Zonotrichia albicollis (white-throated sparrow): 102071025
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Entry
102071025 CDS
T07911
Symbol
DDX31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zab01009
]
102071025 (DDX31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zab03009
]
102071025 (DDX31)
Enzymes [BR:
zab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102071025 (DDX31)
Protein phosphatases and associated proteins [BR:
zab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102071025 (DDX31)
Ribosome biogenesis [BR:
zab03009
]
Eukaryotic type
Pre-60S particles
Helicases
102071025 (DDX31)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Helicase_C_2
SecA_DEAD
FF
Motif
Other DBs
NCBI-GeneID:
102071025
NCBI-ProteinID:
XP_005494187
Ensembl:
ENSZALG00000015652
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MAAGVGMRGLGRQSGALKRKLQTPHGNPPVKRKRKLSTNTFRKGATEAGRREEGSSSQKP
VPKKQLNNKQNESQKNKPFIKTSSLFKNNPDIPEIHRKEVQQLQENVFTTDSFSQLDLHP
HLISTINTVLNICSMTSVQKQTIPVLLQGRDALVRSQTGSGKTLAYGIPLVQSLQGMESK
IQRSDGPYALVLVPTRELALQSFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINI
LISTPGRLVDHIRSTQCIHFRRTQWLIIDEADRILDLGFEKDVAVILNALNAERETRQNV
LLSATLTEGVTRLADISLNDPVSISIADEIQKVPEPAAQTDRKASSSSNCMEQENFAVPE
TLQQYVMVVPSKLRLVTLAAFILQKCKFEKRHKMIIFFSSCEQVEFYHELLANVLSGGPE
SEQPGHSPLSSVSLHFLRLHGDMEQEERTEVFQEFLKSKTGILLCTDVAARGLDLPQVTW
IVQYNAPASPAEYIHRIGRTARIGCRGSSLLVLAPSEAGYVSLLASHKINVSELKMEKVL
ATLMKDDRFRVHRPGSRKSCGKNPQEVRERATVLQTKFENLVHSSEGTVQWAKKALQSFL
CAYTTYPKELKHIFHIKSLHLGHVAKSFGLRDAPQNLTALPTAASKRKTKTKPKRSELLK
KTHSKRRLAELLCSEYSSGMDTAGAKVKKKKKKAEESWQPADSNISQALPVSVAVKAAGV
PQPGVRVTCQSS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgtggggatgcgcggcctcggcaggcaatctggtgctctgaaaaggaag
ctccagacaccacatggaaacccacccgtgaaacgaaaacgtaaattatccacaaacacc
ttcaggaagggtgccacggaggctggcaggagggaggagggaagctcatcacaaaaacct
gttcctaagaagcagctgaacaacaaacagaatgaaagccagaaaaacaaacctttcatc
aagacatccagcctgtttaaaaacaacccagacatcccagaaattcacagaaaagaagtg
cagcagctgcaagaaaatgttttcactacagattccttcagccagctggacctccaccca
cacctgatctccacaataaacactgtcctaaacatatgcagcatgaccagtgttcagaag
caaacgattcctgtgctcctgcaaggcagagatgctctggtgagatctcagactggttca
ggtaaaactcttgcctatggaattccacttgtgcagtctttgcaaggaatggaatccaaa
atacagcgcagtgatggcccctacgcgctcgtgctcgtcccaaccagggagcttgcactc
caaagttttgatacaatccagaaactacttaagccatttacctggattgtgcctggagtg
ctaatggggggagaaaagagaaaatcagaaaaagccaggttaaggaaagggatcaatatc
ctgatctccacccctggccgcctggttgatcacatcaggtccacacagtgcattcatttc
cgtcgcactcagtggctgatcatcgatgaggcagacaggatcctggacctgggctttgag
aaggatgtggctgtgatactgaatgctttaaatgctgagagagagacacgtcagaatgtg
ctgctctcagccaccctcactgaaggagtgacacgcctggctgatatcagcttgaatgac
cctgtcagcatttccatagcagatgaaatccagaaggtgcctgaaccagcagcacaaaca
gacaggaaagccagcagttcatcaaactgcatggagcaggaaaactttgctgttccagag
acactccagcagtatgtcatggtggtccccagcaaactgaggcttgtcacgttagcagct
tttatcctgcagaaatgcaagtttgaaaagcgccacaagatgatcatctttttctccagc
tgtgaacaagtggaattctaccatgagctccttgcaaatgtcctttcaggagggccagag
tcagagcaacctggacattcacccctctcctctgtgagcttgcattttctacgtctgcac
ggtgacatggaacaggaagaaaggacagaggtcttccaggaattcctaaaatccaagact
ggcatcttgctttgcactgatgtagcagcacgggggctggacctgcctcaagtgacctgg
attgtacagtacaacgctccggcttcacctgcggaatacatccaccggatcgggaggacg
gcgcgcatcggctgccgcgggagcagcctgctcgtgctggctccttcagaggcaggatat
gtcagcttgctggcttctcacaagattaatgtttcagagctgaagatggagaaggtgttg
gccaccctgatgaaggatgatcgcttcagggtgcacagaccagggagcaggaaatcctgt
ggcaagaaccctcaggaagtccgggagagagccacggtcctgcagacaaaatttgaaaat
ctcgtccactccagcgaggggactgtccagtgggccaagaaagcactgcagtctttcctt
tgtgcctataccacctatcccaaggagctcaagcacatcttccacatcaaatctctccac
ctgggtcatgtggccaagagctttgggctgagagatgccccccagaacctgactgctctt
ccaactgcagcctcaaagaggaaaaccaaaacaaagccaaaaaggtctgagctgctcaag
aagacccacagcaaacgtcgccttgctgagctcctgtgctctgaatattccagtgggatg
gacactgcaggagccaaggtcaagaagaagaagaaaaaagcagaggaaagctggcaacca
gcagattccaacataagccaggcccttccagtctccgtggctgtaaaagctgctggagtg
cctcagccgggggtcagggtgacctgccaaagcagctga
DBGET
integrated database retrieval system
