Zonotrichia albicollis (white-throated sparrow): 102070493
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Entry
102070493 CDS
T07911
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03250
Viral life cycle - HIV-1
zab04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102070493 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102070493 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zab03400
]
102070493 (SAMHD1)
DNA repair and recombination proteins [BR:
zab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102070493 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
PDEase_I
HD_assoc_2
HARE-HTH
Pdc1_Ge1
Motif
Other DBs
NCBI-GeneID:
102070493
NCBI-ProteinID:
XP_014128365
Ensembl:
ENSZALG00000016043
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MLLDLPACAPELIRVCCPAERLEVLACLPQMQQQHMEVMKVFNDPIHGHIELHPLLVRII
DTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSLGVGYLAGCLVRALKERQPDLGITERDI
LCVEIAGLCHDLGHGPFSHMFDGRFIPLTRPDLNWKHETSSVQMFEHLVTSNKLEEVMRS
YGLVLEEDLLFIKEQIGGPIDETACVKSWPYRGRPKEKSFLYEIVANKKNGIDVDKWDYF
ARDCHHLGIPNNFDYQRLLIFTRVCEVGNQKHICPRDKEVGNLYEMFHTRNCLHRRAYQH
KTGNIIEIMITEAFQKADKYFEIRGSEGKVYRISTAMEDMEAYTKLTDYVYLEILHSSNP
ELEEAREILRKIERRELYKFLGETRPESKKEIIKSNSLAESIANSKPEKDPPDVELKAEN
FIVDVISMDYGMKEQNPIDKVHFYCKADPSKAVKISKEQVSKLLPIIFMEQVVRVYYKSQ
DPHIISAAKQYFIQWCIQNDFTKPQDGDVVAPHLTPMKETWNKMTDDEHRRASEPSCKQR
LSFDE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggacctgccggcctgcgcccccgagctcatccgcgtctgctgcccagctgag
cgactggaagtgctggcgtgcctgccacagatgcaacagcagcacatggaggtgatgaag
gtttttaacgatcctatccatgggcacattgagttgcatcccctgctggttcggatcatc
gacacccctcagttccagcgcctgcgctacatcaagcagctgggcgggacctacttcgtg
tttccaggggcctctcacaaccgctttgagcactccctgggggttggctaccttgcagga
tgtctggttcgtgcgctgaaggagagacaaccagacctgggtataactgagcgagacatc
ctctgtgtagaaattgctgggctttgtcatgatttgggtcatgggccattttcacacatg
tttgatggaagatttattccactcactcgtccagatttgaattggaagcatgaaacttct
tctgttcaaatgtttgagcacttggtcacttccaataaactagaagaagtcatgaggtcc
tatggtcttgtcctggaagaagatctgttgttcatcaaggagcaaataggagggcccata
gatgaaactgcctgtgtgaaatcgtggccctaccgtggtcgaccaaaggagaaaagtttc
ctctatgagattgtagctaataagaaaaatggcattgacgttgacaagtgggattatttt
gcaagggattgccatcacctgggaatccccaataactttgactatcagcgattgcttatc
ttcacccgggtgtgtgaagtggggaaccagaagcacatctgcccccgtgacaaggaagtt
ggaaatctgtacgagatgttccacacccggaattgcctgcaccggagagcataccagcat
aagactggcaacatcattgaaataatgataacagaagcctttcaaaaagcagacaaatat
tttgaaataagaggctctgaaggaaaagtgtatcggatttctacagccatggaagacatg
gaagcctacactaaactaactgactatgtctacctggaaattctgcactcaagtaatccg
gaactggaggaggcacgagaaattttgcgtaaaatagaacgacgtgaattatacaagttt
ttaggagagactcgacctgaatcaaagaaggaaattataaagagtaacagcctggcagaa
agcattgctaattccaagccagagaaggaccctccagatgtggagctaaaggctgagaat
ttcatagttgatgttatcagcatggattatggaatgaaggaacagaatccaattgataag
gttcacttctattgcaaggctgatccttccaaggcagttaaaatcagtaaagaacaggtt
tcaaagcttttacccataatatttatggagcaggttgtccgggtttattacaaaagtcag
gacccacatattatttcagctgcaaaacagtactttattcagtggtgcatacagaatgat
ttcaccaaaccacaggatggtgatgttgttgctcctcatctaactccaatgaaggaaacc
tggaataagatgacagatgatgaacacaggagagcctcagaacccagctgcaaacaaagg
ctttcttttgatgagtaa
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integrated database retrieval system
