Zonotrichia albicollis (white-throated sparrow): 102070964
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Entry
102070964 CDS
T07911
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zab03021
]
102070964 (SCAF4)
03041 Spliceosome [BR:
zab03041
]
102070964 (SCAF4)
Transcription machinery [BR:
zab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102070964 (SCAF4)
Spliceosome [BR:
zab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
102070964 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102070964
NCBI-ProteinID:
XP_014127041
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MEAVNAFNQELFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSATAPMAENATNNEGSPPPPAKVPSEPPPVTPNSVPAVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPQKPQSPVIDNTVMAQVQAITAQLKTTAAQP
PEQKAAFTAPEQKTSFDKKLLDRFDYDDEPEAVEDSKKEDSAPSPAVSQPALTSLSFSAQ
AGWCSMPGGFPGEGMQQPVFPQLPNMDPFQQRMMGMQQDPMRHQVPLPPNGQMPGFGLLP
TPQFPPMAQPVMPPAAPVQPTFQSPFPVQAEPHLQKPHQQDMEVEQPPIQEGKRHVSDSR
KSRSRSASRSPKRRRSQSGSRSRRSRHRRSRSRSRERRRRSPKSRSQERREREREKERRS
KGLPQIKAETVSVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVH
RQDANRALQKLSRGNFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPEDL
ESFCEGGMLDNETLSPEWKGIPKKSENEVAQNGGAEAAHNEPVSPIPKALPVPIPVPMPA
PITVPPPQVPPHPSGPPVVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPLHL
PPGFLPPGPPPPITPPVSVPHTPAVNIPNSTATGGSEDTTKESSVGNPIPTVVSGGRGNA
ESTDTSKLYGTVPPPVAPTNVPAPVTQAVPLLGKCPPVNWDIVLDSSLGFELVPDLSGDP
ERDRHRDSEDRNRRSSGHRDRERDSRDRESRRDKEESRGKEKAEVTDRAEGDKNHESHGG
KTEGAELVSELAAGDAEPAGASAAPESAPEATSSLEQADKDTGSAAEAPR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaacgccttcaaccaagagctcttctcactgatggagatgaaacctcct
atttcccgagcaaagatgattctcatcacaaaagctgccattaaagctattaagctctac
aagcacgttgtccagattgtggagaagtttatcaaaaagtgcaagccggagtacaaagtg
ccgggcctgtacgtcatcgactccatcgtgcggcagtcccggcaccagttcggcaccgac
aaggacgtctttgggcccaggttctccaagaacatcactgccacattccagtatttgtat
ctgtgtccatctgaagacaagagtaaaatagttcgtgttctgaacctctggcagaaaaat
ggagtatttaaaattgaaatcattcagcctctcttggatatggcagcaggaaccagtgcc
actgcacccatggcagagaatgctactaacaatgaaggctcgccgccccctccggccaag
gttccctcggagccgccgccagtgaccccgaactcggtgcccgccgtgccgcagctgccc
agctccgacgccttcgcagccgtggcccagctgttccagacaacgcagggacagcagctg
cagcaaatcctgcagaccttccagcagcctcagaagccccagtcaccggtcatagacaac
actgtgatggctcaggttcaagctattactgctcagctaaaaaccacagcagcacagccc
ccagagcagaaagctgctttcacagcacctgagcagaaaacatcatttgacaaaaagctg
ctagatcggtttgactacgatgatgaaccagaagctgtggaagattctaagaaagaagat
tcagctccttcccctgcagtgtctcagccagctttgacctctctctcattcagtgcacag
gctggatggtgctcaatgccgggtgggtttccaggagaaggcatgcaacagccagtgttt
cctcagctccccaacatggatccatttcagcagcggatgatggggatgcagcaggatccg
atgcggcaccaggtgcctcttcctccgaatgggcagatgccaggctttggtctcctgcct
accccccagttcccacccatggctcagccagtgatgcctccagcagcaccagtgcagcca
actttccagtctcccttcccagtgcaggctgagccacacctgcagaaaccccaccagcag
gatatggaagtggaacagcctcccattcaggagggaaaacggcatgtttctgacagtagg
aaatcaagatctagatctgcatcaaggtcccccaagaggagacgctcgcagtcgggctcg
cgctcgcggcgctcccggcaccggcgctcccgctcgcgctcccgggagcggcgccggcgc
tcgcccaagtcccgctcgcaggagcggcgcgagcgcgagcgggagaaggagcgccgctcc
aaggggctgccccagatcaaggcagagactgtcagtgtttgcagtaccacactctgggtg
ggacagctggacaaaaggacaactcagcaggatgtgggaagtctcctggaggagtttggc
cccattgagtccatcaatatgataccgcccagaggatgtgcctacattgtcatggtgcac
agacaagatgccaacagagccctgcagaaactgagccgaggcaacttcaaagtcaaccag
aaatccatcaagattgcctgggctctgaataaaggaataaagccagactacaagcagtat
tgggatgtagaactgggtgtgacttacataccatgggacaaagtcaaacctgaagatctg
gaaagtttctgtgaaggaggaatgctggacaacgagacccttagtccagagtggaaggga
attcccaagaagtcagagaatgaagtggctcagaatggaggtgcagaagctgcccacaat
gaaccagtgtcacccattcccaaagctttacctgtcccaattcctgttcccatgcctgca
ccaataacagtacctcctccacaggttcccccccatccatcagggccccccgtggttggt
gcactccagcccccagctttcacagcacctttaggaattccccctcctggatttgccccc
ggggtgccgccgccgccgccgcctccgttcctccggccgggcttcaacccgctgcattta
cctccagggttccttcctcccgggccgccgcctcccataacccctccggtctctgtcccg
cacactccggcagtgaacatcccgaactctacagccactggtgggagcgaggacactaca
aaggagtcgtccgtaggaaatcccatcccaacagtagtgtctggaggcagagggaatgct
gaaagtactgacacttccaaactctatggcactgtcccacctcctgtagctcctaccaac
gtccctgctcctgtcacccaggctgttccactccttggtaagtgccctcctgtaaactgg
gatattgttctggacagttctttaggatttgagttggtgcctgatttgtcaggagacccc
gagcgcgaccggcacagggactcggaggacaggaacaggcgctccagcggccaccgagac
agggagagggattccagggatcgggagtcgcgcagagacaaggaggagagccgcggcaag
gagaaggcggaggtgacagacagggcggagggcgacaaaaaccacgagtcgcacggcggc
aaaacggagggcgcggaacttgtttcagaactggctgcgggagacgccgagcccgcaggc
gccagcgccgcgccggagtcagcgcccgaggctacctcatccctggaacaggcggacaag
gacacgggctcggcggccgaggcgccgcgctag
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