KEGG   Zonotrichia albicollis (white-throated sparrow): 102070189
Entry
102070189         CDS       T07911                                 
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
zab  Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04115  p53 signaling pathway
zab04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:zab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102070189 (COP1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    102070189 (COP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zab04121]
    102070189 (COP1)
Enzymes [BR:zab01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102070189 (COP1)
Ubiquitin system [BR:zab04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102070189 (COP1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     102070189 (COP1)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EIPR1 zf-C3HC4_2 WDR55 Beta-prop_RIG_2nd EIF3I Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 zf-RING_2 zf-RING_UBOX Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_DCAF4 zf-C3HC4_3 zf-RING_5 Beta-prop_WDR90_POC16_2nd zf-C3HC4_4 WD40_RFWD3 RING_XB3-XBAT31 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD40_like Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st zf-rbx1 zf-RING_10 zf_C2H2_10 zf-RING_11 Sina_RING
Other DBs
NCBI-GeneID: 102070189
NCBI-ProteinID: XP_014124771
Ensembl: ENSZALG00000008638
LinkDB
Position
Unknown
AA seq 608 aa
MNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHL
YPNFLVNELILKQKQRSEEKRLKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLE
LLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLY
SPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAH
FEDLEQCYFSTRMTRVSDDSRTTSQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSI
VSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHK
NLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWST
NLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVS
YAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNS
LYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQG
TIKVLELV
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgaactcctacgaggacaagagcaacgacttcgtgtgccccatctgttttgatatgatt
gaagaggcctacatgacgaaatgtggacacagcttctgctataaatgtattcaccagagc
ctggaggacaataacagatgtcccaaatgcaactatgttgtggacaacatagatcatctt
tatcccaacttcttagtgaatgaattaattcttaaacagaagcaaagatctgaggagaaa
agactcaaactggaccattcagtgagtagcaccaatggccacaggtggcagataattcaa
gatttgttgggaactgatcaagacaatcttgacttagccaatgtcaacctgatgctggag
ctgctggtgcaaaagaagaagcagttggaagcagagtcccatgctgcccaattgcagatc
cttatggaattccttaaagttgccaggagaaacaaacgagagcaattggagcagatccag
aaggagctaagtgttctggaagaagatattaaacgtgtagaggagatgagtggcctgtac
tccccagtcagtgaggacagcacagtgccacagtttgaggctccctcaccttcacacagt
agtattattgactccaccgagtatagccagcctccaggcttcagtggcagttctcagacc
aaaaagcagccgtggtataacagcacgctggcgtcgcggcgcaagcgcctcacagcccat
tttgaggacctggagcagtgctatttctccaccaggatgactcgtgtctcggatgacagc
agaaccaccagccagctggatgagtttcaggagtgtctgtccaagttcacgcgctacaat
tctgtccgaccgctggcaacgctgtcctacgccagtgacctctacaatggctccagcata
gtgtccagtattgagttcgaccgagactgtgactactttgccatcgctggagtgacaaag
aagattaaagtctatgagtatggtacagtcattcaggatgcagtggatattcactaccct
gagaatgaaatgacctgtaattccaaaatcagctgtatcagctggagtagttaccacaag
aacctgctagccagcagtgactatgagggcaccgtcatcctttgggatggattcacagga
cagagatccaaggtctaccaggagcatgagaaaaggtgctggagtgttgactttaacttg
atggaccctaagctattggcttcaggctctgatgatgccaaagtgaaactgtggtctacc
aacttggacaactcagttgcaagcattgaggccaaggctaacgtgtgttgtgtcaaattc
agcccatcttctaggtatcacctagcttttggctgtgcagatcactgtgttcactactat
gacctccgcaacactaagcagcccatcatggtgttcaaggggcaccgcaaggccgtctcc
tatgcaaagttcgtcagcggcgaagaaatcgtctctgcgtcaacagacagtcagctgaag
ctgtggaacgtagggaagcctcactgcctgcgctccttcaagggtcacatcaacgagaag
aactttgtggggctggcgtccaacggagactacattgcctgtggaagtgaaaataattcc
ctttacttatactataagggcctctcaaagacactgctgacattcaagtttgatacagtc
aaaagtgtcctggacaaggatcggaaagaagacgacaccaatgagtttgtgagcgccgtg
tgctggagggcacttccagatggggagtccaatgtgcttattgctgctaacagtcagggt
acaattaaggtactggagctggtatga

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