Zonotrichia albicollis (white-throated sparrow): 102071237
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Entry
102071237 CDS
T07911
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04137
Mitophagy - animal
zab04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102071237 (OPTN)
04137 Mitophagy - animal
102071237 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zab04131
]
102071237 (OPTN)
Membrane trafficking [BR:
zab04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102071237 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
102071237 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
102071237 (OPTN)
Xenophagy
Cargo receptors
102071237 (OPTN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
DUF6439
EDR4-like_1st
Motif
Other DBs
NCBI-GeneID:
102071237
NCBI-ProteinID:
XP_005489330
Ensembl:
ENSZALG00000012287
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MSSKSKGRPAENGEHSKSKMENGMDSMAAPALNTYTPEEMVQQMKELITENNELKEAMKL
HNQAMKDRYEELSTWREKQKEEREFYELKFKEAKQCLQAKCIENEQLQQQLQSLKEREEG
AEMEAPEKEVRQLKAQVQRLQAEKADLLAIISELQLKLNISAEDSFVEIGMNEGEINRTA
KEHQENSGEMPSDVAVYIRSKSADESKNLESEELTVSQLLCSLRNETQKREKLEEELQDH
RERLSKLEKETRNCQESGTQTEQEEESSEAVGSEVEALNLQVCALFKELQEAHEKLKEAE
LIQKKLQEKCQVLERKSLAAASELEEKQQLIYTIKKLELQVESMQAEVKLEQAKTHEEKT
RYNNLQDSYSKLLPELTEAKKKIDEMKLKELDRVDKAVVEQLTAKVELAEQALAAKQLQI
DEMKQLIAKQEEDLETMSVLRAQMEVYCSDFHAERAAREKIHEEKEQLAVQLAYLLKEQQ
NFEDLGRSSLAEMQSRHGARMPDGERSPRLVQRGTNSQDWPEQRNISIYACPKCEEILPD
LDTLQIHVMDCIN
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaagtcgaagggccgtcctgctgaaaatggagagcattccaagagtaaaatg
gaaaacggaatggacagcatggcagccccagcccttaacacctacaccccggaagagatg
gtgcaacagatgaaagaactaatcactgagaacaatgagttaaaagaagccatgaagttg
cacaaccaagctatgaaggaccgatatgaggaactttccacctggagagagaagcagaaa
gaagagcgagaattttatgagttaaagtttaaggaggcaaagcagtgcttgcaggccaag
tgcattgaaaatgaacagctacagcagcaacttcagagcctaaaggaaagagaagaagga
gctgaaatggaggctcccgagaaggaggtgaggcagctgaaggcccaggtgcagcggctc
caggctgagaaggcagatctgctcgccatcatttcagagctgcagctcaagctgaacatc
tcagcagaggattcctttgtggagattgggatgaatgaaggggaaataaatagaactgca
aaggaacatcaagagaatagtggtgaaatgcccagtgatgttgctgtctacatcaggagc
aaatctgcagatgaatcgaagaatttggagtctgaggagctaactgtgagccagctgctc
tgcagccttagaaatgaaactcagaagagggaaaaacttgaggaggagctgcaggatcac
agagagagactgtcaaagctggagaaggagaccagaaactgccaggagagtgggacacaa
actgaacaggaagaagagagttcagaagctgttggcagtgaagtagaagccctgaatctg
caagtttgtgctctgtttaaagagcttcaggaagcccatgagaagttaaaagaagcagaa
ttgattcagaagaagcttcaagaaaagtgccaggtactggaaagaaaaagcttggctgct
gcatcagaattggaggagaagcagcagctgatatacaccatcaagaagctggaactacag
gtggagagcatgcaggcagaggtcaagctggaacaagccaagacacatgaagaaaagaca
agatacaataacctccaggattcatatagcaagctccttccagaactcactgaggcaaag
aaaaaaattgatgaaatgaaactcaaagagctggacagagtagataaagctgtggtggaa
caactgacagcaaaggtggagttggcagaacaagcccttgctgcaaagcagctccagata
gatgaaatgaagcagctaattgctaagcaagaggaggaccttgaaactatgtctgtgctc
cgtgctcagatggaggtttattgttctgatttccatgctgagagggcagcaagagagaag
atccatgaggagaaggagcagttggctgtccagctggcatacctactaaaagagcaacaa
aattttgaagaccttggccgaagctctctggcagagatgcagagtcgccacggagccagg
atgccggatggggagcgctcacctcgccttgtccaaagaggaaccaatagtcaagactgg
ccagagcagcggaatatttctatttacgcatgccctaaatgtgaagaaattctacctgat
ttggacacactgcagattcatgttatggactgcattaattga
DBGET
integrated database retrieval system
