Zonotrichia albicollis (white-throated sparrow): 102069967
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Entry
102069967 CDS
T07911
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zab03019
]
102069967 (PTBP1)
03041 Spliceosome [BR:
zab03041
]
102069967 (PTBP1)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
102069967 (PTBP1)
Spliceosome [BR:
zab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102069967 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
102069967
NCBI-ProteinID:
XP_005495811
Ensembl:
ENSZALG00000017035
UniProt:
A0A8D2QK77
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MDGIVQDITVGTKRAAEELFSPCVTTNGPFIMSSNSPSAANGNDSKKFKGDNRSAGIPSR
VIHVRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEETANTMVNYYTTVTP
VLRSQPIYIQFSNHKELKTDNSPNQARAQAALQAVTQVQAGAVALAATAAAVDAGMAITG
QSPVLRIIVENLFYPVTLDVLHQIFSKYGTVLKIITFTKNHQFQALLQYADPMSAQHAKL
SLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPTLDQTMAAAFGA
PGIISPPYAGAGFPPTFAIPQATGLTVPSVPGALAPLAIPAAAAAAAAGRIAIPGLSGTG
HSVLLVSNLIPERVTPQCLFILFGVYGDVQRVKILFNKKDNALVQMADGNQAQLAMSHLN
GQKLHGKPIRITLSKHQTVQLPRENQEDHGLTKDYGTSPLHRFKKPGSKNFQNIFPPSAT
LHLSNIPPSVTEEDLKLLFSSNGGMVKGFKFFQKDRKMALIQMGSVEEAIQSLIDLHNHD
LGENHHLRVSFSKSTI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtccaagatataacagttggtacaaagcgggcagctgaggagcttttc
tctccttgtgttactactaacggaccctttatcatgagcagcaactctccttctgcagct
aatggaaacgacagcaaaaaatttaaaggtgataacagaagtgccgggatcccatcccga
gtaatccacgtccgcaagctccccagtgacgtcacggaggcagaggtcatttctctgggc
ttaccctttggcaaggtcaccaatcttctgatgttgaaaggaaaaaaccaggctttcata
gagatgaacacagaggagacagccaacaccatggtgaactactacaccacagtcactccg
gtgctccggagccagcccatctacatccagttctccaaccacaaggagctgaagacagac
aactctccaaaccaagcacgtgcccaagcagctctgcaagccgtgacccaggtgcaggct
ggggctgtggcgctggccgccacggctgcggccgtcgatgcaggcatggcaatcactggc
cagagccctgtcctgaggatcattgtggagaatctcttctaccctgtcactctggatgtt
ctgcaccagatcttttccaaatatggtacagtcttgaaaatcatcacattcacgaagaac
caccagtttcaggccctgttgcaatatgctgaccccatgagtgctcagcatgccaaactg
tctctggatggccagaacatctacaacgcctgctgcacgctgcgcatcgacttctccaag
ctcaccagcctcaatgtaaagtacaacaatgacaagagcagggactacacccgccctgac
ctgccctctggggacagccagcccaccctggaccagaccatggcagctgcttttggtgcc
ccaggaataatctctcctccatatgctggagctggcttccctcctacttttgccattcct
caggctacaggcctgacagttccaagtgttcctggagcacttgctcctttggctattcca
gcagcagctgcggcggctgcagcagggcggattgccattcccggcctgtctgggacaggg
cactccgtgctgctggttagcaatctgatcccagagagagttacaccccaatgcctcttt
attcttttcggagtctatggtgatgtgcagagggtgaagattttatttaataagaaagat
aatgccctggttcagatggccgatgggaatcaggcccagcttgccatgagccacttgaat
gggcagaagctccacgggaagcccatccgtatcacgctgtccaagcaccagacagtgcag
ctgccccgcgagaaccaggaggaccacggcctcaccaaggactatggcacttctcctcta
catcgtttcaagaaaccaggctccaaaaatttccagaacatctttcctccttctgccact
cttcatctgtccaatattccaccttcagtaactgaagaagatcttaagttgttattttca
agcaatggtgggatggtcaaaggattcaaatttttccagaaggaccgtaaaatggctctg
atccagatgggctctgtggaagaagccattcagtccctcattgacctccacaatcatgac
ctgggggagaaccatcacctgcgtgtgtccttctccaagtccaccatttag
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