Zonotrichia albicollis (white-throated sparrow): 102071438
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Entry
102071438 CDS
T07911
Symbol
NFRKB
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102071438 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zab03036
]
102071438 (NFRKB)
Chromosome and associated proteins [BR:
zab03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
102071438 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
102071438
NCBI-ProteinID:
XP_005496396
Ensembl:
ENSZALG00000004316
LinkDB
All DBs
Position
Unknown
AA seq
1305 aa
AA seq
DB search
MESLDHMLTDPLELEGSCTRIMEDCMLGTSRVSLPEDLLEDPEIFFEVVSLSTWQEVLTD
EQQEHLKKFLPHFPENNREHQNKLISALFSGENFRFGNPLHIAQKLFRDGHFNPEVVKYR
QLCYKSQYKRYLSAQQQYFYRLLKQILASRNHLLELARKGGPDMTLRRKHFPPTYDSEER
DRRTHRRYLKILREVKEECGDTALSSDEEDLISWPPRSPARCSSPPVPLRVIPTLSTLDM
KTADKIELGESDLKMMLKKHHEKRKRQPDHPDLVTTDLTLEDIMTRVNAGRKGSLATLFD
LATLKKKVKDKEDKKKKKPKIIKSEVEDLADSLGNADGLPSMSQDFSPLPLSSVKEEPLE
DMKPCLEVNEISSSFFFLLLEILFLEGPAILSVLEDKVLDWQSSHASALNNWFSFAPNWS
ELVLPALQYLAGDSRDAPSSFSPFVEFKEKTQQWKLLGSYQDHEKELSALFHLWLETKDQ
TFFKENEDSSDAMPLPRVRTDYVVRPSTGEEKRVFQEQERYRYSQPHKAFTFRMHGFESV
VGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICELLKD
SQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFERIHHAQ
AAAAKAKKALQKPKPPAKMKSSSKEGTVKALPTSTADPSQLSLSDSSMPPTPVTPVTPTA
PALPATPISPPPVSAVSKSVSGAGSEPAKPSQSVLLVSSPTMPQLGTLLSPAQSSQAQPG
PAPTPCVVSHSSSSGLPQVRVVTAQSSLPTVSQQAPVVTQQQQQQQQQQQPTSVPQIRVP
ATATQTKVLPQAVMTLPVKAQSSPVQVPRAGSSMASQAGITVTGLPAVPSPAVKPVTSSP
GSSAASTSSTTIIQNMAGQNIIKQVAITGQLGVKTQAGSGIPLTATNFRIQGKDVLRLPP
SSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFTAAAGSSAGGKGISATLHVTSN
PVQTAESPAKTSTVSPASSSPAGGTVVKVTPDLKTAEPTSSAFRLMPALGMTVADQKSKA
ITTVASTEAKPAATIRIVQGLGVIPPKAGQTITVATHAKQVPSSSAVSIAGTGHTSLPTM
SATVSKAVAVASGTAGTPITIGTGATAVRQVPVSTTVVSTSQAGKLPARITVPLSVISQP
VKGKSVVTAPIIKGNIGANISGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQG
QATQVRIQTVPASHLQQGTVSGSTKAVSTVVVTTAPSPKQTQDQL
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggagtccctggatcacatgctcacagaccccctggagctggagggcagttgcacacgg
attatggaggactgcatgctgggcaccagccgggtcagtctgcctgaggacctcctggag
gatcctgagatcttctttgaggttgtcagcttgtcaacatggcaggaggtcctgacagat
gagcagcaagagcacctaaaaaagtttctgcctcacttccctgagaacaaccgagagcat
cagaacaaactcatctcagcgctgttcagtggggagaactttcggtttgggaacccgctg
cacatcgcccagaaactcttccgggatggacacttcaatcccgaggtggtgaagtaccgg
cagctctgttacaagtcgcagtacaagcgctacctgagtgcccagcagcagtacttctac
aggctgctcaagcagatcctcgcttcccgcaatcacttgctggaattagccaggaaagga
ggccctgacatgactctaaggagaaagcacttcccaccaacatacgactcggaagaacga
gacagacggacacatcggcgctacttgaagatcctgagggaagtgaaagaggagtgtgga
gacactgccttgtcttctgatgaagaagatctaatctcttggcctccacgctctccagca
cgttgttcaagtccaccagttcccctgagagtgatccccacgttgtcaaccttggacatg
aaaactgcagacaagatagaacttggagaaagtgatttaaagatgatgttgaagaagcac
cacgagaaacgaaaacgtcagcctgatcacccggatctagtcacgacagacctgaccctt
gaggacatcatgactcgagtgaacgctggcaggaaaggttccttagcaaccttatttgac
ctcgcaaccctcaagaaaaaggtgaaggacaaggaagataagaaaaaaaagaagccaaag
attattaaatctgaggtggaagatttggctgactctcttggcaatgcagatggactccca
tcaatgtctcaggatttttccccactccctctgtcatctgtcaaagaggaacctcttgaa
gatatgaagccatgccttgaagtaaatgaaatatcatccagcttctttttccttcttttg
gagatactctttctggaaggacctgctattctctctgtgcttgaagataaagttctggat
tggcaatcttctcatgccagtgcactaaataactggttctcctttgcccctaattggtct
gaattggttttacctgccttgcagtatttggcaggtgatagcagagatgctccttccagc
ttctcaccttttgttgaattcaaggagaaaactcagcagtggaaattgcttggtagttac
caagatcatgagaaggaactgtcagcactgtttcatctctggttggagaccaaagaccag
acttttttcaaagaaaatgaagacagctcagatgccatgccactgcccagagtaaggact
gactatgtagtccggcctagcactggagaggagaaacgggtgtttcaagagcaagagcgt
taccgttacagccagccccacaaagccttcaccttccggatgcatggctttgagtcggtt
gttggtcctgtgaagggagtgtttgacaaggaaacctccttaaacaaagcccgggaacat
tctctcctgcgctcagacagaccagcatatgtcaccattttatctcttgttcgtgatgct
gctgctcgccttcctaatggagagggaactcgagctgaaatctgtgagctgctcaaagat
tcccagttcctagctccagatgttacaagtgctcaggttaacactgttgttagtggtgct
ctggaccgattgcattatgagaaagatccctgtgtgaaatacgatattgggcggaagttg
tggatttacctgcaccgggacaggagcgaggaagagtttgaacggatccatcatgctcaa
gctgctgcagcaaaggccaagaaagctcttcagaagccaaaacctccagctaaaatgaag
tcgagtagtaaggagggtactgtgaaagccctccccaccagcacagcagatcctagtcag
ctgagcctcagtgactccagcatgccaccaactcctgtgactcccgtgacaccaactgcc
cctgcattgccagcaacacccatctcacccccaccggtgtcggcagtcagcaagagtgta
tctggtgctgggtcagagccagcaaaacccagccagagcgttcttctggtgtcttctccc
accatgccccagctggggacattgctgtccccagctcagagctcacaggcacagccaggg
ccagcgcccaccccttgtgtggtcagtcacagcagctcctcaggcctgccacaggtccgt
gtggtcactgcccaatccagcctcccaactgtgtcccagcaagccccagtggtcacccag
cagcagcagcagcagcagcagcagcagcagcccacgtcagtgcctcaaatccgtgttcca
gctacagccacacaaaccaaagtgctccctcaggctgtgatgactctgcctgtaaaagct
caaagtagccctgtgcaggtgccaagagcaggaagctccatggccagccaggcaggtatc
actgtgacggggctgcctgcagtgcccagccctgctgtgaagccagtgaccagctctcca
ggcagttctgctgccagcacctcctccaccactatcattcagaacatggctggccagaac
atcatcaagcaggtggctattacaggacagcttggtgtgaagacccaggctggaagtggc
attccactcacagcaaccaattttcggatccaagggaaggatgtgttgcgcctgccccca
tcctccatcaccacggacgcaaagggacaaacagtgctgcgcatcactccagatatgatg
gccaccctggccaagtctcaagtcactactgtcaaactgactcaggacctcttcacagca
gctgcgggaagcagtgctggtgggaaaggcatctctgcgactttgcacgtgacatccaac
cctgtccagactgctgagtctccagccaagacaagcacagtgtctcctgcctcttccagc
ccagccggaggcactgtggttaaagtgactcctgacttaaagactgcagagccaacaagt
tctgctttccgcctgatgcctgccctgggcatgactgtggcagatcagaagagcaaagcc
ataaccacggtggcatccacggaggccaagccagctgccactatcagaattgtgcagggg
ctgggtgtgataccccccaaagctgggcagaccatcacggtagccactcatgctaagcag
gtgccctcgtcctcggcagtgagcattgctggcacaggccacacctccttacccaccatg
agtgccacagtgtccaaagcagttgccgtggcctcaggaactgcaggaacccccatcacc
attggtacaggagccacggctgtgcggcaggtgcccgtcagcaccacagtggtatctaca
tcccaggcaggcaaacttccagcacggatcacagtacccctgtcagtgatcagccagcca
gtgaagggcaagagcgtggtcactgcccccatcatcaagggcaacattggcgccaacatc
agtggattaggcagaaatatcattctgactacaatgccagcagggactaaactgattgct
gggaacaagcctgtgagttttctgactgcacagcaactacagcagctgcagcagcaaggc
caagccacacaggtgcgaattcaaacagttccagcctcccatctccagcaaggaacagtc
tctggctcaactaaagcagtgtccactgtggttgtgacaacagctccatctccaaagcag
actcaggatcagctgtga
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