaaa
aggaaatctgaccccctggagctgatagtgccaggccatgagcgcacccaggatataaca
gggctgaaagagggcactgaatatgagattgagctctatggaattagcagtggacaacgt
tcccagcctgtaaacacagtagcatccacagtggttggctctcccaaggggatttccttc
tctgacatcacagaaaatgctgccacagtcagctggaccccccctcgctcccgcgtggaa
aatttccggatctcctacgtccctgtcacaggaggtactccaaatgttgtcacagttgag
gggagcaagacaaggaccaagctggtgaagctggtcccaggtgtggactacaacgtcagc
gtcatctctgtgaagggctttgaagaaagcgagcccgtctctggcatcctgaaaacagct
ctggacagcccatcaggcctggtagtgatgaacatcacagattctgaggctctggcaacc
tggcagccagcaattgctgctgtggataactacgtggtgtcctactcttctgagaaagag
ccagaggtgacccagctggtgtcagggaacacggtggagtacgacctgcaggggctgcag
cctgccaccgagtacaggctgagcgtccacgcgcagaaggacacgcagaggagcgagagc
ctctccacgcacttcaccacagggctggatgctccaagggatttgagtgccactgaggtg
cagtcagaagcagctgtgatgagctggaggcctccccgtgctccagtcactggatatctc
ctgatctatgaatccatcgatggcacagtcaaggaagtcatcctaaaccccgagacaacc
tcctacagcctgacagagctgagcccctccactcagtacacggtgaaactgcaggccctg
agtggggccctgaggagcaaaaccatccagaccatactcaccaccactgggctcctctat
ccctaccccaaggactgctcccaggccctgctgaatggagaagccacctctgggctctac
acaatttacctgaacggggacaaggctcagcctctgcaggtgttctgtgacatgggcgag
gacggcggcggctggatcgtgttcctgaggcgtcagaatggaaagcaagatttctacaag
aactggaatacttatgtggcagggtttggagatcctaatgaagaattctggataggtctg
gagaacctgcacaaaatcacttctcagggccagtacgagctgcgggtggacctgagggac
aagggggacacggcctacgccgtgtacgagcgcttcagcgtgggcgacgccaagagccgc
taccgcctgcgcgtggatggctacagcggcactgcaggtgactccatgacctaccacaat
ggaaggtccttctccacctttgacaaggaccacgactctgccatcaccaactgtgctctg
tcatacaaaggagctttctggtacaagaactgccaccgagtcaacctgatgggcagatat
ggtgacaacaaccacagtcagggcgtcaactggttccactggaagggccacgagtattcc
atccagtttgcagagatgaagctgagaccctccagcttcaggaacctggaggggcggcgg
aagcgagcgtag
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