KEGG   Zonotrichia albicollis (white-throated sparrow): 102071491
Entry
102071491         CDS       T07911                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
zab  Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:zab00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:zab01009]
    102071491 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zab03036]
    102071491 (KDM5B)
Enzymes [BR:zab01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     102071491 (KDM5B)
Protein phosphatases and associated proteins [BR:zab01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102071491 (KDM5B)
Chromosome and associated proteins [BR:zab03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102071491 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 PHDvar_NSD PHD_5 CFAP410_C zf-PHD-like
Other DBs
NCBI-GeneID: 102071491
NCBI-ProteinID: XP_005492541
Ensembl: ENSZALG00000015580
LinkDB
Position
Unknown
AA seq 1521 aa
MAEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLH
FTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVAEQGG
FDVVCKERKWTKIATRMGFAPGKAVGSHIRAHYERILYPYNLFQSGASLLCLQKPDLSSD
TKDKEYKPHDIPQRQSVPPSESCPPARRAKRLSPEATNVKSETDPPEARTHNLRRRMGCA
PPKSEGDKEMRGVVKLPEKKELSGEPEKDKSKARSKKPTNAVDLYVCLLCGSGNDEDRLL
LCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECNKPQEAFGFEQAARDYTLRTFGEM
ADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRGGKF
KVRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWS
YSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHG
VPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLNRYC
VFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEEEKRLREKVDKLGVTDSERVTFELF
PDDERQCLKCKTTCFMSAVYCPCKPGLLVCLYHVEDLCSCPTYKYKLGYRYTLEELYPMM
NALKMRAESYNEWASNVSEALEAKINNKKSLISFKALIEESEMKKFPDNDLLRHLRLVTQ
DADKCASVAQQLLNGKRQTRYRSGGGKCQNQLTVNELRLFVRQLYALPCVLSQTPLLKDL
LDRVETFQQQSQKLLSEEMPSAAELQELLDVSFDFDVELPQLPELRARLEQARWLEDVQL
ACSEHSSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ
SLSSLAAAVKELEEIPAYLPNGAALKDAVQKAKDWLQEVEALQAGGRVPVLDTLVELVSR
GRSLPVHLEQLPRLEALVAEVQAWKECAANTFLCENSPYSLLEVLCPWCDIGMLSLKRKQ
KKLKEPVPSGKKKSTKLETLSDLERALSESKDTASAMATLGEARLREMEALRALRAANEL
KVLASEEDAELKVCLCQKEPAAPMIQCELCRGFFHTGCVPVPGAAPGPRVWLCPQCRRSE
KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKRIQDKVGSG
LLYSRWQGSAGQLPETNKVSQTIGAMSFSMPHDWDNRTMYLHSPFSTGQHCIPLHVVSTE
LDELMMEAQLLQVSLPEIQELYQALFTKQSPALQPEQRSPSTATADKSECCRGKKDGMSY
MERKLKRRFERETFCGEKRARVKKMRTPKKKKLKLSHSKDLCSNKLERERERLLDLQRCS
DSHLLPSDTSFSEQEDSEDEDAICPAVNCLQPEGDEVDWVQCDGSCNQWFHQVCVGISPE
MAEKEDYICASCAGKDAQGRK
NT seq 4566 nt   +upstreamnt  +downstreamnt
atggccgagttcctgcccccgcccgagtgccccgtcttcgagcccagctgggaggagttc
gccgaccccttcgccttcatccacaagatccggcccatcgccgagcagaccggcatctgc
aaggtgcggccgccgccggactggcagcctccgttcgcgtgcgatgtggacaagcttcac
ttcacaccaaggatccagaggctcaatgaactggaggctcaaactcgtgtaaagctgaat
tttctggatcagattgcaaagttttgggagcttcaaggatgcacactgaaaattccacat
gtggagaggaagatcttggatttatttcagcttaacagactagttgcagaacaaggagga
tttgatgtggtttgcaaggagagaaaatggaccaaaatagccacgaggatgggctttgct
cctggcaaggccgtgggctcgcacatccgcgcgcattacgagcgaattctctacccctac
aacctgttccagtcaggggccagtctcttgtgcttgcagaagccagatctgagcagtgac
acgaaggacaaggagtacaagccccacgacatcccccagcgacagtcggtgccaccctcg
gagagctgcccgcccgcccggcgcgccaagcgcctgagccccgaggcaaccaatgttaaa
agtgagactgaccctccagaagccagaactcacaatctgagacgcagaatgggctgtgcc
cctccaaagagtgaaggtgacaaggaaatgcgcggtgtggtgaagctccctgagaagaaa
gaactttctggggagccagagaaggacaaatccaaagccagatctaaaaaacccaccaat
gctgtggatctgtatgtgtgtctcctgtgtggcagtgggaacgatgaggacaggctcctg
ctgtgtgatggctgtgatgacagttaccacaccttctgtttaattccacctctccatgat
gttcccaaaggggactggaggtgtccccagtgtctggctcaggagtgtaacaaacctcag
gaagcctttgggtttgagcaagcagcacgagactacaccctgcgcacgttcggggaaatg
gccgatgccttcaagtcagactattttaacatgccagtacatatggtccccactgagctg
gttgaaaaagaattttggagacttgtcagtaccattgaagaggatgtgacagtggagtac
ggagctgacattgcttcaaaggaatttggcagtggcttccctgttagaggtgggaagttt
aaagttagaccagaagaagaggaataccttgatagtggctggaatttaaacaacatgcct
gtgatggagcagtctgtgcttgctcacatcactgcagacatctgtgggatgaaactgccc
tggctgtacgtaggaatgtgcttttcctcattttgttggcatatagaagaccattggagc
tattccattaactatctgcattggggggagcctaaaacgtggtatggagccccagggtac
gcagctgagcagctggaggatgtaatgaagaaacttgctccagagctatttgagtcccag
ccagatctcttgcaccaacttgtcaccataatgaacccgaacactttgatggcccacggg
gtgcctgtgtacagaaccaaccagtgtgcaggggagtttgttatcacctttcccagagct
taccacagcggcttcaaccagggcttcaactttgctgaagctgtgaacttctgcaccgtg
gactggctgcccctgggccggcagtgtgtggagcattaccggctgctcaaccgctactgc
gtcttctcccacgacgagatgatctgtaagatggcttccaaagcagatgtcctggacgtt
gtggtggcatctacagtccagaaagacatggctattatgattgaagaggagaagaggttg
cgtgagaaggttgataaactgggagtgactgactcagagagggtgacgtttgagctgttc
cctgacgatgagcgacagtgcctgaagtgtaaaaccacctgcttcatgtcagcagtttat
tgtccctgcaaacctgggctcttggtgtgcttgtaccacgttgaggacctctgctcctgt
cccacctacaaatacaaactggggtaccgctacaccctggaggagctgtacccgatgatg
aacgcgctcaagatgcgcgccgagtcctacaacgagtgggcttccaacgtcagcgaggcc
ctggaggcaaagatcaacaacaaaaaaagtctcatcagtttcaaggctttgatagaagaa
tcagaaatgaaaaagttcccagacaatgacctgctgcgacacctccggctggtgacacag
gacgcagacaaatgtgcctcggtggcccagcagctgttgaatggcaagagacagaccagg
taccgctccgggggagggaagtgccagaaccagctgacggtgaacgagctgcggctcttc
gtgaggcagctctacgccctgccctgtgtcctcagccagacaccactgctgaaggatctc
cttgaccgtgtggaaactttccaacagcaaagccaaaagctcctttctgaggagatgccc
agcgctgcggagctgcaggagctgctggacgtcagctttgactttgatgtggagctgccg
cagctgccggagctgcgggcgcggctggagcaggcgcgctggctggaggacgtgcagctg
gcctgctccgagcacagctccctcaccctggacgacatgaggcgcctcatcgactccggc
gtggggctcgcgccctaccccgctgtggagaaggccatggccaagctgcaggagctgctc
accgtgtccgagcactgggatgacaaagccaggaacctgataaaggccaggccccggcag
tccctgagcagcctggcagcagcagtgaaggagctggaggagatcccagcctacctccca
aacggagcagcactgaaggatgccgtgcagaaggccaaggactggctgcaggaggtggag
gctctgcaggctgggggccgtgtgcccgtgctggacacgctggtggagctcgtctcaagg
ggccgctccctccccgtgcacctggagcagctgcccaggctggaggccctggtggctgaa
gtgcaggcctggaaggagtgtgcagcaaacaccttcctgtgtgagaactcgccgtattcc
cttctggaggtgttgtgtccctggtgtgacatcgggatgctcagtctcaagaggaagcag
aagaagctgaaggagccagtgccaagtggcaagaagaaaagcactaagctggagacactg
agtgacctggagcgggcactctctgaaagcaaggacactgcatctgcaatggccacgctg
ggggaggcgcggctgagggagatggaggcgctgcgtgccctgcgagcggccaacgagctg
aaggtgctggcgagcgaggaggacgccgagctcaaggtgtgtctgtgccagaaggagccg
gctgctcccatgatccagtgtgagctctgcaggggtttcttccacacgggctgcgtgccc
gtgcccggcgccgcgccggggccgcgcgtgtggctgtgcccgcagtgccggcgctccgag
aagccgccgctggagaagatcctgccgctgctggcgtccctgcagcgcatccgcgtgcgg
ctgcccgagggcgacgccctgcgctacatgatcgagagaactgtgaactggcagcacaga
gcacaacaaatgttgtattcagggaatctaaaacgcatccaggacaaagttggctcagga
ttactgtacagcaggtggcaaggctcggcgggacagctgccggagacaaacaaggtgtca
cagacaattggggcaatgtcattctccatgcctcatgactgggataacagaaccatgtat
ttgcattctccattctctacaggacagcactgcatcccacttcatgtggttagcaccgag
ctggacgagctgatgatggaagcccagctgctgcaggtttctctgcccgagatccaggag
ctctaccaggccctgttcacaaagcagagcccagccctgcagccagagcagaggtcaccc
agcacagccacagcagacaagagcgagtgttgccgagggaagaaggacggcatgagttac
atggagagaaagctgaagcggcgttttgagagagagaccttctgtggtgagaagagagcg
agagtaaaaaagatgagaacacccaaaaagaagaaactgaaactgagtcactcaaaggat
ctgtgcagtaacaaactggagcgagagcgggagcggctcctggacctgcagcgttgcagt
gacagccacctgctgccctcagacacgtccttctctgagcaggaggactctgaggatgag
gatgccatctgcccagctgtgaactgcctccagcccgagggggatgaggtcgactgggtc
cagtgtgatggcagctgcaaccagtggttccaccaggtgtgtgtgggcatctcccccgag
atggcagagaaggaggattacatctgtgccagctgcgccggcaaggacgcccagggccgc
aagtga

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