Zonotrichia albicollis (white-throated sparrow): 102071817
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Entry
102071817 CDS
T07911
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102071817 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zab03400
]
102071817 (UIMC1)
DNA repair and recombination proteins [BR:
zab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
102071817 (UIMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAP80_UIM
UIM
Rad50_zn_hook
Zn-C2H2_12
Motif
Other DBs
NCBI-GeneID:
102071817
NCBI-ProteinID:
XP_005483796
Ensembl:
ENSZALG00000010560
UniProt:
A0A8D2MTI4
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MPRRKKPAEGLESRGQDEEEEEEEKKNPASARKKRSFVDAFIVISDSDGEQEPKEESGLQ
KKRTKQLDRTKFAAKRKIAQMTEEEQFALALKMSEQEARQVNCQEEEEEELLRKAIAESL
SSCQPSDSSTASPHLSVEALDSQGPSQPAEREGSELLGGLAFCPDTPPSDCSSHSQSSRA
DGNGQMDVARSPLVVLRRLSQEIVESSLVSSIIVSPGKGQPVTRSSEKPSSPAESDSSNM
LPSTLGGDFMSLSPTLGKVASGGSWRLTPRRLFSSPSSSSEAAGHEPKEQLLPCTGHSAG
EAGAGSSATPLWKSRTTEQCDSPRRSGGGAGTKHSSQPGHTAKVCVSTEQAEQNEGSGST
PDLSMLSVEEKHKQEEARNTVHYYWGIPFCPKGVDPNQYTKVILCQLEVYQKSLKQAQRQ
LLHKKEFGNPVVPSPSLSQNELGKGEEIGRENGVADGTEDGDTEGQESENINWLHPSKRR
EAESPGHSMEEDKNSTSDDEPTTSYCQPSQVLPAEDVPEDGEPMQIAQSISTMTPLGSKR
NPDTATENSAEEEISVCPETQPSPLEAIQEREELCSDSRGAPMQVGGDEDAGRAVSEYSP
AAAGPVSCPLCDHSFPAEEIEVHAMYCDGAAQPQPAQDAPVLTRRQREARNKAASGKSSP
PSSDFDKCEKCYLCKSLVPLLQYQRHVDSCLQAARQAQGTRRLRRAKDTGRQEGGLLRML
ELSESKSEGADAGSPLTGLGDQHSSPTLSAADGEPSADSPISLQHLPFHGSPAKPGISLE
AMDAVVDSEPCTALRAGSQHRPRGCRRRRRKF
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaggaagaagcctgcagagggcctggagtctcgaggtcaggatgaagaggaa
gaggaggaagagaagaagaacccagccagtgccaggaagaagcgcagttttgtggatgca
tttattgttatatccgacagtgatggagagcaggagccaaaggaagagagtggcttgcaa
aagaagagaacaaagcagctggatcgaacaaagtttgctgctaaaagaaaaattgcacag
atgactgaagaggaacaatttgcactggccctgaaaatgagtgagcaagaggctagacaa
gtgaactgtcaggaagaggaagaggaggagctcttgaggaaggccattgctgagagcctt
agcagctgtcagccctcagactcatcgactgcatctcctcatctgtcagtggaagcactg
gattcacagggcccaagccagcctgctgagagagaaggctctgagctcctgggaggcctg
gcattctgccctgacacccctccctctgactgcagctcccactcacagagctccagagct
gatgggaatggacagatggatgtcgcccggagccccttggtagtgttgaggaggttgagc
caggaaatcgttgaaagctcactagtatccagcataatcgtgtctccggggaagggccag
cctgtgacaaggtcaagtgaaaagccttcctcaccagcagaaagtgattcgagtaacatg
ttacccagcactctgggaggggacttcatgtctttgagtcccacccttggcaaggtggct
tcaggaggctcctggcgactcacacctcggagactgttcagcagcccctccagctcttct
gaggcagcaggccacgaaccaaaagagcagctcctgccctgcactggccattctgcagga
gaagctggtgctgggagctcagccactccactctggaagagcaggaccacagaacagtgt
gacagccccaggaggagtggtggaggagcaggtaccaaacacagctcacagcctgggcac
actgccaaggtctgtgtttccacagagcaagcagagcagaatgaggggtctggcagtacc
ccagatctttccatgctgtctgtggaggaaaagcacaaacaggaggaggcaagaaacaca
gtgcactattactggggcatccccttctgccccaaaggggtggaccccaaccagtacacc
aaagtcatcttgtgtcagctggaggtttaccagaagagcctgaagcaggctcagaggcag
ctgttgcataagaaggagtttggtaacccggttgtgcccagtccttccttgagccaaaac
gagcttgggaaaggagaagagataggcagggagaatggggttgctgatggtacagaagat
ggagacacagaaggacaagagtctgaaaacatcaactggctccacccttcaaagaggagg
gaggcagagagtccagggcacagcatggaagaagataagaactccacttctgatgatgaa
ccgaccaccagctactgccagccctcccaggtactgcctgcagaggatgtgcctgaagat
ggggaacccatgcaaattgcacagagcatctccacaatgaccccacttggcagtaaaagg
aacccagatactgccacagaaaactcagctgaagaagagatctctgtttgcccagagaca
cagccaagcccactggaagctattcaggagagagaagagctctgttcagacagcagaggt
gcaccaatgcaggttggtggcgatgaagacgctggcagggctgtgtctgagtacagtcct
gcagctgctggccctgtgtcgtgccctctgtgtgaccacagcttcccagctgaggagatc
gaggtgcacgccatgtactgcgatggcgcggcgcagccgcagcctgcccaggacgctcca
gtgctcacccggcgtcagagagaggcaagaaataaagctgccagtggtaaaagcagccca
ccatcctcagactttgacaagtgtgagaagtgctacctctgtaagtcactggtgccactg
ctgcagtatcagaggcacgtggacagctgccttcaggctgctaggcaagctcagggaacc
aggaggctgcgaagagccaaggacactggaaggcaggagggaggactcctcaggatgctg
gagctctccgagagcaaatctgaaggtgctgacgcggggagtcccctcactggattagga
gaccagcactcctctcccacgctctcagccgctgatggggagccgtcagcagacagcccc
atctcccttcagcacctccctttccatggctcccctgccaaacccggcatctccttggaa
gccatggatgccgtggtggactcggagccatgcacggctctccgtgcaggcagccagcac
cggcccagaggctgccgccggagaaggcgcaagttctga
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