Zonotrichia albicollis (white-throated sparrow): 102071869
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Entry
102071869 CDS
T07911
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102071869 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zab03000
]
102071869 (CNOT4)
03019 Messenger RNA biogenesis [BR:
zab03019
]
102071869 (CNOT4)
04121 Ubiquitin system [BR:
zab04121
]
102071869 (CNOT4)
Enzymes [BR:
zab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102071869 (CNOT4)
Transcription factors [BR:
zab03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
102071869 (CNOT4)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102071869 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102071869 (CNOT4)
Ubiquitin system [BR:
zab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102071869 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
Torus
DZR_2
Nup35_RRM_2
zf-CCCH_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
102071869
NCBI-ProteinID:
XP_005480782
Ensembl:
ENSZALG00000010696
UniProt:
A0A8D2MWZ9
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGTVDKNKNKVTALQRPNSNNKDAWPSLQSSSKSANGLTMEHRKT
PPILENGTDPEHMTPDGADSDFGPIDKPSDSLSIGNGDSSQQITNSDTPSPPPGLTKPNP
VIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSDWPTAPEPQ
SLFTSETIPVSSSTDWQAAFGFGSSKQQEDDLGFDPFDITRKALADLIEKELSVQDQPSL
SPTSLQNPTPHTTTAKGPGSGFLHPAAPTNANSLSSTFPVMPQRFPQFQQHRAVYNSFSF
PGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHSTGLGGIPISDNSSSVESL
NMKEWQDGLRALLPNININFGGLPNASSPSNANHSVPTSNTATTDSLNWDSPGSWMDPAI
ITGIPASTGNSLDTLQDDNPPHWLKSLQALTEVDGPSAAPSQTHHSNPFGTQIPLHRASW
NPYSPPSNPTSFHSPPPGFQTAFRPPSKTPTDLLQSSALDRH
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagccctgacgctaaggaagaccctgtggaatgccctctttgcatggagcct
ctggaaattgatgacatcaatttcttcccttgcacctgtgggtaccaaatctgtcgtttc
tgttggcatcgcattcgcactgatgagaatggactttgtcctgcttgcagaaagccatat
ccagaagatccagcagtgtacaaaccactctcccaggaagagctgcagaggataaaaaat
gaaaagaaacagaaacaaaacgagaggaaacagaagatatcagagaatcgcaaacatttg
gccagtgtacgggttgtacagaagaaccttgtcttcgtggtagggctgtctcagcgccta
gcagatccagaggttttgaaacgaccagaatattttgggaagtttggtaaaatacataaa
gttgtcattaataacagcacatcatatgcaggctcacagggtccaagtgccagtgcatat
gtaacctacatccggtcagaagatgccctcagagccatacagtgcgtcaataacgtggtg
gtagacggcagaacacttaaggcatcattaggtacaacaaaatattgcagttattttcta
aaaaatatgcagtgtccaaaaccagactgcatgtatctacatgagctaggtgatgaagca
gccagtttcacaaaagaagaaatgcaggcgggtaagcaccaggaatatgaacagaaacta
ctgcaagaattatacaaactaaaccccaactttctccaattatctacgggtacagttgac
aagaacaagaacaaagtgacagcactgcagagacccaacagtaataacaaagatgcctgg
ccatcattacagagttcaagtaaatcggccaacggtttaacaatggaacacaggaaaacg
cctcctatattagaaaatggcacagacccagaacacatgactccagatggtgcagactca
gatttcggccctatcgataaaccttcagattccctcagtataggaaatggtgacagctct
cagcagataacaaacagtgacacaccttcaccaccacctggtttaacaaaacccaatcca
gttatacccatcagttcatctaatcacagtgcacggtctccttttgaaggggctgtaaca
gaatcacagtcactcttctctgacaacttccggcacccaaaccccatccccagtgggctt
cctccattccccagctctccacagacttcgagtgactggcccacagcaccagaaccacag
agcctcttcacatcagaaactataccagtatcctcctccacagactggcaagcagctttt
gggtttggttcctccaaacagcaagaggacgacttagggtttgatccctttgacatcacc
cgcaaagccttagcagacctgattgagaaggaactgtcagtccaagaccaaccttccctt
tcgcccacatctcttcagaaccctaccccacacactacaactgccaaagggccaggttct
ggattcctgcatcctgctgcacccacaaatgccaactctctcagtagcacctttccagtc
atgccacagaggtttccacagtttcaacagcatcgagcagtttacaactccttcagtttt
ccaggccaagcagctcgctatccttggatggccttcccacgaaatagcatcatgcacttg
aaccacacagcaaatcccacctcaaatagtaatttcttggacttgaatctcccaccacaa
cacagcacaggtctgggagggatccctatatcagacaacagcagttctgtagagagttta
aatatgaaggaatggcaggacgggctaagggcacttctaccgaacattaacatcaacttt
ggtggactgcccaatgcttcctccccctccaacgccaaccacagtgtaccaacgtccaac
actgccaccaccgacagcctgaattgggacagccctggcagctggatggaccccgcaatc
atcacaggtatcccagcctccacaggaaacagtttagacactcttcaagatgacaatcct
ccacattggctaaaatctcttcaggccctcacagaggtggacggccccagtgcagcgcca
tcacagacacaccacagtaaccccttcggcacacagatccctctgcacagagccagttgg
aatccctactctcctccttcaaaccccaccagcttccattccccacctccaggctttcag
acagccttcagaccccccagtaaaacccccacagatctactacagagctcagcgctggat
cgtcattag
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