Zonotrichia albicollis (white-throated sparrow): 102071797
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Entry
102071797 CDS
T07911
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102071797 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zab03009
]
102071797 (REXO1)
Ribosome biogenesis [BR:
zab03009
]
Eukaryotic type
Pre-60S particles
RNases
102071797 (REXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
TIL
Motif
Other DBs
NCBI-GeneID:
102071797
NCBI-ProteinID:
XP_014129047
LinkDB
All DBs
Position
Unknown
AA seq
1230 aa
AA seq
DB search
MLRSTGYFRGIDCPFLNAGGSGPGRGCRRPYCHFRHPPVAPAPCGASGASGDPSVGLPLG
RGAERGYDPYNPELPRPSLEVEDGFLADITDVTPGILELELVNKAIEAVKNEVEREQKKY
EELLETTKEFGASEGSSLISNTPVPAAGPQSDSFASLEYNPGSYNFNNNSDYNPTPLAAA
ARSSKYTLDSSRAKGSSLEYVPKAVVQNKKYSSTVTNNKYVIDDSKPSTDLEYDPLSNYS
ARLLGKGTTKGSKRDRASDYEDSYSPSRKKLCEDPDDDEVLARFSSSEDEAEVEYKTASG
SSPSKAGSESESNESSSKEQSTKLEGSASQGSKEAAQHKENLPNSQKNLAKNSSDKNSKA
AKLCSGKNNKEIENKNKDSKDKTKKKKIDVSKATGLSEAGKKEKNKNADKDKVLKKEEKL
KTKNEEKNCKDRSVKVKTDGNLKKPEKHKSEKVDGCKKEKSKSSSSSSGKSKSEGVTKGT
EKVGSSKKDPQSKTADVKNGKESSGRKNKEKGTKSSLERKKDKVTCAGQGDPKKGQKQQS
LSHVDLFGDESGDEDDRGRPLSSSLLDVSSDLDGADSGSASDSDRDRTKKAKRSKLSKSS
SSSSTSDDIDYSILEKDVDFESDPMEECLRIFNESKDVKTEDKGRLGKQPSKEEANEEKT
EDNLTTLFPGQKRRISHLVKQGNAETPSRPVVRPYRPPTAQEVCYQRIQLAQQQAAQLVG
AAQKTSLCLPGEKRRIAHVPNAALTAAAKQSLGSSKAAVGGRSVTPSNDSEASTLPLKPC
TLAGMASKTTSTIVPKRVAHVPSLQSTTLQRPVIPTEFGAKVPTNIRQRYLNLFIDECLK
FCSSSQEAFDKALAEEKVAYERSTSRNIYLNVAVNTLKKLRSLVPNSPASTNKTSNKKVV
SHEAVLGGKLAAKTSFTLNRSGSLRAEDLTGAALYRRLKEYLMTEEQLKENGYPMPHPEK
AGRAVLYTAEEKKVTDSSCRICCRCGTEYVVSASGSCIRREECVHHWGRLRKQRVPGGWE
THYSCCSGAVGSPGCQVAKQHVHDGRKESLDGFVKTFEKLPTTDGYPGIYALDCEMCYTK
QGLELTRVTVINSELKVVYDTFVKPDSKVVDYNTRFSGVTEEDLENTSITLRDVQAVLLN
MFSADTILIGHSLESDLFALKLIHGTVVDTAIVFPHRLGLPYKRALRTLMADYLKRIIQD
NVEGHDSSEDARACMELMVWKIKEDAKVKR
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgctcagatccaccggctacttccgcggcatcgactgcccgttcctcaacgccgggggg
tcggggccgggccgggggtgccgcaggccctactgccatttccgccaccccccggtggcc
ccggcgccgtgcggagcctccggagcctcaggcgaccccagcgtggggctcccgctcgga
cgcggcgcagagcgaggctatgatccctacaaccctgagctgcccaggccctccctggag
gtggaggatggctttctggctgacatcacagatgtcacccctggaattctggagctggag
ctggtcaacaaggccattgaggcagtgaagaacgaagtggagagggagcagaagaagtac
gaggagctgctggaaaccacgaaggagtttggtgcttcagagggctcctccctcatttca
aacacacctgtgccagctgctgggcctcagagtgattcctttgcctccttggagtacaat
ccagggagctacaacttcaataacaactcagactacaaccccactcctctggctgctgct
gcccgctccagtaaatacactttggattcctcccgcgccaagggcagctcgctggagtac
gtccccaaggctgtggtgcagaataaaaaatacagcagcactgtcaccaacaacaaatat
gtgattgatgactccaagccttccacagacttggaatatgaccccctttccaattactct
gccaggctgttgggcaaaggcacaaccaaggggtccaaaagggacagagcctctgattat
gaggattcctactctccatcaaggaagaagctctgtgaagatcctgatgatgatgaggtg
ttggccaggttctcctcctctgaagatgaggctgaggtggaatataaaacagcttctggt
agttcaccctccaaagctggttcagagagtgagtcaaatgagtcctccagcaaagagcag
agcacaaaattggaaggctctgcttcccaggggagcaaagaagcagcacagcacaaggag
aaccttccaaattcacagaaaaaccttgccaagaactcatcagacaagaactcaaaggca
gcaaagttgtgttctggtaagaacaacaaggaaattgaaaataaaaacaaagactccaaa
gacaaaacaaaaaagaagaaaattgatgttagtaaagcaacaggcctcagtgaggctggg
aagaaggagaaaaataaaaatgcagacaaagacaaagtgctcaagaaagaagaaaaatta
aaaactaagaatgaagagaaaaactgcaaagacagaagcgtcaaagtgaaaacagatggg
aacttgaaaaaacctgaaaaacacaagtcagaaaaggtggatgggtgtaagaaagaaaaa
tccaagtccagcagcagcagttcagggaaaagcaagagcgagggtgtcaccaagggcaca
gagaaagtggggagcagcaagaaggatcctcagagcaaaactgctgatgtgaaaaatggc
aaggaaagctctggtcgaaaaaacaaggagaaagggaccaagagctccctggagagaaag
aaggacaaggtcacttgtgcaggacaaggagaccccaagaagggtcagaagcagcagagt
ttgagtcacgtggacctgtttggggatgagagtggagatgaggatgacagagggcggcct
ttgtcctcctcactgcttgatgtgagctcagacttggatggggctgactctggctcagcc
tctgacagtgacagggacaggacaaagaaagcaaagcgctccaagctgtccaagtcgtca
tcatcctcctctacatctgatgacattgattattccatccttgagaaagatgtggacttt
gagtcagatcccatggaggagtgtctcaggatctttaatgaatctaaagatgtaaaaact
gaagacaagggaaggctgggcaagcagccatccaaagaggaagcaaatgaagaaaagaca
gaagataatttaactaccttgtttcctggccaaaaaagaaggatctctcatcttgtcaaa
caaggaaatgcagagaccccgagcaggccggtggtgcggccctaccgtccccccacggcc
caggaggtgtgttaccagaggatccagctggctcagcagcaggcagcacagctggttggg
gctgctcaaaagacctctctctgtttgccaggagaaaagaggaggattgctcacgtgcca
aatgcagccctcaccgcagcggccaagcaaagccttgggagcagcaaggcagctgttggt
ggcaggagtgtcacaccttccaatgactctgaagcctccacccttcctctgaagccttgc
actttggctgggatggcttccaagaccaccagcaccatcgtgcccaaaagggtagcacat
gttccctccttacagagcaccactttacagaggcctgttattcccacagagtttggtgct
aaagtcccaaccaacattcgccagaggtatctcaatctcttcattgatgagtgcctgaaa
ttctgctcctcctcccaggaagctttcgacaaggccctggcagaggagaaggtggcctac
gagcgcagcaccagccgcaacatctacctgaacgtggctgtgaacaccctgaagaagctc
cgcagcctcgtgcccaactccccagccagcaccaacaagacaagcaacaagaaggtggtg
tcccacgaggctgtgctgggagggaagcttgctgccaagaccagcttcaccctgaaccgc
tcagggagcctgagagccgaggatctgacaggagctgccctgtaccggcgcctcaaggag
tacctgatgactgaggagcagctcaaggagaatgggtacccaatgcctcaccctgagaag
gctggacgggctgtgctctacactgcagaggagaagaaagtcactgactcctcgtgcagg
atctgctgccgctgtggcaccgagtacgtggtgtcggcctcggggagctgcatccgccgg
gaggagtgcgtgcaccactgggggcggctgcgcaagcagagagtgccaggtgggtgggaa
actcactacagctgctgctctggagctgtggggtcaccaggctgccaggttgctaaacaa
cacgtgcacgatgggcgcaaggagagcctggatggttttgtcaagacttttgagaagctg
cccacaactgatggctaccctgggatctatgccttagactgtgaaatgtgctacactaag
caaggactggagctgacaagagtgactgtgatcaactcagagctgaaggtggtgtatgac
acctttgtcaagccagactccaaggtggtggattacaacaccaggttctcaggtgtgaca
gaagaggacctggagaacacgagcatcaccctgcgggatgtccaagccgtcctcctgaac
atgttcagtgcagacaccattctgatagggcacagcttggaaagcgacttatttgcacta
aagctgatccatggcactgtggtggacacagccatcgtgttcccccaccgcctggggctg
ccctacaagcgggcgctgcgcacgctgatggccgactacctcaaacgcatcatccaggac
aatgtggaaggacacgactccagtgaggatgccagagcctgcatggagctgatggtgtgg
aagatcaaagaggatgccaaggtgaagcgatga
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integrated database retrieval system
