Zonotrichia albicollis (white-throated sparrow): 102070616
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Entry
102070616 CDS
T07911
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zab03021
]
102070616 (CHD1)
03036 Chromosome and associated proteins [BR:
zab03036
]
102070616 (CHD1)
Transcription machinery [BR:
zab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
102070616 (CHD1)
Chromosome and associated proteins [BR:
zab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
102070616 (CHD1)
SLIK complex
102070616 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
102070616
NCBI-ProteinID:
XP_005495403
Ensembl:
ENSZALG00000003001
UniProt:
A0A8D2M4B9
LinkDB
All DBs
Position
Unknown
AA seq
1808 aa
AA seq
DB search
MNGHSDEESVGNSSGESSRSDDDSGSASASGSGSSSGSSSDGSSSQSGSSDSDSGSESGT
RSESESDTSREKKQIQSKPTKVDGSEFWKSSPSILAVQRSGVLKKQQQQKAASSDSVSEE
DSSSSEDSADDSSSETKKKTHKDEDWQMSGSGSMSGTGSDSESEEDREKSSCEESESDYE
PKNKVKSRKPPTRIKPKSGKKNAGPKKRQLDSSEDDDEEDDDDYDKRGSRRQATVNISYK
EAEETKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRVGRKGATGAATTIYAVEADGDP
NAGFEKSKEPAEVQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWL
KNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSW
EDGALIAKKFQARIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESLELRD
YQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLT
SWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFL
GGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPE
KFSSWEDFEEEHGKGRECGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQK
QYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHL
IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELR
KQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQ
KKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKE
ELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVAN
FSNMDEDDIELEPERNSRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQISFN
GSEGRRNRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGG
PLERLDAVARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGQERAGGRLGKVKGPTFR
ISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLI
GIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQ
RLAGAGNSKRRKTRTKKNKVLKAAKLKEEIKSDSSPQPSEKSDEDDDENNKDEIVSVKHL
HKKFKAEKENEEKPEPDTGIKKEAEEKRETKEKENKRDLKRDKKEKEDKKELKEKDIKEK
RENKVKESTQKEKEVKEEKVNEIKSENKEKTKKIPLLDTPVHITASSEPVPISEESEELD
QKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTSPEQ
IKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHSDQNISGHVNTHVIRNPDVE
RLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDAYKKNDSRKRPYSAFSNGKDHRDW
DHYKQDSRYYSDSKHRKLDDYRSRDHRSSLEGSLKDSRVHLDHRSHSDHRTHSDHRSSSE
YSHHKSPRDYRYHSDWQMDHRASGSAPRSPLDQRSAYGSRSPLGHRSPFEHSSDHKSTPE
HTWSSRKT
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagtgtaggaaacagcagtggagagtcaagccgatca
gatgatgattctgggtcagcatcagcttctggatctggttcaagttctggaagcagtagt
gacggaagcagcagccagtcaggcagcagtgactctgactctggttcagagtcagggact
cggtcagaatcagagtctgacacatctagagagaagaaacaaattcaatctaaaccaaca
aaagttgacggatctgagttttggaagtctagtccaagtatacttgccgtgcaaagatca
ggagtactcaagaagcagcaacaacaaaaggcagcctcatcagacagtgtttcagaagag
gactcctcaagtagtgaagattcagcagatgactcatccagtgaaaccaagaaaaaaaca
cataaagatgaagactggcaaatgtcaggatcagggtcaatgtcgggaacaggttcagat
tctgaatcagaggaagacagagagaaaagcagctgtgaggagagtgaatctgactatgag
ccgaaaaacaaggtcaaaagccgtaaacctccaaccagaattaagccaaaaagcgggaag
aagaatgcaggaccaaaaaagaggcaacttgattcttcagaggatgatgatgaggaggat
gatgatgattatgataagaggggatctcgtcgtcaggcgacagtcaacattagttacaag
gaagctgaagaaaccaagacagattctgatgatttgctagaagtttgtggagaagatgtt
ccacaacctgaagaagatgaatttgaaactatagagaaatttatggatagtcgagttggc
cgtaaaggagccacaggtgctgcaaccacaatatatgcagttgaggccgatggtgatcca
aatgctgggtttgaaaaatcaaaggagccggcagaagtacagtatctcattaaatggaaa
ggttggtcacacatccacaacacttgggaaactgaggaaacactgaagcaacaaaatgtt
aaaggaatgaagaaactggacaattacaagaaaaaggatcaggaaacaaaacgatggctg
aaaaatgcttctccagaagatgtggaatattacaactgccagcaggagcttacagatgat
ctacataaacaataccagatagtggaaagaataattgctcattcaaatcagaaatcagct
gctggttatccagactactattgtaagtggcagggtctaccttattctgaatgtagctgg
gaagatggagctctcattgccaaaaagtttcaggcacgcattgatgagtacttcagcaga
aatcaatccaagaccactccctttaaagattgcaaggttctaaaacaaaggccacgattc
gttgcactaaaaaaacaaccatcttatattggaggacacgaaagtttagagttaagagat
tatcagttaaatgggttgaattggcttgctcactcatggtgcaaagggaatagctgtatt
cttgcagatgaaatgggtctaggtaaaacaatacaaacaatttcttttctgaactacctg
tttcacgaacatcaattgtatgggcctttcttgttggttgtgccactttctaccttgacg
tcttggcaaagagagattcaaacctgggctcctcagatgaatgctgtagtttacttagga
gatataactagtagaaatatgataagaactcatgaatggatgcatccacagaccaaacga
ttgaaatttaacatactcttaacaacatatgaaattttgctaaaggataagtcattcctt
ggtggtctgaattgggcattcataggagttgacgaagctcatcgtttaaaaaatgatgac
tctcttctgtacaaaactttaatagactttaagtctaaccatcgtcttcttattactgga
acacctctgcaaaactctctcaaagagctttggtctttactccacttcatcatgccagaa
aagttttcttcatgggaagattttgaagaggagcatggcaaagggagagaatgtggttat
gcaagtcttcacaaagaacttgaaccatttctgctgagaagagttaaaaaagatgtagaa
aagtccttacctgctaaagttgagcaaattctgaggatggaaatgagtgcattgcagaag
caatactacaagtggattttaaccagaaattataaagcccttagcaaaggttcaaaaggc
agtacctcaggctttttgaacatcatgatggaactcaagaagtgttgcaaccattgctac
ctcattaaaccaccagatgataatgaattctataataaacaggaggccttacagcattta
atacgtagcagtgggaagctaatccttcttgacaagctactgattcgtctgcgagaacgt
ggcaacagagtcctgattttttcacagatggtaaggatgctggacatcctggcagaatat
ctgaaatatcgtcagtttccatttcagagacttgatggatcaataaaaggggaattgagg
aaacaagcactggatcattttaatgcagaaggatcagaggacttctgctttttactgtct
accagagctggaggattaggtatcaacttggcatctgctgatacagtggttatatttgat
tctgactggaatccacagaacgatctgcaagcacaggctagagcgcatagaattggacag
aagaaacaggttaatatttatcgactagtcacaaaaggatcagtagaagaagatattctt
gaacgagccaagaaaaaaatggtgttagatcatttagtaattcagagaatggacactaca
gggaaaactgtgttacatacaggctctactccttcaagctcaacaccttttaataaggag
gagttgtcagcaattttaaagtttggtgctgaggaactttttaaagaacctgaaggggaa
gaacaggagcctcaagaaatggatatagatgaaatattgaagagggctgaaactcgggaa
aatgagccaggtccattaactgtaggagatgagttgctttcgcagttcaaggtggccaac
ttctccaatatggatgaagatgatattgagttggagccagaaagaaattcaagaaattgg
gaagaaatcattccggaggtccagaggcgaagaatagaagaggaggaaagacaaaaagaa
cttgaagaaatatacatgcttccaagaatgagaaactgtgcaaaacagattagcttcaat
ggcagtgaagggagacgcaataggagtagaagatactctggatctgatagtgactccatc
tcagaaagaaaaaggccaaaaaaacgtggaagaccacgaactattcctcgagaaaatatt
aaaggatttagtgatgcagagataaggcggtttatcaagagttacaagaaatttggtggc
cctcttgagaggttagatgctgtagctagagatgctgagctagttgataaatcagagaca
gacctcagacgtttgggagagcttgtacataatggatgcattaaagccttaaaggacaat
tcatctggacaagaaagagcaggaggtagacttgggaaggttaaaggcccaacattccga
atctcaggagtgcaagtaaatgcaaagttagtcatctctcatgaagaagagttggcacca
ttgcacaaatccattccttcagatccagaagaaagaaaaagatatgtcatcccatgccac
actaaggcggctcattttgatatagactggggtaaggaagatgactccaatttgttgata
ggcatctatgaatatggttatggcagctgggaaatgataaaaatggatcctgatctcagt
ttgacacagaagattttgcctgatgatccagataaaaaaccccaggcaaagcagttacag
acccgtgcagactacctcattaaattactgaataaagaccttgcgaggaaggaagcacaa
aggcttgctggagcaggcaattcaaagaggaggaaaacaagaactaagaagaataaggtg
ctaaaggctgcaaaattaaaagaagaaataaaaagtgattcttcaccacaaccgtcagaa
aaatctgatgaagatgatgatgagaataacaaggatgagattgtttcagtgaaacatctg
cataaaaaatttaaagcagaaaaagaaaatgaagaaaagcctgagccagatactggtata
aagaaggaggctgaagaaaagagagagacaaaagaaaaggaaaataagagggatttgaaa
agggacaaaaaagaaaaagaggataagaaagaattaaaagaaaaggatattaaagaaaag
agagaaaacaaagtaaaagaatccacacagaaagaaaaagaagtaaaggaagagaaggta
aatgaaatcaaatccgaaaataaggaaaaaactaaaaaaattccattgctggatactcca
gttcatattactgcatctagtgaaccagttccaatatcagaagaatctgaagagctagat
cagaaaactttcagtgtgtgcaaagaaagaatgagacctgtcaaggcagcattgaaacag
cttgatcgaccagagaaaggcctttctgaaagagaacagctggaacatactagacagtgt
cttatcaaaattggggatcatattactgagtgtctaaaggagtacacaagtcccgaacaa
attaaacagtggagaaaaaatttgtggatttttgtatctaagtttacagaattcgatgcc
agaaagctgcacaaactgtataaacatgcaatcaaaaaacgtcaagagtctcagcaacac
agcgatcagaatattagcggtcatgtgaatacacatgtaattagaaatccagatgtggaa
aggttgaaggagaatacaaaccatgatgacagtagcagggacagctattcctctgacaga
catctgtcacaataccatgatcatcataaggacaggcatcagggagatgcttacaagaaa
aatgattccaggaaaaggccttattcagccttcagcaatggaaaagatcacagagactgg
gatcactacaaacaagacagcaggtactacagtgatagtaaacacaggaagttagatgac
tacaggagcagagaccacaggtcaagcctggaagggagtctaaaagacagccgggttcat
ttggatcaccgttcccattcagaccacaggacacattcagatcaccgttcctcttcagag
tacagccatcataaatctcctagagattataggtaccactcagactggcaaatggaccat
agagcttcaggtagtgccccaaggtcacccctggatcagagatctgcttatggttcaaga
tctcccctcggtcacagatctccgtttgaacattcatcagatcacaaaagtacacctgaa
catacatggagtagtcggaaaacataa
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integrated database retrieval system
