KEGG   Zonotrichia albicollis (white-throated sparrow): 102070731
Entry
102070731         CDS       T07911                                 
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
zab  Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102070731 (PRPF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zab03041]
    102070731 (PRPF4)
Spliceosome [BR:zab03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    102070731 (PRPF4)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_Gbeta WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 PRP4 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_Aladin WDR90_beta-prop_4th NBCH_WD40 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_IFT140_1st WD_LRWD1 Beta-prop_Vps41 WD40_like Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 102070731
NCBI-ProteinID: XP_014125962
Ensembl: ENSZALG00000010493
LinkDB
Position
Unknown
AA seq 529 aa
MATARAPAARGGARPPEPPKAKAAEEAEAPPAKRAPIFYGSLEEKERERLAKGEAGLLGK
EGMKAAMEAGNINISTGEVFDLEDHMSERQAEVLAEFERRKRARQINVSTDDCEVKACLR
ALGEPITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSKEEYQQTWYHEGPRS
LKTARLWLANYSLPRAAKRLEEARLLKEIPEATRTSQRQELHKSLRSLNNFCSQIGDDRP
LSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATVSLEKKD
VSLASCAADGSVKLWNLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLE
AQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGI
NFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVRFEPNHGNFLLTGAYDNT
AKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq 1590 nt   +upstreamnt  +downstreamnt
atggccaccgcgcgggcaccggcggctcgtggcggggcccggccccctgagccccccaag
gccaaggcagccgaggaggccgaggctcccccggccaagcgggcgcccattttctacggg
agcctggaggagaaggagcgcgagcgcctggccaagggcgaggccgggctgctgggcaag
gagggcatgaaggcagccatggaggctggcaacatcaacatcagcactggggaggtgttt
gacctcgaggaccacatgagcgagcggcaggccgaggtgctggcggagttcgagcggcgc
aagcgcgcgcggcagatcaacgtgtccacggacgactgcgaggtcaaggcgtgcctgagg
gccctgggggagcccatcacgctcttcggagagggccctgcggagcgcagggagaggtta
aggaacatcctctcagtggtcggcacagatgcattaaagaagaccaggaaagatgatgac
aggtccaaaaagtccaaagaagagtatcagcaaacctggtaccacgagggcccacggagt
ctgaaaacagccaggctgtggctggccaactactccctgcccagggcagcaaagaggctg
gaggaggctcggctgctcaaggagatccccgaggccaccaggacatcccagaggcaggag
ctgcacaaatccctgaggtccttgaataacttctgcagccagattggggacgatcgcccg
ctgtcctactgccacttcagccccaactccaaactgctggccacagcctgctggagtggg
ctgtgcaagctctggtctgtgcctgactgcaacctggttcacaccttacgaggacacagc
accaacgtgggggccatcgtgttccaccccaaggccacggtgtccctggagaagaaggac
gtgagcctggcctcgtgtgcagctgatggctctgtcaaactctggaacctggaaagtgat
gagcccgtggctgacattgagggacacagcatgagagtggcccgagtgatgtggcacccc
tcagggaggttcctgggcaccacctgctacgaccactcgtggcgcctgtgggacctggag
gcgcaggaggagatcctgcaccaggaggggcacagcaagggcgtctacgacatcgccttc
cacaccgacggctccctggctggcaccggaggcctggatgcctttggccgggtgtgggac
ctgcgcactggccgctgcatcatgttcctggaagggcacctgaaggagatctatggcatc
aacttctccccaaacgggtaccacgtggccacgggcagtggggacaacacctgcaaggtg
tgggacctgcggcagaggaaatgcatttacaccatccctgcccaccagaacctggtcacc
ggcgtcaggtttgaacccaaccacgggaatttcctgctcacgggcgcctacgacaacacg
gccaagatctggacccaccccggctggtcccccctgaagacactggcagggcacgagggg
aaggtgatgggcctggacatctccctggatgggcagctcattgccacctgctcctatgac
agaaccttcaagctctggacagctgagtag

DBGET integrated database retrieval system